Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0137
         (302 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    20   5.0  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    19   8.7  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        19   8.7  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    19   8.7  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 20.2 bits (40), Expect = 5.0
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = -1

Query: 224 FFEFVSPVKTILEPLFQCFNHTFAYFVFVSR*QTRELYLLGN 99
           F   V+ +   L  L Q  N+   Y+V ++   T  L ++GN
Sbjct: 111 FVNNVAALDETLAKLGQYINYETDYYVCLAMTITGPLVIIGN 152


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 231 FTRVWKGIFYAMWMSDK 281
           FT   K ++Y+ ++SDK
Sbjct: 172 FTFHKKNLYYSFYISDK 188


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 285 VAYPTSTSHKIYPST 241
           +A+    SH IYPS+
Sbjct: 342 IAHNPYPSHSIYPSS 356


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -2

Query: 151 TLFSFPDNKRANFISWATTATCSFLV 74
           T ++F +      I W T+ TC  +V
Sbjct: 328 TFWAFSNACEVMAIVWITSETCEEIV 353


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,393
Number of Sequences: 336
Number of extensions: 1187
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5412171
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)