Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0139
         (616 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78066-7|CAE48544.1|  570|Caenorhabditis elegans Hypothetical pr...    69   4e-12
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr...    69   4e-12
Z78066-8|CAE48546.1|  204|Caenorhabditis elegans Hypothetical pr...    65   4e-11
Z78066-5|CAB01523.1|  222|Caenorhabditis elegans Hypothetical pr...    65   4e-11
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr...    65   4e-11
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr...    62   2e-10
Z83230-6|CAB05746.1|  336|Caenorhabditis elegans Hypothetical pr...    29   2.0  

>Z78066-7|CAE48544.1|  570|Caenorhabditis elegans Hypothetical
           protein W06A7.3d protein.
          Length = 570

 Score = 68.5 bits (160), Expect = 4e-12
 Identities = 39/155 (25%), Positives = 66/155 (42%)
 Frame = +2

Query: 152 AWFDPQRLHPEVESLIYWRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 331
           AW D + + P V  +IYWR+                                        
Sbjct: 364 AWIDFKTVPPCVLDVIYWRDAKKSAIVLSLALLVLFVLAKYPLLTVVTYSLLLALGAAAG 423

Query: 332 FRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVE 511
           FR++K V   ++KT+  HPF  +L  ++++                     +L++L  VE
Sbjct: 424 FRVFKKVEAQIKKTDSEHPFSEILAQDLTLPQEKVHAQADVFVEHATCIANKLKKLVFVE 483

Query: 512 DLVDSLKFGVLLWCLTYVGACFNGITLIILGWIAL 616
             ++S+KFG++LW LTY+ + F+G TL ILG + +
Sbjct: 484 SPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGV 518


>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical protein
            W06A7.3c protein.
          Length = 2484

 Score = 68.5 bits (160), Expect = 4e-12
 Identities = 39/155 (25%), Positives = 66/155 (42%)
 Frame = +2

Query: 152  AWFDPQRLHPEVESLIYWRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 331
            AW D + + P V  +IYWR+                                        
Sbjct: 2278 AWIDFKTVPPCVLDVIYWRDAKKSAIVLSLALLVLFVLAKYPLLTVVTYSLLLALGAAAG 2337

Query: 332  FRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVE 511
            FR++K V   ++KT+  HPF  +L  ++++                     +L++L  VE
Sbjct: 2338 FRVFKKVEAQIKKTDSEHPFSEILAQDLTLPQEKVHAQADVFVEHATCIANKLKKLVFVE 2397

Query: 512  DLVDSLKFGVLLWCLTYVGACFNGITLIILGWIAL 616
              ++S+KFG++LW LTY+ + F+G TL ILG + +
Sbjct: 2398 SPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGV 2432


>Z78066-8|CAE48546.1|  204|Caenorhabditis elegans Hypothetical
           protein W06A7.3e protein.
          Length = 204

 Score = 64.9 bits (151), Expect = 4e-11
 Identities = 30/95 (31%), Positives = 53/95 (55%)
 Frame = +2

Query: 332 FRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVE 511
           FR++K V   ++KT+  HPF  +L  ++++                     +L++L  VE
Sbjct: 58  FRVFKKVEAQIKKTDSEHPFSEILAQDLTLPQEKVHAQADVFVEHATCIANKLKKLVFVE 117

Query: 512 DLVDSLKFGVLLWCLTYVGACFNGITLIILGWIAL 616
             ++S+KFG++LW LTY+ + F+G TL ILG + +
Sbjct: 118 SPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGV 152


>Z78066-5|CAB01523.1|  222|Caenorhabditis elegans Hypothetical
           protein W06A7.3b protein.
          Length = 222

 Score = 64.9 bits (151), Expect = 4e-11
 Identities = 30/95 (31%), Positives = 53/95 (55%)
 Frame = +2

Query: 332 FRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVE 511
           FR++K V   ++KT+  HPF  +L  ++++                     +L++L  VE
Sbjct: 76  FRVFKKVEAQIKKTDSEHPFSEILAQDLTLPQEKVHAQADVFVEHATCIANKLKKLVFVE 135

Query: 512 DLVDSLKFGVLLWCLTYVGACFNGITLIILGWIAL 616
             ++S+KFG++LW LTY+ + F+G TL ILG + +
Sbjct: 136 SPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGV 170


>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical protein
            W06A7.3a protein.
          Length = 2607

 Score = 64.9 bits (151), Expect = 4e-11
 Identities = 30/95 (31%), Positives = 53/95 (55%)
 Frame = +2

Query: 332  FRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVE 511
            FR++K V   ++KT+  HPF  +L  ++++                     +L++L  VE
Sbjct: 2461 FRVFKKVEAQIKKTDSEHPFSEILAQDLTLPQEKVHAQADVFVEHATCIANKLKKLVFVE 2520

Query: 512  DLVDSLKFGVLLWCLTYVGACFNGITLIILGWIAL 616
              ++S+KFG++LW LTY+ + F+G TL ILG + +
Sbjct: 2521 SPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGV 2555


>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical protein
            W06A7.3f protein.
          Length = 2488

 Score = 62.5 bits (145), Expect = 2e-10
 Identities = 29/95 (30%), Positives = 52/95 (54%)
 Frame = +2

Query: 332  FRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVE 511
            F ++K V   ++KT+  HPF  +L  ++++                     +L++L  VE
Sbjct: 2342 FSVFKKVEAQIKKTDSEHPFSEILAQDLTLPQEKVHAQADVFVEHATCIANKLKKLVFVE 2401

Query: 512  DLVDSLKFGVLLWCLTYVGACFNGITLIILGWIAL 616
              ++S+KFG++LW LTY+ + F+G TL ILG + +
Sbjct: 2402 SPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGV 2436


>Z83230-6|CAB05746.1|  336|Caenorhabditis elegans Hypothetical
           protein F56A8.6 protein.
          Length = 336

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = -1

Query: 616 QRYPTEDDERDPVEARPHVREAPQQHAELQRVHQVLHQ 503
           Q+Y     ++ PV+ RP V++  Q H E Q+  ++L Q
Sbjct: 267 QQYKPPPQQQPPVQMRPPVQQPQQNHQEEQQNAELLMQ 304


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,835,368
Number of Sequences: 27780
Number of extensions: 140245
Number of successful extensions: 475
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 466
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)