Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0142
(322 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0256 - 19465636-19466709,19467649-19467765,19468168-194682... 50 5e-07
02_01_0722 + 5405550-5405810,5406654-5407399,5407575-5408046,540... 36 0.005
06_01_0571 - 4038319-4040877,4040962-4041012 35 0.012
03_02_0579 - 9606317-9606892,9607571-9607799,9607902-9608011,960... 35 0.012
12_02_1263 + 27423411-27423464,27423985-27424104,27424200-274242... 35 0.016
08_01_0877 - 8607790-8608083,8608174-8608356,8608495-8608665,860... 35 0.016
07_01_0659 + 4946937-4946990,4947579-4947698,4947820-4947918,494... 35 0.016
05_01_0154 + 1020650-1022050,1022304-1022373,1022496-1022617,102... 35 0.016
04_04_1427 + 33491847-33491888,33493504-33493623,33493740-334939... 35 0.016
03_01_0006 + 65675-65808,66385-66457,68290-68526,68648-68785,688... 35 0.016
04_03_0535 - 16850704-16853001,16854055-16854115,16854228-168543... 34 0.022
03_05_0742 + 27310404-27310457,27311281-27311286,27311350-273114... 34 0.029
04_04_0754 + 27803143-27803517,27805441-27806832,27806910-278071... 33 0.038
08_02_1063 + 24024030-24024506,24024803-24024856,24024965-240251... 32 0.087
05_03_0497 - 14715267-14715548,14715648-14715830,14715911-147166... 32 0.087
02_05_1079 + 33950290-33950337,33950418-33952586,33952690-339527... 32 0.087
04_04_1073 - 30606472-30606515,30606897-30606988,30607152-306072... 32 0.12
08_02_1257 - 25646029-25646054,25646139-25646236,25646609-256467... 31 0.15
03_01_0594 - 4385291-4385503,4385647-4385829,4385944-4386117,438... 31 0.20
03_05_1014 - 29687343-29687410,29688054-29688191,29689246-296892... 30 0.35
10_08_0019 - 14167952-14171059 30 0.47
03_01_0549 - 4102098-4102198,4102394-4102544,4102629-4102760,410... 30 0.47
02_01_0570 - 4195409-4195443,4196245-4196333,4196539-4196630,419... 30 0.47
03_05_0325 + 23135816-23135894,23136161-23136333,23136440-231366... 29 0.81
11_04_0160 + 14247463-14247584,14247710-14247923,14250099-142502... 29 1.1
10_07_0176 - 13826764-13827064,13827271-13827377,13827474-138278... 27 2.5
04_04_1624 - 34849385-34849410,34849748-34851052,34852121-348522... 26 5.7
>05_04_0256 -
19465636-19466709,19467649-19467765,19468168-19468279,
19469019-19469167,19469378-19469449,19469544-19469609,
19471945-19472073,19474539-19474647,19475225-19475304,
19475408-19475533,19475607-19475657,19475738-19475920,
19476019-19476105,19476184-19476294,19476692-19476796,
19477513-19477678,19477769-19477941,19478022-19478094,
19479472-19479655,19479759-19480203
Length = 1203
Score = 49.6 bits (113), Expect = 5e-07
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = +3
Query: 12 VFARMSSDQKQQLIVEYQALGYYVGMCGDGANDCGALRAAHCG 140
VFAR++ +QK+ ++ ++ +G MCGDG ND GAL+ AH G
Sbjct: 808 VFARVAPEQKELVLTTFKTVGRVTLMCGDGTNDVGALKQAHVG 850
Score = 31.1 bits (67), Expect = 0.20
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +3
Query: 180 FTARELSAAPRL--LREGRAALATSFGLFKFMVGYSLTEFFSVAFLY 314
FTA+ S AP L +R+GR+ L T+ +FK + L + ++ +Y
Sbjct: 948 FTAKHASVAPTLDIIRQGRSTLVTTLQMFKILGLNCLATAYVLSVMY 994
>02_01_0722 +
5405550-5405810,5406654-5407399,5407575-5408046,
5408129-5408296,5408301-5408418,5408845-5409056,
5409165-5409287,5409395-5409880,5409976-5410401
Length = 1003
Score = 36.3 bits (80), Expect = 0.005
Identities = 20/45 (44%), Positives = 23/45 (51%)
Frame = +3
Query: 6 GAVFARMSSDQKQQLIVEYQALGYYVGMCGDGANDCGALRAAHCG 140
G VFA + K + I + Q G V M GDG ND AL AA G
Sbjct: 843 GTVFAEIDPVGKAEKIKDLQMKGLTVAMVGDGINDSPALAAADVG 887
>06_01_0571 - 4038319-4040877,4040962-4041012
Length = 869
Score = 35.1 bits (77), Expect = 0.012
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +3
Query: 15 FARMSSDQKQQLIVEYQALGYYVGMCGDGANDCGALRAAHCG 140
FA + + K +++ Q + + GM GDG ND AL+ A G
Sbjct: 563 FAGVFPEHKYEIVKRLQEMSHICGMTGDGVNDAPALKKADIG 604
>03_02_0579 -
9606317-9606892,9607571-9607799,9607902-9608011,
9608898-9609275,9609380-9609658,9610044-9610168,
9610269-9610335,9610582-9612006
Length = 1062
Score = 35.1 bits (77), Expect = 0.012
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +3
Query: 6 GAVFARMSSDQKQQLIVEYQALGYYVGMCGDGANDCGALRAAHCG 140
G +F+R KQ+++ + G V M GDG ND AL+ A G
Sbjct: 705 GLLFSRAEPKHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG 749
>12_02_1263 +
27423411-27423464,27423985-27424104,27424200-27424298,
27424405-27424542,27424647-27424706,27424865-27425044,
27425132-27425338,27425415-27425534,27425609-27425728,
27425819-27425941,27426074-27426178,27426379-27426523,
27426967-27427131,27427228-27427466,27427553-27427585,
27427894-27427975,27428100-27428260,27428422-27428607,
27428700-27428882,27428969-27429147,27429386-27429482
Length = 931
Score = 34.7 bits (76), Expect = 0.016
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +3
Query: 15 FARMSSDQKQQLIVEYQALGYYVGMCGDGANDCGALRAAHCG 140
FA + + K +++ QA + GM GDG ND AL+ A G
Sbjct: 540 FAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 581
>08_01_0877 -
8607790-8608083,8608174-8608356,8608495-8608665,
8608765-8608925,8609012-8609093,8609197-8609229,
8609359-8609597,8609686-8609850,8609955-8610204,
8610314-8611414,8611841-8611960,8612626-8612691
Length = 954
Score = 34.7 bits (76), Expect = 0.016
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 15 FARMSSDQKQQLIVEYQALGYYVGMCGDGANDCGALRAAHCG 140
FA + + K +++ + Q + + GM GDG ND AL+ A G
Sbjct: 562 FAGVFPEHKYEIVKKLQEMKHICGMTGDGVNDAPALKRADIG 603
>07_01_0659 +
4946937-4946990,4947579-4947698,4947820-4947918,
4948038-4948175,4948268-4948402,4948501-4948609,
4948735-4948976,4949061-4949180,4949272-4949391,
4949477-4949599,4949708-4949812,4949896-4950040,
4950337-4950501,4950621-4950859,4950939-4950971,
4951082-4951163,4951314-4951474,4951566-4951751,
4951877-4952059,4952166-4952347,4952461-4952557
Length = 945
Score = 34.7 bits (76), Expect = 0.016
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +3
Query: 15 FARMSSDQKQQLIVEYQALGYYVGMCGDGANDCGALRAAHCG 140
FA + + K +++ QA + GM GDG ND AL+ A G
Sbjct: 553 FAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 594
>05_01_0154 +
1020650-1022050,1022304-1022373,1022496-1022617,
1022753-1023031,1023402-1023779,1024079-1024188,
1024394-1024622,1024725-1025303
Length = 1055
Score = 34.7 bits (76), Expect = 0.016
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +3
Query: 6 GAVFARMSSDQKQQLIVEYQALGYYVGMCGDGANDCGALRAAHCG 140
G +F+R KQ+++ + G V M GDG ND AL+ A G
Sbjct: 697 GLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG 741
>04_04_1427 +
33491847-33491888,33493504-33493623,33493740-33493976,
33494754-33495638,33495733-33495837,33495920-33496064,
33496146-33496310,33496391-33496629,33496724-33496756,
33496840-33496921,33497017-33497177,33497282-33497455,
33497549-33497731,33497832-33498019,33498155-33498251
Length = 951
Score = 34.7 bits (76), Expect = 0.016
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +3
Query: 15 FARMSSDQKQQLIVEYQALGYYVGMCGDGANDCGALRAAHCG 140
FA + + K +++ Q + VGM GDG ND AL+ A G
Sbjct: 561 FAGVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPALKKADIG 602
>03_01_0006 +
65675-65808,66385-66457,68290-68526,68648-68785,
68871-69005,69131-69310,69495-69701,69821-69943,
70240-70359,70758-70880,72067-72171,72254-72398,
73443-73607,73669-73907,74452-74484,74977-75058,
75200-75360,75739-75951,76789-76971,77051-77220,
77375-77474
Length = 1021
Score = 34.7 bits (76), Expect = 0.016
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +3
Query: 15 FARMSSDQKQQLIVEYQALGYYVGMCGDGANDCGALRAAHCG 140
FA + + K +++ QA + GM GDG ND AL+ A G
Sbjct: 623 FAGVFPEHKYEIVQRLQARKHICGMTGDGVNDAPALKKADIG 664
>04_03_0535 -
16850704-16853001,16854055-16854115,16854228-16854323,
16854394-16854521,16855016-16855067,16855182-16855274,
16855473-16855590,16856456-16856609,16857512-16857643,
16859136-16859216,16859353-16859507,16860118-16860343,
16860423-16860507,16860593-16860689,16861785-16861949,
16862046-16862121,16863041-16863103,16863193-16863359,
16863495-16863669,16863743-16863835,16864694-16864810,
16865589-16865778,16866092-16866126
Length = 1618
Score = 34.3 bits (75), Expect = 0.022
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +3
Query: 3 RGAVFARMSSDQKQQLIVEYQALGYYVGMCGDGANDCGALRAAHCG 140
R A+ RM+ QK QL+ +++GY GDG ND ++ A+ G
Sbjct: 605 RTAICCRMTPLQKAQLVGLLKSVGYLTLAIGDGGNDVRMIQEANIG 650
>03_05_0742 +
27310404-27310457,27311281-27311286,27311350-27311469,
27311597-27311695,27311787-27311795,27311843-27311980,
27312084-27312218,27312308-27312517,27312592-27312798,
27312891-27313010,27313079-27313198,27313279-27313401,
27313501-27313605,27313764-27313908,27314658-27315148,
27315236-27315268,27315556-27315637,27315747-27315907,
27316021-27316206,27316294-27316476,27316573-27316751,
27317009-27317105
Length = 1000
Score = 33.9 bits (74), Expect = 0.029
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 30 SDQKQQLIVEYQALGYYVGMCGDGANDCGALRAAHCG 140
S+ K +++ QA + GM GDG ND AL+ A G
Sbjct: 614 SEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 650
>04_04_0754 +
27803143-27803517,27805441-27806832,27806910-27807164,
27807246-27807368,27807643-27808119,27808217-27808603
Length = 1002
Score = 33.5 bits (73), Expect = 0.038
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +3
Query: 18 ARMSSDQKQQLIVEYQALGYYVGMCGDGANDCGALRAAHCG 140
A +QK + + E Q+ G V M GDG ND AL +A G
Sbjct: 859 AEAKPEQKAEKVKELQSAGRTVAMVGDGINDSPALVSADVG 899
>08_02_1063 +
24024030-24024506,24024803-24024856,24024965-24025118,
24025314-24025388,24025511-24025788,24026023-24026253,
24026522-24026620,24026740-24026889,24027830-24027976,
24028525-24028575,24028647-24028819,24029018-24029147,
24029361-24029458,24029655-24029892,24030634-24030837,
24031003-24031083,24031296-24031535
Length = 959
Score = 32.3 bits (70), Expect = 0.087
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = +3
Query: 12 VFARMSSDQKQQLIVEYQALGYYVGMCGDGANDCGALRAAHCG 140
V A + +K+ I E Q V M GDG ND AL +A G
Sbjct: 786 VIAEVKPHEKKSFISELQKEHKLVAMVGDGINDAAALASADVG 828
>05_03_0497 -
14715267-14715548,14715648-14715830,14715911-14716668,
14716762-14717167,14717274-14717399,14717506-14717625,
14717675-14718463,14718554-14718709,14718800-14718898,
14718989-14719108,14719165-14719251
Length = 1041
Score = 32.3 bits (70), Expect = 0.087
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 15 FARMSSDQKQQLIVEYQALGYYVGMCGDGANDCGALRAAHCG 140
FA + + K +++ Q + GM GDG ND AL+ A G
Sbjct: 629 FAGVFPEHKYEIVRRLQERKHICGMTGDGVNDAPALKKADIG 670
>02_05_1079 +
33950290-33950337,33950418-33952586,33952690-33952780,
33952955-33953435,33954249-33954345
Length = 961
Score = 32.3 bits (70), Expect = 0.087
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 15 FARMSSDQKQQLIVEYQALGYYVGMCGDGANDCGALRAAHCG 140
FA + + K +++ Q + GM GDG ND AL+ A G
Sbjct: 562 FAGVFPEHKYEIVKRLQDRKHICGMTGDGVNDAPALKKADIG 603
>04_04_1073 -
30606472-30606515,30606897-30606988,30607152-30607243,
30607362-30607469,30607614-30607748,30607826-30607871,
30608320-30608420,30608512-30608649,30608721-30608819,
30608920-30609036,30609941-30610102,30610271-30610330,
30611120-30611216,30611238-30611296,30611364-30611480,
30611922-30612020,30612115-30612180,30612405-30612542,
30612659-30612742,30612820-30612892,30612937-30612992,
30613074-30613182,30613253-30613335,30613406-30613489,
30613679-30613750,30613827-30613904,30613984-30614067,
30614142-30614212,30614497-30614566,30614866-30614955,
30615046-30615177,30615250-30615350,30615634-30615691,
30615762-30615878,30617981-30618133
Length = 1094
Score = 31.9 bits (69), Expect = 0.12
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +3
Query: 9 AVFARMSSDQKQQLIVEYQALGYYVGMCGDGANDCGALRAAHCG 140
+V R S + K L+ + G+ V + GDG ND AL A G
Sbjct: 771 SVMGRSSPNDKLLLVKALRKRGHVVAVTGDGTNDAPALHEADIG 814
>08_02_1257 -
25646029-25646054,25646139-25646236,25646609-25646700,
25646786-25646893,25647212-25647346,25647648-25647752,
25647951-25648088,25648865-25648963,25649079-25649195,
25649446-25649610,25649955-25650014,25650395-25650559,
25650636-25650746,25651220-25651333,25651466-25651531,
25651857-25651994,25652303-25652386,25652468-25652510,
25652621-25652676,25652772-25652880,25652944-25653026,
25653127-25653210,25653383-25653454,25653557-25653634,
25653717-25653800,25653892-25653962,25654095-25654164,
25654314-25654403,25654500-25654661,25654702-25654817,
25654946-25654988,25655069-25655185,25655897-25656046
Length = 1082
Score = 31.5 bits (68), Expect = 0.15
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 12 VFARMSSDQKQQLIVEYQALGYYVGMCGDGANDCGALRAAHCG 140
V R S + K L+ + G+ V + GDG ND AL A G
Sbjct: 778 VMGRSSPNDKLLLVQALKRKGHVVAVTGDGTNDAPALHEADIG 820
>03_01_0594 -
4385291-4385503,4385647-4385829,4385944-4386117,
4386213-4386373,4386470-4386551,4386626-4386658,
4386755-4387161,4387237-4387381,4387483-4387587,
4387704-4387826,4387908-4388027,4388118-4388237,
4388569-4388775,4388857-4389036,4389151-4389285,
4389382-4389519,4389630-4389728,4389832-4389951,
4390029-4390091
Length = 935
Score = 31.1 bits (67), Expect = 0.20
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 15 FARMSSDQKQQLIVEYQALGYYV-GMCGDGANDCGALRAAHCG 140
FA + + K +++ Q G +V GM GDG ND AL+ A G
Sbjct: 568 FAGVFPEHKYEIVRMIQGGGGHVCGMTGDGVNDAPALKKADIG 610
>03_05_1014 -
29687343-29687410,29688054-29688191,29689246-29689294,
29689623-29689728,29690184-29690332,29690840-29690921,
29691308-29691360,29691644-29691729,29691855-29691909,
29692179-29692579,29693564-29693660,29694191-29694322,
29694426-29694476,29694659-29694751,29694917-29694992,
29695711-29695856,29696009-29696043,29696056-29696107,
29696290-29696401,29696617-29696813,29697456-29697560,
29697667-29697819,29698317-29698424,29698608-29698752,
29699374-29699432,29701397-29701441,29701677-29701730,
29701901-29702113,29702873-29702958,29704492-29704572,
29704670-29704729,29705599-29705644,29706212-29706286,
29706376-29706512,29708306-29708366,29708726-29708743,
29709710-29709743,29709811-29709902,29709997-29710029
Length = 1260
Score = 30.3 bits (65), Expect = 0.35
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +3
Query: 21 RMSSDQKQQLIVEYQALGYYVGMCGDGANDCGALRAAHCG 140
R+ K+ L+ Q V M GDG ND AL+ A G
Sbjct: 722 RVEPSHKRMLVEALQLHNEVVAMTGDGVNDAPALKKADIG 761
>10_08_0019 - 14167952-14171059
Length = 1035
Score = 29.9 bits (64), Expect = 0.47
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 12 VFARMSSDQKQQLIVEYQALGYYVGMCGDGANDCGALRAAHCG 140
V AR K L+ + G+ V + GDG ND AL+ A G
Sbjct: 733 VMARSLPLDKLVLVQRLKQKGHVVAVTGDGTNDAPALKEADVG 775
>03_01_0549 -
4102098-4102198,4102394-4102544,4102629-4102760,
4102988-4103162,4103494-4103945,4104042-4104121,
4104342-4104408,4104709-4104814,4104924-4105033,
4105133-4105201,4105661-4105771,4106263-4106427,
4106639-4106725,4106974-4107027,4107101-4107240,
4107820-4107897,4108066-4108720
Length = 910
Score = 29.9 bits (64), Expect = 0.47
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +3
Query: 24 MSSDQKQQLIVEYQALGYYVGMCGDGANDCGALRAAHCG 140
++ +K +I Q G V M GDG ND +L AA G
Sbjct: 762 LTPHEKAGIITALQGEGRRVAMVGDGINDAPSLAAADVG 800
>02_01_0570 -
4195409-4195443,4196245-4196333,4196539-4196630,
4196726-4196833,4196984-4197118,4197211-4197256,
4197358-4197458,4198285-4198422,4198503-4198601,
4198740-4198856,4199195-4199356,4199734-4199793,
4200371-4200538,4200608-4200718,4201401-4201499,
4201579-4201644,4202407-4202490,4202563-4202605,
4202684-4202739,4202817-4202925,4203442-4203524,
4203842-4203925,4204311-4204382,4204462-4204539,
4204633-4204716,4204806-4204876,4205943-4206012,
4206495-4206626,4207168-4207284,4208185-4208367
Length = 963
Score = 29.9 bits (64), Expect = 0.47
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +3
Query: 9 AVFARMSSDQKQQLIVEYQALGYYVGMCGDGANDCGALRAAHCG 140
+V R S K L+ + G V + GDG ND AL A G
Sbjct: 644 SVMGRSSPSDKLLLVKALKKKGNVVAVTGDGTNDAPALHEADIG 687
>03_05_0325 + 23135816-23135894,23136161-23136333,23136440-23136613,
23136881-23137004,23137090-23137190,23137337-23137423,
23137801-23137896,23138209-23138329,23138475-23138603,
23139458-23139549,23139660-23139771,23140189-23140541,
23140670-23140899,23141179-23141278,23143357-23143411,
23143548-23145496,23145587-23145745,23146514-23146685,
23146758-23147056,23147246-23147521
Length = 1626
Score = 29.1 bits (62), Expect = 0.81
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +3
Query: 12 VFARMSSDQKQQLIVEYQ-ALGYYVGMCGDGANDCGALRAAHCG 140
V AR S K L+ + A V + GDG ND ALR A G
Sbjct: 1326 VLARSSPLDKHTLVKHLRTAFNEVVAVTGDGTNDAPALREADIG 1369
>11_04_0160 +
14247463-14247584,14247710-14247923,14250099-14250215,
14251578-14251670,14251748-14251922,14252981-14253017,
14253842-14253875,14254212-14254481,14255768-14255872,
14256295-14256392,14256474-14256616,14257197-14257290,
14257378-14257487,14258018-14258172,14258252-14258332,
14258415-14258535,14259358-14259464,14259537-14259668,
14261105-14261258,14264094-14264211,14264344-14264517,
14264831-14264882,14265450-14265577,14265670-14265820,
14265904-14266242
Length = 1107
Score = 28.7 bits (61), Expect = 1.1
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 9 AVFARMSSDQKQQLIVEYQALGYYVGMCGDGANDCGALRAAHCG 140
A+ R++ QK QL+ ++ Y GDG ND ++ A G
Sbjct: 724 AICCRVTPSQKAQLVKLLKSCDYRTLAIGDGGNDVRMIQQADIG 767
>10_07_0176 -
13826764-13827064,13827271-13827377,13827474-13827836,
13827912-13828079,13828153-13828374,13828784-13829023,
13829640-13829719,13829853-13830018,13830720-13830783,
13830861-13830962,13831085-13831227,13831370-13831474,
13831551-13831706,13832125-13832241,13832315-13832392,
13832466-13832550,13833334-13833455,13833546-13833611,
13835190-13835284,13835427-13835523,13835873-13835983,
13836083-13836164,13836292-13836353,13836620-13836685,
13838002-13838232
Length = 1142
Score = 27.5 bits (58), Expect = 2.5
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 12 VFARMSSDQKQQLIVEYQALGYYVGMC-GDGANDCGALRAAHCG 140
V R+S QK Q+ + + + + GDGAND ++AAH G
Sbjct: 745 VCCRVSPLQKAQVASLVKKGAHKITLSIGDGANDVSMIQAAHVG 788
>04_04_1624 - 34849385-34849410,34849748-34851052,34852121-34852294,
34852386-34852456,34852563-34852618,34853047-34853185,
34853310-34853695,34853801-34853851,34853936-34854021,
34854112-34854553,34856241-34856315,34856457-34856593,
34856679-34856838,34856917-34857012,34857093-34857247,
34857900-34858032
Length = 1163
Score = 26.2 bits (55), Expect = 5.7
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 87 MCGDGANDCGALRA 128
+CG G DCGA+RA
Sbjct: 1097 VCGQGGIDCGAIRA 1110
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,806,112
Number of Sequences: 37544
Number of extensions: 47204
Number of successful extensions: 231
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 231
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 411066120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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