Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0138
(317 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24) 43 6e-05
SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24) 42 8e-05
SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 41 2e-04
SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41) 40 6e-04
SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24) 40 6e-04
SB_37177| Best HMM Match : Neur_chan_LBD (HMM E-Value=5.3) 38 0.002
SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.002
SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002) 38 0.002
SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08) 36 0.009
SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 35 0.012
SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.022
SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 34 0.029
SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.066
SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05) 32 0.12
SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 31 0.15
SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.20
SB_4972| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.92) 31 0.20
SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 30 0.35
SB_14827| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8) 30 0.35
SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.35
SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 29 0.62
SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.62
SB_5179| Best HMM Match : Neur_chan_memb (HMM E-Value=3.5e-08) 29 0.82
SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.82
SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.4
SB_24860| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.4
SB_14966| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.00043) 28 1.4
SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 28 1.4
SB_37132| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8e-06) 28 1.4
SB_35938| Best HMM Match : BTB (HMM E-Value=8.5e-24) 27 2.5
SB_18870| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.3
SB_33848| Best HMM Match : RasGEF_N (HMM E-Value=2.3e-13) 27 3.3
SB_41259| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.8
SB_33752| Best HMM Match : I-set (HMM E-Value=3.7e-15) 26 5.8
SB_38580| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.8
SB_30129| Best HMM Match : Y_phosphatase (HMM E-Value=6.7e-13) 26 5.8
SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35) 26 7.6
SB_24593| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.6
>SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24)
Length = 373
Score = 42.7 bits (96), Expect = 6e-05
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Frame = +2
Query: 80 LLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 244
L TY+++ P D + V L L L ++ + T+ ++ ++ W D RL WN
Sbjct: 20 LFRTYNKDVLPKETLDKGVPVRLDLALNQIIDVNKRAQTMTVVIWVRQYWRDPRLRWNVS 79
Query: 245 EW-GCSTWLVSSERLWRPDVVLLN 313
+ G ++ + RLW PD+ L N
Sbjct: 80 AYDGVDNIVIKASRLWLPDITLYN 103
>SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24)
Length = 478
Score = 42.3 bits (95), Expect = 8e-05
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +2
Query: 206 MNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLN 313
+ W++ LSWNA E+G +T V +RLW PD+VL N
Sbjct: 77 VKWVNPSLSWNASEFGGVNTLHVEPDRLWVPDIVLYN 113
>SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 541
Score = 41.1 bits (92), Expect = 2e-04
Identities = 21/88 (23%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Frame = +2
Query: 68 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 232
+++ L Y +++ P D + + L + LR ++ E E + ++ W D L
Sbjct: 453 LLNYLFQNYSKDARPVLNVDDPVQLKLGIMLRQVIDLDEREQILTTNVWIRQYWADHFLQ 512
Query: 233 WNAGEW-GCSTWLVSSERLWRPDVVLLN 313
WN ++ G + +++ +++W+PDV+L N
Sbjct: 513 WNPDDFSGIKSIIIAPDKVWKPDVLLFN 540
Score = 39.9 bits (89), Expect = 4e-04
Identities = 22/88 (25%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Frame = +2
Query: 68 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 232
++ LL Y +++ P + + + L + LR ++ E + + I ++ W D L
Sbjct: 35 LLKYLLQNYSKDARPVLNVNDPVQLKLGIMLRQVIDLNERDQILTINVWIRQYWKDHLLK 94
Query: 233 WNAGEWG-CSTWLVSSERLWRPDVVLLN 313
WN ++G + ++ +R+W+PDV+L N
Sbjct: 95 WNPDDFGGIKSINIAPDRVWKPDVLLYN 122
>SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41)
Length = 342
Score = 39.5 bits (88), Expect = 6e-04
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +2
Query: 134 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLL 310
LTL+ H ++E ++ L+ W D RL+WN E+ G + S+ +W PD+ +L
Sbjct: 22 LTLYDFHTQDEKNE-VIQTFLILEQMWNDTRLAWNETEYGGIKQMTLRSKLIWTPDISVL 80
Query: 311 NA 316
N+
Sbjct: 81 NS 82
>SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24)
Length = 445
Score = 39.5 bits (88), Expect = 6e-04
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +2
Query: 185 RILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNA 316
+++ + + W + LSWNA E+ G S VS +R W PD++L N+
Sbjct: 16 KLIRIIAVRWTNPDLSWNASEYGGVSQIYVSPKRPWTPDILLYNS 60
>SB_37177| Best HMM Match : Neur_chan_LBD (HMM E-Value=5.3)
Length = 79
Score = 37.9 bits (84), Expect = 0.002
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +2
Query: 179 TVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSER--LWRPDVVLLN 313
T+R+ ++ W D +L W+ ++G +V ER +W PDVVLLN
Sbjct: 32 TIRLQQIYELAWWDHKLQWDQSKYGGIKEVVLPERGVIWVPDVVLLN 78
>SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 724
Score = 37.9 bits (84), Expect = 0.002
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +2
Query: 179 TVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSER--LWRPDVVLLN 313
T+R+ ++ W D +L W+ ++G +V ER +W PDVVLLN
Sbjct: 32 TIRLQQIYELAWWDHKLQWDQSKYGGIKEVVLPERGVIWVPDVVLLN 78
>SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002)
Length = 123
Score = 37.5 bits (83), Expect = 0.002
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Frame = +2
Query: 44 ENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQM 208
++ L L+ D Y++ P D + V + + + + + ++L ++M
Sbjct: 27 QDDNELRLIKDLFFRGYNKNVRPVEDKSMPVEVKFGIAYTQVVDLIEKDQVLISNIWVRM 86
Query: 209 NWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 313
NW + L WNA E+G L +S +W PD+VL N
Sbjct: 87 NWNNHLLRWNASEYGGIDKLNISPTLMWLPDIVLHN 122
>SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08)
Length = 362
Score = 35.5 bits (78), Expect = 0.009
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 200 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLN 313
+ + W D RL WN ++G +++ S +LW PD+ L N
Sbjct: 276 IDLYWTDFRLRWNHTKYGGIKSFVTPSRQLWLPDITLYN 314
>SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 716
Score = 35.1 bits (77), Expect = 0.012
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 212 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 313
W + LSWNA E+ G S + ++LW+PD+ L N
Sbjct: 119 WKNPLLSWNASEYGGISQVNLEPDQLWKPDIYLYN 153
>SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 686
Score = 34.3 bits (75), Expect = 0.022
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +2
Query: 152 HANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 313
H + + TV L W D L+WN ++ G + V +W PD+VL N
Sbjct: 199 HQQLMGAPVTVACFLPLLQKWYDPWLTWNESDFGGMKSIKVDPSCVWVPDIVLYN 253
>SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 548
Score = 33.9 bits (74), Expect = 0.029
Identities = 14/58 (24%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +2
Query: 143 HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 313
HLR + V + ++ W + L+WN ++ G + ++ ++W PD++L N
Sbjct: 106 HLRFDISEQQAQLVTVSVWIRQKWTNPMLAWNTSKYGGIESVNLNPAKVWIPDIILYN 163
>SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 930
Score = 32.7 bits (71), Expect = 0.066
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 200 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 313
L+M W D L WN ++G T + + + +W P V++ N
Sbjct: 547 LRMGWKDAFLQWNPADYGGVTQINLEASDIWTPPVIIYN 585
>SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05)
Length = 191
Score = 31.9 bits (69), Expect = 0.12
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +2
Query: 119 KIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRP 295
K +V LH + A + S S VR+ +++ W + L WN ++G T V+ +W P
Sbjct: 69 KRIVRPVLHPQDA-VNVSFS-VRLNKLVEVKWENPFLVWNESDYGGVHTLHVTFNDVWVP 126
Query: 296 DVVLLN 313
D+VL N
Sbjct: 127 DIVLYN 132
>SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 422
Score = 31.5 bits (68), Expect = 0.15
Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 200 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLN 313
+++ W D L+WN ++G + V +W+PD++L N
Sbjct: 26 IRLYWKDHLLNWNPEDFGGVKSINVEPNNVWKPDILLYN 64
>SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 31.1 bits (67), Expect = 0.20
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 200 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 313
+ + W + L+W+ +G T + V R+WRPD++L N
Sbjct: 75 IDLKWNNPLLTWDPTHFGNLTSINVDPLRVWRPDLILYN 113
>SB_4972| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.92)
Length = 88
Score = 31.1 bits (67), Expect = 0.20
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +2
Query: 68 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNA 241
+++ LL YDR P + V +TL L T+ + D+ W + L+WN
Sbjct: 15 LLEKLLTGYDRNERPVLNDNESVTVTLGL----------TLNQIVDVI--WYNPLLTWNV 62
Query: 242 GEWG-CSTWLVSSERLWRPDVVL 307
E+G T VS +W PD+VL
Sbjct: 63 TEYGGLKTINVSPTIIWLPDIVL 85
>SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 434
Score = 30.3 bits (65), Expect = 0.35
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 203 QMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 313
+ W D L W+ + G T + V LW+PD+VL N
Sbjct: 88 RQTWTDAWLKWDPAKHGGITAINVDPSFLWKPDMVLYN 125
>SB_14827| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8)
Length = 156
Score = 30.3 bits (65), Expect = 0.35
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +2
Query: 212 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLN 313
W ++ L+W+ E+G ST V+ +++W PD+ L N
Sbjct: 2 WRNEYLTWDPKEFGGISTINVNVDKVWVPDIYLYN 36
>SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 30.3 bits (65), Expect = 0.35
Identities = 11/37 (29%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 200 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVL 307
+ + W++ L+W+ +G T + V+ +W+PD+VL
Sbjct: 64 INLRWVNPFLTWDPKMYGGLTSINVNPNMIWKPDIVL 100
>SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 275
Score = 29.5 bits (63), Expect = 0.62
Identities = 11/39 (28%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 200 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 313
+ + W + ++WN E+G + + LW+PD+ L N
Sbjct: 44 MDVKWENPLVAWNKSEYGGIVQVNLDPSTLWKPDIYLYN 82
>SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 648
Score = 29.5 bits (63), Expect = 0.62
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 212 WIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 313
W D L W+ ++ S + +W PDV L+N
Sbjct: 404 WKDPSLQWDKAKYNLHKTRFSPKEIWVPDVSLIN 437
>SB_5179| Best HMM Match : Neur_chan_memb (HMM E-Value=3.5e-08)
Length = 428
Score = 29.1 bits (62), Expect = 0.82
Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = +2
Query: 200 LQMNWIDKRLSWNAG-EWGCSTWLVSSERLWRPDVVLLN 313
+ W D L WN G V +W PD+ L+N
Sbjct: 28 IYQEWKDPNLKWNKSIAQGVEEIFVDPSDIWTPDIALMN 66
>SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1516
Score = 29.1 bits (62), Expect = 0.82
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -2
Query: 169 LTNVSMSQMQGQVDYDFGVGGRLPIVRCEERVDHE 65
L+++S +G VD FGV + +R +++D+E
Sbjct: 594 LSHISGGDKEGDVDLHFGVNSQTGAIRLNKKLDYE 628
>SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1758
Score = 28.3 bits (60), Expect = 1.4
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +2
Query: 191 LADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 313
+ DLQ W + L+W+ ++G + V+ E +W PD+V+ N
Sbjct: 1467 IVDLQ--WENPILTWDPRDYGGVQEINVAPEEVWVPDIVIYN 1506
>SB_24860| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 28.3 bits (60), Expect = 1.4
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Frame = +2
Query: 92 YDRESPP--DSKIVVNLTLHLRHAN---IRESESTVRILADLQMNWIDKRLSWNAGEWGC 256
YD+ P D+ V L + + N I E V + ++ NW D RL+ N +
Sbjct: 14 YDKTERPGVDTGKPVELGVDIHFDNFGRIEEMNMEVDVFLYMRYNWKDPRLA-NFTDKTI 72
Query: 257 STWLVSSERLWRPDVVLLNA 316
+ E++WRPD NA
Sbjct: 73 TFTRGDIEKVWRPDTYCSNA 92
>SB_14966| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.00043)
Length = 137
Score = 28.3 bits (60), Expect = 1.4
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Frame = +2
Query: 92 YDRESPP--DSKIVVNLTLHLRHAN---IRESESTVRILADLQMNWIDKRLSWNAGEWGC 256
YD+ P D+ V L + + N I E V + ++ NW D RL+ N +
Sbjct: 14 YDKTERPGVDTGKPVELGVDIHFDNFGRIEEMNMEVDVFLYMRYNWKDPRLA-NFTDKTI 72
Query: 257 STWLVSSERLWRPDVVLLNA 316
+ E++WRPD NA
Sbjct: 73 TFTRGDIEKVWRPDTYCSNA 92
>SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 506
Score = 28.3 bits (60), Expect = 1.4
Identities = 11/46 (23%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +2
Query: 182 VRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNA 316
+ I+ + + W ++ L+W+ + G T + ++ +W PD+VL ++
Sbjct: 39 MEIVQIVNVRWDNELLTWHPSNYEGVQTVRLDAKSVWIPDIVLYDS 84
>SB_37132| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8e-06)
Length = 229
Score = 28.3 bits (60), Expect = 1.4
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Frame = +2
Query: 47 NATSLSLMIDSLLATYDRESPPD-SKIVVNLTLHLRHANIRE-SESTVRILAD--LQMNW 214
NA +LS+ I+ LA+YDR+ P+ + V + + + + E E+ + D L+ W
Sbjct: 15 NAHNLSVFINDALASYDRKVRPNYGGLPVMVLIEFKVISFGEIQEANMEYSFDIFLRQWW 74
Query: 215 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 313
D R N E + ++ W PD N
Sbjct: 75 YDPRFKSNFTE-PFTMAADPTKMFWTPDTYFWN 106
>SB_35938| Best HMM Match : BTB (HMM E-Value=8.5e-24)
Length = 467
Score = 27.5 bits (58), Expect = 2.5
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = -2
Query: 220 VDPIHLKICQYPHGGLGLTNVSMSQMQGQVDYDFGVGGRLPIV 92
+D I LK+ + GL+ + +QG V YDFG+ LP+V
Sbjct: 368 LDEIALKLPEPVRVTPGLSYCVKAHIQGPVKYDFGITA-LPVV 409
>SB_18870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1352
Score = 27.1 bits (57), Expect = 3.3
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -1
Query: 266 AKCCSPIPLRSNSVVCRSNSFEDL 195
++C +P+R VCR N F DL
Sbjct: 1223 SECLEELPIREAVKVCRHNCFNDL 1246
>SB_33848| Best HMM Match : RasGEF_N (HMM E-Value=2.3e-13)
Length = 899
Score = 27.1 bits (57), Expect = 3.3
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -3
Query: 252 PHSPAFQLSRLSIQF--I*RSASIRTVDSDSRMLAC 151
PHS A QLS L++ F R ++R+VD L C
Sbjct: 113 PHSRAMQLSGLAVAFSRYDRKRNLRSVDEGDGELLC 148
>SB_41259| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 961
Score = 26.2 bits (55), Expect = 5.8
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -2
Query: 247 FPCVPTQSFVDPIHLKICQYPHGGLGLTNVSMSQMQGQVDY 125
FPC Q F P ++C H G ++ + +VDY
Sbjct: 437 FPCSKIQRFFRPRRSELCVLLHAGYPRNSLKVDYYGLKVDY 477
>SB_33752| Best HMM Match : I-set (HMM E-Value=3.7e-15)
Length = 783
Score = 26.2 bits (55), Expect = 5.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 139 GQVDYDFGVGGRLPIVRCEERVDHEGQ*CCV 47
G+V + G GG+ +V E D +G+ CCV
Sbjct: 373 GRVRFTSGEGGKHALVIEEVEDDDQGEYCCV 403
>SB_38580| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 990
Score = 26.2 bits (55), Expect = 5.8
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 95 DRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKR 226
D E+ PD N +H IRE ++T + D N I+K+
Sbjct: 16 DGETSPDQGKSDNNAKKRKHETIREVDNTDHVKTDKDNNKIEKK 59
>SB_30129| Best HMM Match : Y_phosphatase (HMM E-Value=6.7e-13)
Length = 139
Score = 26.2 bits (55), Expect = 5.8
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = -2
Query: 172 GLTNVSMSQMQGQVDYDFGVGGRLP-IVRCEERVDHEGQ*CCV 47
GL+ + + GQV Y GR P IV C V G C V
Sbjct: 64 GLSRCQLIDLIGQVQYWQAESGRHPIIVHCSAGVGRTGVFCAV 106
>SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35)
Length = 479
Score = 25.8 bits (54), Expect = 7.6
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +2
Query: 212 WIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 313
W + L WN +G + VS ++W PD+VL N
Sbjct: 40 WYNPFLRWNETFYGGIKEINVSPLQVWTPDLVLYN 74
>SB_24593| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1453
Score = 25.8 bits (54), Expect = 7.6
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 239 AGEWGCSTWLVSSERLWRP 295
AGE S WL E LWRP
Sbjct: 987 AGELQDSRWLTGPEFLWRP 1005
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,701,321
Number of Sequences: 59808
Number of extensions: 214442
Number of successful extensions: 731
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 718
length of database: 16,821,457
effective HSP length: 72
effective length of database: 12,515,281
effective search space used: 413004273
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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