Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0138
         (317 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    44   1e-06
AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic acetylch...    44   1e-06
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    43   2e-06
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    43   3e-06
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    43   3e-06
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    42   6e-06
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    42   7e-06
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    40   2e-05
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    39   5e-05
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    38   1e-04
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    38   1e-04
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    37   2e-04
DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.       23   3.6  
CR954257-3|CAJ14154.1|  277|Anopheles gambiae predicted protein ...    22   4.8  
AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsiv...    22   6.4  
DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.           21   8.4  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    21   8.4  
AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.        21   8.4  

>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 44.4 bits (100), Expect = 1e-06
 Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
 Frame = +2

Query: 68  MIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKR 226
           + D LL+ Y+R   P S     ++V L L L      N+++   T  I   L+  W D +
Sbjct: 39  LYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTNIW--LEHEWQDHK 96

Query: 227 LSWNAGEWGCSTWL-VSSERLWRPDVVLLN 313
             W+  E+G  T L V SE +W PD+VL N
Sbjct: 97  FKWDPAEYGGVTELYVPSEHIWLPDIVLYN 126


>AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 9 protein.
          Length = 406

 Score = 44.0 bits (99), Expect = 1e-06
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
 Frame = +2

Query: 80  LLATYD---RESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW 250
           LL  YD   R S   +   V   + + H  I E +ST+ +   ++ +W D +L+WN   +
Sbjct: 46  LLKGYDPSIRPSQHYNVTTVETGITITHVEINEIKSTLSVYGWMKFSWNDPKLTWNPASY 105

Query: 251 G-CSTWLVSSERLWRPDVVLLN 313
           G  +        +WRPDVVL N
Sbjct: 106 GNLNVVRWDPTIVWRPDVVLYN 127


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 43.2 bits (97), Expect = 2e-06
 Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
 Frame = +2

Query: 68  MIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRESESTVRILADLQMNWIDKR 226
           + D LL+ Y+R   P      ++ V + L L      N++    T  +   ++  W D +
Sbjct: 27  LYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYK 84

Query: 227 LSWNAGEWG-CSTWLVSSERLWRPDVVLLN 313
           L WN  ++G   T  V SE +W PD+VL N
Sbjct: 85  LKWNPDDYGGVDTLHVPSEHIWLPDIVLYN 114


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 42.7 bits (96), Expect = 3e-06
 Identities = 29/109 (26%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
 Frame = +2

Query: 5   FLLTCAIASAAECENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESES 178
           +LL+  +   A   N  +  L  D LL+ Y++   P  ++  V+ + + L+ + + +   
Sbjct: 11  WLLSALVVHGAVAGNPDAKRLY-DDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNL 69

Query: 179 TVRILAD---LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 313
             +I+     ++ +W D +L W   E+G    L V S+ +WRPD+VL N
Sbjct: 70  KNQIMTTNLWVEQSWYDYKLRWEPKEYGGVQMLHVPSDHIWRPDIVLYN 118


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 42.7 bits (96), Expect = 3e-06
 Identities = 29/109 (26%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
 Frame = +2

Query: 5   FLLTCAIASAAECENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESES 178
           +LL+  +   A   N  +  L  D LL+ Y++   P  ++  V+ + + L+ + + +   
Sbjct: 11  WLLSALVVHGAVAGNPDAKRLY-DDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNL 69

Query: 179 TVRILAD---LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 313
             +I+     ++ +W D +L W   E+G    L V S+ +WRPD+VL N
Sbjct: 70  KNQIMTTNLWVEQSWYDYKLRWEPKEYGGVQMLHVPSDHIWRPDIVLYN 118


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 41.9 bits (94), Expect = 6e-06
 Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 8/104 (7%)
 Frame = +2

Query: 26  ASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTV 184
           A  + C        + D LL+ Y++   P   +   LT+ ++         N++    T 
Sbjct: 13  AVVSVCGGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTT 72

Query: 185 RILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 313
            +   ++  W D +L W   E+G    L V S+ +WRPD+VL N
Sbjct: 73  NLW--VEQTWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIVLYN 114


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 41.5 bits (93), Expect = 7e-06
 Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
 Frame = +2

Query: 68  MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 232
           ++++LLATY+    P       + V   L L+   ++ E    +   A L + W D  L 
Sbjct: 27  LLNNLLATYNTLERPVANESDPLEVKFGLTLQQIIDVDEKNQILTTNAWLNLEWNDYNLR 86

Query: 233 WNAGEWGCSTWL-VSSERLWRPDVVLLNA 316
           WN  E+G    L ++  +LW+PDV++ N+
Sbjct: 87  WNDSEYGGVRDLRITPNKLWKPDVLMYNS 115


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 40.3 bits (90), Expect = 2e-05
 Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
 Frame = +2

Query: 68  MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 232
           + D LL+ Y+R   P       LT  L L+ + + E     +++     ++  W D +L 
Sbjct: 33  LYDDLLSNYNRLIRPVVNNTETLTVWLGLKLSQLIEVSLRNQVMTTNLWVKQKWFDYKLR 92

Query: 233 WNAGEWGCSTWL-VSSERLWRPDVVLLN 313
           W+  E+G    L V SE++W PD+VL N
Sbjct: 93  WDPEEYGGVEMLYVPSEQIWLPDIVLYN 120


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 38.7 bits (86), Expect = 5e-05
 Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
 Frame = +2

Query: 68  MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 232
           ++++LLATY+    P       + V   L L+   ++ E    +     L + W D  L 
Sbjct: 27  LLNNLLATYNTLERPVANESDPLEVKFGLTLQQIIDVDEKNQLLITNIWLSLEWNDYNLR 86

Query: 233 WNAGEWGCSTWL-VSSERLWRPDVVLLNA 316
           WN  E+G    L ++  +LW+PDV++ N+
Sbjct: 87  WNDSEYGGVRDLRITPNKLWKPDVLMYNS 115


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 37.5 bits (83), Expect = 1e-04
 Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +2

Query: 200 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNA 316
           L++ W D  + WN+ E+G    L +   RLW+PDV++ N+
Sbjct: 59  LKLEWNDMNVRWNSSEYGGVRDLRIPPHRLWKPDVLMYNS 98


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 37.5 bits (83), Expect = 1e-04
 Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = +2

Query: 200 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNA 316
           L++ W D  L WN  E+G    L +   R+W+PDV++ N+
Sbjct: 91  LKLEWNDMNLRWNTSEYGGVRDLRIPPHRIWKPDVLMYNS 130


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 36.7 bits (81), Expect = 2e-04
 Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = +2

Query: 158 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 313
           N+ E    ++    L++ W D +L W+  ++ G     +  +++W+PD+VL N
Sbjct: 65  NVNEKNQIMKSNVWLRLVWSDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFN 117


>DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.
          Length = 595

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +1

Query: 94  RSGVSPRLQNRSQPD 138
           RS +SP L   SQPD
Sbjct: 370 RSNLSPMLNEESQPD 384


>CR954257-3|CAJ14154.1|  277|Anopheles gambiae predicted protein
           protein.
          Length = 277

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -1

Query: 227 VVCRSNSFEDLPVSARWTRTH 165
           ++ R   F ++P +A W R H
Sbjct: 220 MLARERLFRNVPAAAGWQRQH 240


>AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsive
           protein 1 protein.
          Length = 447

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = -3

Query: 126 TILESGGDSRSYVARSESIMR 64
           T+LESGG   ++V  + S+++
Sbjct: 131 TLLESGGSRTAFVNSAYSLLK 151


>DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 247 MGLQHLAGVLGTLVEA 294
           +G QH+ GVLG  + A
Sbjct: 381 LGRQHMLGVLGNEIAA 396


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +1

Query: 178 HRADTGRSSNELDRQTTELERRGMGLQHLAGVLG 279
           +R++  R++ + DR+ +     G+G    AGV G
Sbjct: 586 NRSNHHRTTEQADREASVCAAGGVGAAAAAGVGG 619


>AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 275 RTPAKCCSPIPLRSNSVV 222
           R P  CC+P  L   SV+
Sbjct: 400 RVPKPCCAPTKLNPISVL 417


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 355,194
Number of Sequences: 2352
Number of extensions: 6828
Number of successful extensions: 38
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 21181083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)