Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0140
         (683 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010113-1|AAQ22582.1| 1022|Drosophila melanogaster GH03748p pro...    29   4.5  
AE014298-2332|AAF48567.2| 1520|Drosophila melanogaster CG9216-PC...    29   4.5  
AE014298-2331|AAF48565.1| 1520|Drosophila melanogaster CG9216-PA...    29   4.5  
AE014134-358|AAF51289.1|   77|Drosophila melanogaster CG15386-PA...    29   5.9  

>BT010113-1|AAQ22582.1| 1022|Drosophila melanogaster GH03748p
           protein.
          Length = 1022

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 5/105 (4%)
 Frame = +3

Query: 324 KNSSTRPKSVGRRGQTVSSGIYRTGEMSIAIRATFWVVTFGTIGYALFTLVKPDDELLKK 503
           KN S   KS   R QT +     T E+   ++ + +V T+     A F +  P      K
Sbjct: 172 KNESNTRKSKINRTQTQTDDFVTTEEV---LKQSKYVKTYIKNPDAYF-VYDPSVLARLK 227

Query: 504 FDEHSKNTDARKLSKQTIEQL---KEAA--NQNSELNQKIQALLK 623
            +E  + T      KQT+++    K+A   NQN   NQK Q L+K
Sbjct: 228 LEELKETTGKLPKRKQTLKETRTGKQARHQNQNPNQNQKAQQLIK 272


>AE014298-2332|AAF48567.2| 1520|Drosophila melanogaster CG9216-PC,
           isoform C protein.
          Length = 1520

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 5/105 (4%)
 Frame = +3

Query: 324 KNSSTRPKSVGRRGQTVSSGIYRTGEMSIAIRATFWVVTFGTIGYALFTLVKPDDELLKK 503
           KN S   KS   R QT +     T E+   ++ + +V T+     A F +  P      K
Sbjct: 172 KNESNTRKSKINRTQTQTDDFVTTEEV---LKQSKYVKTYIKNPDAYF-VYDPSVLARLK 227

Query: 504 FDEHSKNTDARKLSKQTIEQL---KEAA--NQNSELNQKIQALLK 623
            +E  + T      KQT+++    K+A   NQN   NQK Q L+K
Sbjct: 228 LEELKETTGKLPKRKQTLKETRTGKQARHQNQNPNQNQKAQQLIK 272


>AE014298-2331|AAF48565.1| 1520|Drosophila melanogaster CG9216-PA,
           isoform A protein.
          Length = 1520

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 5/105 (4%)
 Frame = +3

Query: 324 KNSSTRPKSVGRRGQTVSSGIYRTGEMSIAIRATFWVVTFGTIGYALFTLVKPDDELLKK 503
           KN S   KS   R QT +     T E+   ++ + +V T+     A F +  P      K
Sbjct: 172 KNESNTRKSKINRTQTQTDDFVTTEEV---LKQSKYVKTYIKNPDAYF-VYDPSVLARLK 227

Query: 504 FDEHSKNTDARKLSKQTIEQL---KEAA--NQNSELNQKIQALLK 623
            +E  + T      KQT+++    K+A   NQN   NQK Q L+K
Sbjct: 228 LEELKETTGKLPKRKQTLKETRTGKQARHQNQNPNQNQKAQQLIK 272


>AE014134-358|AAF51289.1|   77|Drosophila melanogaster CG15386-PA
           protein.
          Length = 77

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = +3

Query: 417 RATFWVVTFGTIGYALFTLVKPDDELLKKFDEHSKNT 527
           ++  W++ FG +GY L  L +P+ + L++      +T
Sbjct: 8   KSVLWLIGFGGMGYGLMVLTEPNVDKLERIKASVSST 44


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,420,245
Number of Sequences: 53049
Number of extensions: 569419
Number of successful extensions: 1429
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1429
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)