Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0138
(317 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 49 1e-08
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 46 1e-07
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 45 2e-07
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 43 8e-07
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 43 1e-06
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 42 1e-06
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 41 3e-06
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 41 3e-06
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 41 4e-06
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 41 4e-06
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 40 5e-06
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 40 5e-06
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 40 5e-06
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 40 5e-06
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 40 5e-06
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 40 5e-06
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 38 2e-05
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 38 4e-05
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 37 5e-05
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 35 3e-04
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 33 8e-04
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 32 0.001
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 31 0.003
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 30 0.006
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 30 0.008
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 24 0.51
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 2.1
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 2.7
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 2.7
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 2.7
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 2.7
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 2.7
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 2.7
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 2.7
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 2.7
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 21 3.6
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 21 3.6
DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. 21 4.7
S78459-1|AAB34403.1| 50|Apis mellifera mast cell-degranulating... 20 6.3
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 20 8.3
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 49.2 bits (112), Expect = 1e-08
Identities = 35/105 (33%), Positives = 49/105 (46%), Gaps = 8/105 (7%)
Frame = +2
Query: 23 IASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESEST 181
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 182 VRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 313
+ L+ W D + W+ E+G T L V SE +W PD+VL N
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYN 111
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 45.6 bits (103), Expect = 1e-07
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 8/109 (7%)
Frame = +2
Query: 11 LTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRE 169
++C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 170 SESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLN 313
T + ++ W D +L WN ++G T V SE +W PD+VL N
Sbjct: 65 QIMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYN 111
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 45.2 bits (102), Expect = 2e-07
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Frame = +2
Query: 41 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 205
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 206 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL 307
+ W L+W + E+ ++ V S +W PD+V+
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM 122
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 43.2 bits (97), Expect = 8e-07
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Frame = +2
Query: 41 CENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRILAD 199
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 200 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 313
++ +W D +L W+ E+G L V S+ +WRPD+VL N
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYN 115
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 42.7 bits (96), Expect = 1e-06
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Frame = +2
Query: 47 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 214
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 215 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 313
+D+RL++ G+ + + R+W+PD N
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYN 94
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 42.3 bits (95), Expect = 1e-06
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Frame = +2
Query: 68 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 232
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 233 WNAGEWGCSTWL-VSSERLWRPDVVLLN 313
WN E+G L V SE +W PD+VL N
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYN 124
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 41.1 bits (92), Expect = 3e-06
Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Frame = +2
Query: 68 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 232
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 233 WNAGEWGCSTWL-VSSERLWRPDVVLLN 313
W E+G L V S+ +WRPD+VL N
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYN 119
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 41.1 bits (92), Expect = 3e-06
Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Frame = +2
Query: 68 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 232
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 233 WNAGEWGCSTWL-VSSERLWRPDVVLLN 313
W E+G L V S+ +WRPD+VL N
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYN 119
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 40.7 bits (91), Expect = 4e-06
Identities = 21/89 (23%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Frame = +2
Query: 68 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 232
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 233 WNAGEW-GCSTWLVSSERLWRPDVVLLNA 316
WN E+ G ++ +LW+PD+++ N+
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNS 146
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 40.7 bits (91), Expect = 4e-06
Identities = 21/89 (23%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Frame = +2
Query: 68 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 232
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 233 WNAGEW-GCSTWLVSSERLWRPDVVLLNA 316
WN E+ G ++ +LW+PD+++ N+
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNS 146
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 40.3 bits (90), Expect = 5e-06
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 158 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNA 316
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNS 78
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 40.3 bits (90), Expect = 5e-06
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 158 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNA 316
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNS 78
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 40.3 bits (90), Expect = 5e-06
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 158 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNA 316
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNS 78
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 40.3 bits (90), Expect = 5e-06
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 158 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNA 316
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNS 78
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 40.3 bits (90), Expect = 5e-06
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 158 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNA 316
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNS 78
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 40.3 bits (90), Expect = 5e-06
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 158 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNA 316
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNS 78
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 38.3 bits (85), Expect = 2e-05
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +2
Query: 122 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 298
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 299 VVLLN 313
+L N
Sbjct: 92 TILYN 96
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 37.5 bits (83), Expect = 4e-05
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +2
Query: 119 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWR 292
K+ VN L ++ N+ E ++ L+ W D +L W+ ++ G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 293 PDVVLLN 313
PD+VL N
Sbjct: 111 PDIVLFN 117
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 37.1 bits (82), Expect = 5e-05
Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Frame = +2
Query: 20 AIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHA-NIRESESTV 184
A+A++ + +++ LL TY+ E P ++ +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 185 RILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNA 316
L++ W D + WN ++G L + RLW+PDV++ N+
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNS 115
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 34.7 bits (76), Expect = 3e-04
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Frame = +2
Query: 44 ENATSLSLMIDSLLATYDRESPPDS--KIVVNLTLHL--RHANIRESESTVRILADLQMN 211
++ T+L + L YD P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 212 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNA 316
W D LSW ++ G + V S+ +W PD+ + N+
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNS 134
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 33.1 bits (72), Expect = 8e-04
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 9/91 (9%)
Frame = +2
Query: 68 MIDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKR 226
++D++L YD E+ D +V + L +R A I + + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 227 LSWN--AGEWGCSTWLVSSERLWRPDVVLLN 313
L +N G T L + R+W PD+ N
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSN 124
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 32.3 bits (70), Expect = 0.001
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Frame = +2
Query: 56 SLSLMIDSLLATYDRESPPD----SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWID 220
++++++++LL Y+ P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 221 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 313
RLS+ S + ER+WRPD N
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYN 126
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 31.1 bits (67), Expect = 0.003
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Frame = +2
Query: 47 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 214
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 215 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLN 313
D RL++ G T V SE +W PD +N
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVN 102
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 30.3 bits (65), Expect = 0.006
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 9/91 (9%)
Frame = +2
Query: 68 MIDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKR 226
++D++L YD E+ D VV + + +R + I + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 227 LSWN--AGEWGCSTWLVSSERLWRPDVVLLN 313
L +N G T L + R+W PD+ N
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSN 124
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 29.9 bits (64), Expect = 0.008
Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Frame = +2
Query: 47 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 214
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 215 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLN 313
D RL++ G T V SE +W PD +N
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVN 102
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 23.8 bits (49), Expect = 0.51
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -3
Query: 168 SRMLACLKCRVRLTTILESGGDSRSYVARSESIMRDSDV 52
+RMLA L RL+ + SGG RSES++ D+
Sbjct: 21 ARMLALLVSLHRLS--IYSGGSDWRVAGRSESVVIPGDI 57
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 2.1
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 265 PSAAAPFPCVPTQS 224
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 2.7
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 263 KCCSPIPLRSNSVVCRSNSFE 201
K C + SNS+ RS SF+
Sbjct: 205 KTCKKYAISSNSLRSRSRSFQ 225
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 2.7
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 263 KCCSPIPLRSNSVVCRSNSFE 201
K C + SNS+ RS SF+
Sbjct: 205 KTCKKYAISSNSLRSRSRSFQ 225
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 2.7
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 263 KCCSPIPLRSNSVVCRSNSFE 201
K C + SNS+ RS SF+
Sbjct: 205 KTCKKYAISSNSLRSRSRSFQ 225
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 2.7
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 263 KCCSPIPLRSNSVVCRSNSFE 201
K C + SNS+ RS SF+
Sbjct: 205 KTCKKYAISSNSLGSRSRSFQ 225
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 2.7
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 263 KCCSPIPLRSNSVVCRSNSFE 201
K C + SNS+ RS SF+
Sbjct: 205 KTCKKYAISSNSLRSRSRSFQ 225
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 2.7
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 263 KCCSPIPLRSNSVVCRSNSFE 201
K C + SNS+ RS SF+
Sbjct: 205 KTCKKYAISSNSLRSRSRSFQ 225
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.4 bits (43), Expect = 2.7
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 263 KCCSPIPLRSNSVVCRSNSFE 201
K C + SNS+ RS SF+
Sbjct: 205 KTCKKYAISSNSLRSRSRSFQ 225
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.4 bits (43), Expect = 2.7
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 263 KCCSPIPLRSNSVVCRSNSFE 201
K C + SNS+ RS SF+
Sbjct: 205 KTCKKYAISSNSLRSRSRSFQ 225
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 21.0 bits (42), Expect = 3.6
Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Frame = +2
Query: 122 IVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 283
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 284 LWRPDVVLLNA 316
LW+PD LNA
Sbjct: 71 LWQPDPYFLNA 81
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 21.0 bits (42), Expect = 3.6
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1
Query: 85 RNVRSGVSPRLQNRS 129
R R +SPR++NRS
Sbjct: 729 RQHRDSLSPRVENRS 743
>DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein.
Length = 120
Score = 20.6 bits (41), Expect = 4.7
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -1
Query: 272 TPAKCCSPIPLRSNSVVCRSNSFED 198
TP + + PL + V CR+N E+
Sbjct: 26 TPRRKKNKKPLPTECVFCRNNGEEE 50
>S78459-1|AAB34403.1| 50|Apis mellifera mast cell-degranulating
peptide protein.
Length = 50
Score = 20.2 bits (40), Expect = 6.3
Identities = 5/12 (41%), Positives = 8/12 (66%)
Frame = +1
Query: 4 VSPHLCYS*CGR 39
+ PH+C CG+
Sbjct: 37 IKPHICRKICGK 48
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 19.8 bits (39), Expect = 8.3
Identities = 7/38 (18%), Positives = 18/38 (47%)
Frame = -1
Query: 203 EDLPVSARWTRTHEC*HVSNAGSG*LRFWSRGETPDRT 90
+++ + RW E + +G +++ + P+RT
Sbjct: 387 DEIGMEDRWFTYQETVDPAGCNAGPAKYYLKSRDPERT 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,549
Number of Sequences: 438
Number of extensions: 1854
Number of successful extensions: 60
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 6844365
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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