Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0138
(317 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0366 - 13102147-13102281,13102560-13102739,13102791-131029... 32 0.085
11_06_0411 - 23230580-23230795,23231407-23231862,23232142-232321... 30 0.34
08_02_1291 + 25930056-25930067,25930289-25930334,25930434-259305... 29 0.60
07_03_0809 - 21669632-21669637,21669871-21670131,21670573-216707... 28 1.4
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677... 28 1.4
09_04_0031 + 13946692-13946774,13947007-13948012 27 2.4
09_04_0190 - 15443764-15443838,15445360-15445458,15446396-154468... 27 3.2
09_04_0028 - 13928542-13929538,13929736-13929818 27 3.2
06_01_0277 - 2039129-2040280 27 4.2
02_05_1184 + 34802749-34802892,34802981-34803220,34803636-348039... 27 4.2
11_01_0763 + 6402901-6403971,6404581-6404826 26 5.6
10_06_0175 - 11490280-11491000,11491869-11491947,11493613-114938... 26 5.6
09_04_0430 + 17502387-17503505 26 5.6
03_03_0256 + 15898702-15900420 26 5.6
11_01_0515 + 4003167-4003229,4003318-4003738,4004224-4004367,400... 26 7.4
08_02_0410 - 16842306-16842950,16844994-16845182 26 7.4
06_03_1226 - 28541522-28541755,28543095-28543740,28544017-28545575 26 7.4
01_07_0232 + 42182942-42183490,42183593-42183661,42184320-421844... 26 7.4
11_03_0037 + 9136864-9136993,9137147-9137214,9138891-9139145 25 9.7
11_01_0521 + 4083594-4083763,4083765-4083963,4084059-4084244,408... 25 9.7
08_02_1021 + 23705474-23705764,23706706-23706729 25 9.7
05_07_0004 + 26990250-26990516,26990877-26990931,26991286-269914... 25 9.7
>05_03_0366 -
13102147-13102281,13102560-13102739,13102791-13102992,
13104385-13104575
Length = 235
Score = 32.3 bits (70), Expect = 0.085
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -2
Query: 271 HQPSAAAPFPCVPTQSFVDPIHLKICQYPHGGLGLTNVSMSQM-QGQVDYDFGVGG 107
H P AAA P VP++ P L + GG GL S S + G + D G+GG
Sbjct: 7 HSPRAAAAAPSVPSR-LPRPFLLSLSSPSRGGSGLVAASASAVAAGGSEGDGGIGG 61
>11_06_0411 -
23230580-23230795,23231407-23231862,23232142-23232195,
23232251-23232367
Length = 280
Score = 30.3 bits (65), Expect = 0.34
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1
Query: 169 VRVHRADTGRSSNELDRQTTELERRGMGLQHLAGVLGTL 285
V+ H + R S EL+RQ ELER+G L+ G L +
Sbjct: 89 VQRHGEELERQSRELERQREELERQGRELKMKDGKLNRM 127
>08_02_1291 +
25930056-25930067,25930289-25930334,25930434-25930546,
25930645-25930930,25931357-25931421,25931642-25931693,
25931774-25931883,25932611-25932641,25932853-25933004,
25934622-25934840
Length = 361
Score = 29.5 bits (63), Expect = 0.60
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 184 HGGLGLTNVSMSQMQGQVDYDFGVGGRLPI 95
+GG L ++Q G Y +G GGRLP+
Sbjct: 100 YGGPALPRYGIAQFPGGSGYPYGYGGRLPM 129
>07_03_0809 -
21669632-21669637,21669871-21670131,21670573-21670752,
21671458-21672819
Length = 602
Score = 28.3 bits (60), Expect = 1.4
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +2
Query: 56 SLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMN 211
+L +D L+ YD+ PPDS+ V HA + +R+L + +N
Sbjct: 160 NLWTQVDILILRYDK--PPDSRFVQEALAAHAHATEGSETTAIRLLEVISLN 209
>01_07_0188 -
41866689-41866763,41866889-41867155,41867277-41867722,
41867945-41868033,41868279-41868368,41868661-41868739,
41868979-41869042,41869597-41869684,41869776-41869836,
41869906-41869969,41870134-41870188,41870275-41870346,
41870469-41870551,41870629-41870724,41871279-41871383,
41872159-41872227,41872470-41872561,41872667-41872886
Length = 704
Score = 28.3 bits (60), Expect = 1.4
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = -2
Query: 298 VRPPQAFRGHQPSAAAPFPCVPTQSFVDPIHLKICQYPHGGLGLTNVSMSQMQGQV 131
++PP H + AP P +P+ S P++ + PH S +QM Q+
Sbjct: 551 LQPPAHMLPHAQGSRAPLPQLPSMSGPPPVNPPLPPMPHPMAMQVQGSSNQMMPQM 606
>09_04_0031 + 13946692-13946774,13947007-13948012
Length = 362
Score = 27.5 bits (58), Expect = 2.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 246 NGAAALGWCPRNACGGLTWYC*TR 317
NG AALGW R+ G L+ + TR
Sbjct: 4 NGTAALGWAARDTSGHLSPFSFTR 27
>09_04_0190 -
15443764-15443838,15445360-15445458,15446396-15446891,
15449436-15449479,15449999-15450104,15450243-15450314,
15450474-15450588,15451182-15451407
Length = 410
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +1
Query: 175 VHRADTGRSSNELDRQTTELERRGMG 252
V+ A +SS+ L ++TTE++R G+G
Sbjct: 371 VNEAKETKSSSSLPQKTTEMQRSGIG 396
>09_04_0028 - 13928542-13929538,13929736-13929818
Length = 359
Score = 27.1 bits (57), Expect = 3.2
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 246 NGAAALGWCPRNACGGLTWYC*TR 317
+G AALGW R+A G L+ + TR
Sbjct: 4 DGTAALGWAARDASGHLSPFSFTR 27
>06_01_0277 - 2039129-2040280
Length = 383
Score = 26.6 bits (56), Expect = 4.2
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 317 PRLAVPRQASTSVPRTPAKCCSPIPLR 237
P A PR A+ R +K C P+P R
Sbjct: 148 PHAACPRNATLQQHRLLSKACEPLPRR 174
>02_05_1184 +
34802749-34802892,34802981-34803220,34803636-34803950,
34804030-34804209,34804312-34804504,34805062-34805324,
34805461-34805590,34805719-34805786,34805951-34806199,
34806284-34806357,34808052-34808143,34808603-34808685,
34810337-34810408,34810558-34810683,34810996-34811037
Length = 756
Score = 26.6 bits (56), Expect = 4.2
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -3
Query: 114 SGGDSRSYVARSESIMRDSDVAFSHSAALAIAQVRRNG 1
S GD + + I + SDV SHSA + V NG
Sbjct: 339 SFGDRQEIKLHRQGIYKASDVTLSHSAQIGANSVVGNG 376
>11_01_0763 + 6402901-6403971,6404581-6404826
Length = 438
Score = 26.2 bits (55), Expect = 5.6
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -1
Query: 293 ASTSVPRTPAKCCSPIPLRSNSVVCRSNSFEDLPVSARWTR 171
AST +PR P+ P+P S + + + DLP +AR TR
Sbjct: 365 ASTDIPRRPSHGHIPLPF---SQLDFARTVADLPPTARPTR 402
>10_06_0175 -
11490280-11491000,11491869-11491947,11493613-11493811,
11494003-11494044
Length = 346
Score = 26.2 bits (55), Expect = 5.6
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -2
Query: 295 RPPQAFRGHQPSAAAPFPCVPTQSFV 218
+PPQ G P+ P+P PTQ V
Sbjct: 128 QPPQPSLGWSPNLNLPYPLPPTQPTV 153
>09_04_0430 + 17502387-17503505
Length = 372
Score = 26.2 bits (55), Expect = 5.6
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +1
Query: 58 TVPHDRLAPRNVRSGVSPRLQNRSQPDPAFETC*HS*VRVHRAD 189
+ P R+AP+ + +P ++ + P P F T S +H+ D
Sbjct: 201 STPPQRVAPQPPATAAAPPIEPVAPPSPTFWTVCMSCCHIHQYD 244
>03_03_0256 + 15898702-15900420
Length = 572
Score = 26.2 bits (55), Expect = 5.6
Identities = 11/39 (28%), Positives = 25/39 (64%)
Frame = -3
Query: 156 ACLKCRVRLTTILESGGDSRSYVARSESIMRDSDVAFSH 40
A + C++++ +LES R+Y+ S+++ D++FS+
Sbjct: 301 ASMDCKIKIWDVLESRTCMRTYMGHSKAV---RDISFSN 336
>11_01_0515 + 4003167-4003229,4003318-4003738,4004224-4004367,
4004474-4004556,4004661-4004775,4005309-4005400,
4005558-4005612,4005689-4005834,4005888-4006001,
4006149-4006342,4006985-4007112,4008526-4008583,
4009800-4009876,4010214-4010263,4010336-4010515,
4010633-4010731,4010816-4011133,4011221-4011281,
4011693-4012781,4012951-4013005,4013133-4013291,
4013923-4014442
Length = 1406
Score = 25.8 bits (54), Expect = 7.4
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = -3
Query: 108 GDSRSYVARSESIMRDSDVAFSHSAALAIAQVRR 7
GD +S+VAR+ SI + + +H + R+
Sbjct: 1295 GDQQSFVARASSIKEQGETSLAHCESSTTLDCRK 1328
>08_02_0410 - 16842306-16842950,16844994-16845182
Length = 277
Score = 25.8 bits (54), Expect = 7.4
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 231 VGTQGNGAAALGWCPRNACGGLTW 302
VG G GA +G C R+ GG W
Sbjct: 205 VGVCGGGAGGVGVCARSGEGGGGW 228
>06_03_1226 - 28541522-28541755,28543095-28543740,28544017-28545575
Length = 812
Score = 25.8 bits (54), Expect = 7.4
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +2
Query: 17 CAIASAAECENATSLSLM--IDSLL-ATYDRESPPDSKIVVNLTLHLRHANIRESES 178
CA+ AEC+ +TS SL +D+L A YD + D L +R++ I + +
Sbjct: 50 CAVLRDAECKQSTSHSLQEWLDNLKDAVYDIDDVLDDVSTEALEQEVRNSFIHRTRN 106
>01_07_0232 +
42182942-42183490,42183593-42183661,42184320-42184451,
42184547-42184600,42184714-42184758,42185383-42185522,
42185777-42185902,42185985-42186002,42186631-42187276,
42188121-42188843
Length = 833
Score = 25.8 bits (54), Expect = 7.4
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -1
Query: 317 PRLAVPRQASTSVPRTPAKCCSPIPLR 237
PRL P QAS + P P+PLR
Sbjct: 28 PRLRSPHQASRRLSALPFSRALPLPLR 54
>11_03_0037 + 9136864-9136993,9137147-9137214,9138891-9139145
Length = 150
Score = 25.4 bits (53), Expect = 9.7
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +3
Query: 225 D*VGTQGNGAAALGWCPRNACGG 293
D +G Q +G ++ WC R A G
Sbjct: 7 DDLGRQTSGGRSMAWCSRRAVAG 29
>11_01_0521 +
4083594-4083763,4083765-4083963,4084059-4084244,
4085834-4086025,4086979-4087200,4089238-4089444,
4089681-4090082,4090201-4090230,4090307-4090318
Length = 539
Score = 25.4 bits (53), Expect = 9.7
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 23 IASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLH 145
+ +AE +NA+ L M DS++ ++R + + N+T H
Sbjct: 342 VLESAERQNASRLVKMEDSIIHQHERIIGVEQDMSANITQH 382
>08_02_1021 + 23705474-23705764,23706706-23706729
Length = 104
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 221 KRLSWNAGEWGCSTWLVSSERLWR 292
K+ W AG W V S++LWR
Sbjct: 25 KQQLWPAGARVAGEWWVESKKLWR 48
>05_07_0004 + 26990250-26990516,26990877-26990931,26991286-26991461,
26991702-26991923,26992001-26992239,26992437-26992962,
26993042-26993315,26993391-26994009,26994082-26994121,
26994263-26994310,26994548-26994814,26994892-26995155,
26995260-26995904
Length = 1213
Score = 25.4 bits (53), Expect = 9.7
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 12/108 (11%)
Frame = +2
Query: 26 ASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHL-------RHANIR-ESEST 181
++AA +++ S+ A DR+S DS LTL L H + R S
Sbjct: 925 STAAMASDSSKAKDSASSIFAILDRKSQIDSSSNEGLTLELVKGDIEFTHISFRYPSRPD 984
Query: 182 VRILADLQMNWIDKRLSWNAGEWGC--STWLVSSERLWRPD--VVLLN 313
V+I +D ++ + G+ G ST + ER + PD V+LL+
Sbjct: 985 VQIFSDFTLSIPSGKTVALVGQSGSGKSTAIALLERFYDPDSGVILLD 1032
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,924,182
Number of Sequences: 37544
Number of extensions: 216372
Number of successful extensions: 783
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 783
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 398975940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -