Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0136
(716 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces... 40 5e-04
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 36 0.006
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 36 0.008
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 35 0.010
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 34 0.018
SPAC19A8.07c |||U3 snoRNP-associated protein Imp4 |Schizosacchar... 33 0.041
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 33 0.041
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 33 0.054
SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces pomb... 32 0.094
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 31 0.12
SPCC737.06c |||glutamate-cysteine ligase regulatory subunit |Sch... 30 0.38
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 29 0.50
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 29 0.50
SPAC17C9.11c |||zinc finger protein, zf-C2H2 type/UBA domain pro... 29 0.50
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 29 0.66
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 0.88
SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein Ndc80|... 29 0.88
SPAC18B11.02c |||pseudouridylate synthase |Schizosaccharomyces p... 29 0.88
SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 29 0.88
SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces p... 28 1.2
SPAC17G6.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 28 1.2
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 28 1.5
SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|c... 28 1.5
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 28 1.5
SPAC8C9.07 |||rRNA processing protein Fyv7 |Schizosaccharomyces ... 28 1.5
SPAC4F10.17 |||conserved fungal protein|Schizosaccharomyces pomb... 27 2.0
SPCC24B10.11c |||THO complex subunit 7 |Schizosaccharomyces pomb... 27 3.5
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 27 3.5
SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering compo... 26 4.7
SPCC569.08c |ade5|ade8|phosphoribosylglycinamide formyltransfera... 26 6.2
SPAC4H3.06 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 25 8.2
SPBC16G5.05c |||MSP domain|Schizosaccharomyces pombe|chr 2|||Manual 25 8.2
SPAC1F3.03 |||Lgl family protein|Schizosaccharomyces pombe|chr 1... 25 8.2
SPAC521.04c |||calcium permease |Schizosaccharomyces pombe|chr 1... 25 8.2
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 25 8.2
SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p... 25 8.2
>SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 324
Score = 39.5 bits (88), Expect = 5e-04
Identities = 30/125 (24%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Frame = +1
Query: 352 ETHEEKREAYINELRSRLKD-HLEGVEKTR----LTLEQQTAEVYKAIEDKMTTAADKRD 516
ET+E ++E +N L +++D + EK+ L ++ T + K ++ ++R
Sbjct: 89 ETNETQQEDLLNTLLQQMEDTKITTAEKSSVQSSLNTKENTPQQPKKSRNRQKERLERRK 148
Query: 517 ENLKKMIERLREHEEQVRKVRAGNQEKFQQ-LESAIQEKLQQAADRRLLIEAEQREKLRN 693
+KKM E+ E++ ++ ++KF + LE A + AD L + + +
Sbjct: 149 AEMKKMSEQAELESEKMADLKNEEKKKFSKILEEAGLVAVDIPADGNCLFASISHQLNYH 208
Query: 694 HNIKL 708
HN+KL
Sbjct: 209 HNVKL 213
Score = 27.9 bits (59), Expect = 1.5
Identities = 17/81 (20%), Positives = 41/81 (50%)
Frame = +1
Query: 433 TRLTLEQQTAEVYKAIEDKMTTAADKRDENLKKMIERLREHEEQVRKVRAGNQEKFQQLE 612
T+ T+ Q K +E+ ++ ++ E K+ ++ +E +K + Q+K Q+E
Sbjct: 10 TQTTIPTQQKRKSKKMEELLSKQREECKELQSKITNLRKQLKEGNKKQKRALQQKISQME 69
Query: 613 SAIQEKLQQAADRRLLIEAEQ 675
+ + +K A +R+ L + ++
Sbjct: 70 ADLSQK--HATERQKLDKGDE 88
Score = 27.9 bits (59), Expect = 1.5
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = +1
Query: 508 KRDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKL 687
K +E L K E +E + ++ +R +E ++ + A+Q+K+ Q A +R+KL
Sbjct: 24 KMEELLSKQREECKELQSKITNLRKQLKEGNKKQKRALQQKISQMEADLSQKHATERQKL 83
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 35.9 bits (79), Expect = 0.006
Identities = 26/126 (20%), Positives = 59/126 (46%)
Frame = +1
Query: 304 TNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIE 483
T N I++ + + + HEE + ELR++++++++ E+ ++ E+Y+
Sbjct: 85 TLNNILSMRTETGSMAKAHEEVSQQINTELRNKIREYIDQTEQQKVVAANAIEELYQKKT 144
Query: 484 DKMTTAADKRDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLI 663
++K+D + +L + Q +K+ +K+ K++QAA +
Sbjct: 145 ALEIDLSEKKDA-YEYSCNKLNSYMRQTKKMTGRELDKYNL-------KIRQAALAVKKM 196
Query: 664 EAEQRE 681
+AE RE
Sbjct: 197 DAEYRE 202
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 35.5 bits (78), Expect = 0.008
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 6/117 (5%)
Frame = +1
Query: 289 IRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEV 468
+ SE+T + T E +E+ RE I LRS L D + VE + E + E+
Sbjct: 974 LASEKTLEMMNETHEQFKHLVESEISTREEKITSLRSELLDLNKRVEVLKEEKESSSKEL 1033
Query: 469 YKAIED----KMTTAADKRD-ENLKKMIER-LREHEEQVRKVRAGNQEKFQQLESAI 621
K +ED K + + K+D E ++ +R + +E + K R+ +E ES I
Sbjct: 1034 AKQLEDAVREKDSALSFKKDYEKIRSDADRVITSLKEDIEKERSLMKECHSNYESEI 1090
Score = 33.1 bits (72), Expect = 0.041
Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 6/117 (5%)
Frame = +1
Query: 316 IVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEK--TRLTLEQQTAEVYKAIEDK 489
I+A + L A+ E +E+ E +NE R+K+ E +K + T + + + +E+K
Sbjct: 1592 ILAARSELVAEKEKTKEELENQLNEKSQRIKELEEQAQKNSSENTHDNIDDMIKQQVEEK 1651
Query: 490 MTTAADKRDENLKKMIE----RLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAAD 648
+ + D LKK++ R + K Q K QLE I+ +Q ++
Sbjct: 1652 LKENSANFDVKLKKVVAETEFRSKAKISVYEKKTRDLQNKITQLEETIENLNKQLSN 1708
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 35.1 bits (77), Expect = 0.010
Identities = 34/129 (26%), Positives = 58/129 (44%)
Frame = +1
Query: 328 KEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAAD 507
K + E +EK+ R++ + E+ + E+Q E K + ++ AA
Sbjct: 65 KRIYNGSAEAGKEKKLQKQRAQEERIRQ--KEAERLKREKERQQREQEKKLREQEKIAAK 122
Query: 508 KRDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKL 687
K E K ER+R E+Q RK +E+ Q+L +E+ Q+ ++L + Q+ KL
Sbjct: 123 KMKELEKLEKERIRLQEQQRRK-----EERDQKLRE--KEEAQRLRQEQILNKERQQLKL 175
Query: 688 RNHNIKLAE 714
N K E
Sbjct: 176 NNFFTKGVE 184
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 34.3 bits (75), Expect = 0.018
Identities = 22/110 (20%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
Frame = +1
Query: 331 EALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIE--DKMTTAA 504
E L K+++ ++++ INEL R+K + V + T+++ ++ E +++ A
Sbjct: 530 EGLTLKIDSITKEKDRLINELEQRIKSYEVNVSELNGTIDEYRNKLKDKEETYNEVMNAF 589
Query: 505 DKRDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRR 654
+D +L++ E + + +++ +++ N EK + S+++E + R
Sbjct: 590 QYKDNDLRRFHESINKLQDREKEL-TSNLEKKNLVISSLRETVAMLEKER 638
>SPAC19A8.07c |||U3 snoRNP-associated protein Imp4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 289
Score = 33.1 bits (72), Expect = 0.041
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Frame = +1
Query: 322 ATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQ--QTAEVYKAIEDKMT 495
A +E + ++E +EA +NE R L+ LEG ++ L++ Q + YK E + T
Sbjct: 5 AVRERRQFIYKRNQELQEAKLNEKRRALRKALEGNKELNKDLQEDSQLQKDYKYDESRAT 64
Query: 496 TAADKRDENLKKMIERLREHEEQV 567
++ + NL RL E E +V
Sbjct: 65 --QEETETNLDDEYHRLGEREPKV 86
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 33.1 bits (72), Expect = 0.041
Identities = 26/122 (21%), Positives = 57/122 (46%), Gaps = 2/122 (1%)
Frame = +1
Query: 298 EQTNNFIVATKEA-LDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLE-QQTAEVY 471
+Q VA ++A +E K E + + + SR+K + +E TRL + Q E Y
Sbjct: 460 KQVEELTVALNSGKMNAIVEAESSKNELWDSMMVSRMKTQEQSIELTRLYKQLQDIEEDY 519
Query: 472 KAIEDKMTTAADKRDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADR 651
+ +M + + L++ +E + + + ++V + + ++ E + KL+ A+R
Sbjct: 520 ENKLMRMEQQWREDVDQLQEYVEEITQELQDTKEVLSKSSKESDDYEEVV-GKLRTEAER 578
Query: 652 RL 657
+
Sbjct: 579 EI 580
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 32.7 bits (71), Expect = 0.054
Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Frame = +1
Query: 352 ETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDENLKK 531
E +EE + + E +++K+ +KTR + EQQT + IE+++ +K ++ LKK
Sbjct: 402 EKNEEVKS--LREKAAKVKNDCTSEKKTRQSYEQQTVK----IEEQLKFLLNK-EKKLKK 454
Query: 532 MIERLREHEEQVRKVRAGNQEKFQQLESAIQE---KLQQ 639
IE L + + + + Q+L S I + +LQQ
Sbjct: 455 SIEALSFEKSEAENSLSSHDIDSQKLNSEIADLSLRLQQ 493
>SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 380
Score = 31.9 bits (69), Expect = 0.094
Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Frame = +1
Query: 289 IRSEQTNNFIVATKEAL-DAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAE 465
I + +TN + +E L + K + K+E Y RL + +++ + +T
Sbjct: 279 INTTETNIYERYRREQLTNRKSGIPKLKKEHY-----ERLNNEKRAIQQKITQMTNETES 333
Query: 466 VYKAIEDKMTTAADKRDENLKKMIERLREHEEQVRKVRA 582
++A E+KM D + L + ER+R E Q+ +++
Sbjct: 334 FFQAKEEKMIETRDALNSELSEYHERIRALETQIESLKS 372
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 31.5 bits (68), Expect = 0.12
Identities = 26/103 (25%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
Frame = +1
Query: 322 ATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYK-AIEDKMTT 498
A K+ + +++ +EK++ + + K + EK +L +QQ A+ K A E ++
Sbjct: 637 ARKKREEQRLKREQEKKQQELERQKREEKQKQKEREK-KLKKQQQEADREKMAREQRLRE 695
Query: 499 AADKRDENLKKMIERLREHEEQVRK---VRAGNQEKFQQLESA 618
+KR +K E+L + EE+ R+ + ++EK ++L A
Sbjct: 696 EEEKRILEERKRREKLDKEEEERRRRELLEKESEEKERRLREA 738
Score = 29.5 bits (63), Expect = 0.50
Identities = 32/161 (19%), Positives = 68/161 (42%), Gaps = 9/161 (5%)
Frame = +1
Query: 175 VEEIQEKLKAAEER--RRSLEXXXXXXXXXXXXXXXXXSRIRSEQTNNFIVATKEALDAK 348
+EEI+E+ K +ER ++ E R R E A ++AL+AK
Sbjct: 573 LEEIEEENKRKQERELKKIREKEKKRDKKKQLKLAKEEERQRREAERLAEQAAQKALEAK 632
Query: 349 M--ETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYK-----AIEDKMTTAAD 507
E +++ E + + + + LE ++ +++ + K A +KM
Sbjct: 633 RQEEARKKREEQRLKREQEKKQQELERQKREEKQKQKEREKKLKKQQQEADREKMAREQR 692
Query: 508 KRDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEK 630
R+E K+++E + E+ ++ + + + ES +E+
Sbjct: 693 LREEEEKRILEERKRREKLDKEEEERRRRELLEKESEEKER 733
>SPCC737.06c |||glutamate-cysteine ligase regulatory subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 287
Score = 29.9 bits (64), Expect = 0.38
Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +1
Query: 463 EVYKAIED-KMTTAADKRDENLKKMIERLREHEEQVRKVRAGNQEKFQ 603
E+ KA+E+ K+T DENLKK I+ L E+ +K+ G QE+++
Sbjct: 35 ELVKALENVKLTKFTGDGDENLKKNIKVLVPVNEKPQKL-DGKQEEYE 81
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 29.5 bits (63), Expect = 0.50
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 2/116 (1%)
Frame = +1
Query: 343 AKMETHEE-KREAYINELR-SRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRD 516
A++E E KREA R + K E EK + E++ +A E+ A +K
Sbjct: 553 ARLEAEENAKREAEEQAKREAEEKAKREAEEKAKREAEEKAKR--EAEENAKREAEEKAK 610
Query: 517 ENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREK 684
++ +R E + + +E ++ + +EK ++ A+ + EAE+ K
Sbjct: 611 REAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEENAK 666
Score = 29.5 bits (63), Expect = 0.50
Identities = 28/117 (23%), Positives = 50/117 (42%), Gaps = 2/117 (1%)
Frame = +1
Query: 340 DAKMETHEE-KREAYINELR-SRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKR 513
+AK E E+ KREA R + K E EK + E+ +A E A +K
Sbjct: 560 NAKREAEEQAKREAEEKAKREAEEKAKREAEEKAKREAEENAKR--EAEEKAKREAEEKA 617
Query: 514 DENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREK 684
++ +R E + + +E ++ + +EK ++ A+ EAE++ K
Sbjct: 618 KREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEENAKREAEEKAK 674
Score = 28.3 bits (60), Expect = 1.2
Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 6/128 (4%)
Frame = +1
Query: 319 VATKEALDAKMETHEEKR-EAYINELR-SRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKM 492
+ K +AK + E+ R EA N R + + E EK + E+ KA +
Sbjct: 537 IQEKAEAEAKRKAEEKARLEAEENAKREAEEQAKREAEEKAKREAEE------KAKREAE 590
Query: 493 TTAADKRDENLKKMIER--LREHEEQVRK--VRAGNQEKFQQLESAIQEKLQQAADRRLL 660
A + +EN K+ E RE EE+ ++ +E ++ + +EK ++ A+ +
Sbjct: 591 EKAKREAEENAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAK 650
Query: 661 IEAEQREK 684
EAE++ K
Sbjct: 651 REAEEKAK 658
Score = 27.9 bits (59), Expect = 1.5
Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 3/124 (2%)
Frame = +1
Query: 322 ATKEALD-AKMETHEE-KREAYINELRSRLKD-HLEGVEKTRLTLEQQTAEVYKAIEDKM 492
A +EA + AK E E+ KREA R ++ E EK + E++ +A E
Sbjct: 569 AKREAEEKAKREAEEKAKREAEEKAKREAEENAKREAEEKAKREAEEKAKR--EAEEKAK 626
Query: 493 TTAADKRDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAE 672
A +K ++ +R E + + +E + + +EK ++ A+ EAE
Sbjct: 627 REAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEENAKREAEEKAKREAEENAKREAE 686
Query: 673 QREK 684
++ K
Sbjct: 687 EKVK 690
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 29.5 bits (63), Expect = 0.50
Identities = 19/68 (27%), Positives = 37/68 (54%)
Frame = +1
Query: 508 KRDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKL 687
++DE K+ ++ R+ EQV + +EK+ +LE + +LQ A R ++A+ +
Sbjct: 436 EKDEASKERLKAARKEAEQVEEETRPIREKY-ELEKSRGSELQDAKRRLDELKAKAEDAE 494
Query: 688 RNHNIKLA 711
R ++ LA
Sbjct: 495 RRNDFTLA 502
>SPAC17C9.11c |||zinc finger protein, zf-C2H2 type/UBA domain
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 240
Score = 29.5 bits (63), Expect = 0.50
Identities = 30/123 (24%), Positives = 59/123 (47%)
Frame = +1
Query: 322 ATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTA 501
+TK + D ET EE ++ EL+ ++ E + E++ E A+E+K T
Sbjct: 22 STKTSHDQFEETEEEIKKRSPEELKQAIEALREKAK------EKKEKERILALEEKKT-- 73
Query: 502 ADKRDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQRE 681
N K + + E + +RK++ +Q + + L+ Q+K + A R+ ++ +R+
Sbjct: 74 ------NYKILQKSNDETAQAMRKMQ--DQARLRDLQKIRQQKAEDAEQRKKILAEIERD 125
Query: 682 KLR 690
K R
Sbjct: 126 KKR 128
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 29.1 bits (62), Expect = 0.66
Identities = 26/134 (19%), Positives = 62/134 (46%), Gaps = 5/134 (3%)
Frame = +1
Query: 319 VATKEALDAKMETHEE--KREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKM 492
V TK+ + + + E+ K++ + S +D L E + AE + + K
Sbjct: 177 VKTKKEKEREKKEREKLRKKQQQAKKKGSTGEDTLASSEVSSEVDISTPAENDSSAKGKQ 236
Query: 493 TTAADKRDEN---LKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLI 663
+ ++ N L+KM+E R EE+ +++R + + + E + E +++A +
Sbjct: 237 AAGSKRKGPNVTALQKMLEEKRAREEEEQRIRE-EEARIAEEEKRLAE-VEEARKEEARL 294
Query: 664 EAEQREKLRNHNIK 705
+ +++E+ + +K
Sbjct: 295 KKKEKERKKKEEMK 308
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.7 bits (61), Expect = 0.88
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = +1
Query: 34 AMEVETKSTEIRCQEMSKGGLAYEVILAEPVGVPVPRRADSPEKTPSVEEIQEKLKAAEE 213
A+ ETKST ++ GG A +A P +P P +P P+ E +++
Sbjct: 867 AITPETKST---VNQIMSGGEALAAPVAVPAPIPAPVAEPAPPAAPAKEVVEKAPSPPAT 923
Query: 214 RRRS 225
R +S
Sbjct: 924 RPKS 927
>SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein
Ndc80|Schizosaccharomyces pombe|chr 2|||Manual
Length = 624
Score = 28.7 bits (61), Expect = 0.88
Identities = 14/56 (25%), Positives = 30/56 (53%)
Frame = +1
Query: 382 INELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDENLKKMIERLR 549
+N+L + L+D L G+E +RLT + + + A D + L++ +++L+
Sbjct: 494 VNDLIAELQDELRGIE-SRLTSVLSECNMLRETASEEKNAFDAESDKLERELQQLK 548
>SPAC18B11.02c |||pseudouridylate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 394
Score = 28.7 bits (61), Expect = 0.88
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +3
Query: 192 EAEGSRREET*LGS**DGRHCSEDGQDRGGVPHPQRADE*LH 317
EAE R + LG G+HCSE G P P+ LH
Sbjct: 320 EAEAKARRDKRLGELLTGKHCSECGTPLYSDPSPEELGIWLH 361
>SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 419
Score = 28.7 bits (61), Expect = 0.88
Identities = 21/74 (28%), Positives = 33/74 (44%)
Frame = +1
Query: 466 VYKAIEDKMTTAADKRDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAA 645
+Y+A+ +K A K E + K E RE E + + FQ + +EK+ Q
Sbjct: 343 IYEALYEKFLKAC-KDLEEVSKSYEESREEIEALHETFTEEVTSFQSTKRLKEEKIIQEK 401
Query: 646 DRRLLIEAEQREKL 687
R + E R+KL
Sbjct: 402 SRVDKMIDEYRQKL 415
>SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 28.3 bits (60), Expect = 1.2
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = +1
Query: 406 KDHLEGVEKTRLTLEQQTAEVYKA-IEDKMTTAADKRDENLKKMIERLREHEEQVRKVRA 582
K LE R LE++ E + ++D+ + E KK ER+R EEQ K +
Sbjct: 105 KQRLEQERFNRELLEKKRIEAERQRLKDEEERRKKELMEKEKKEKERIRLIEEQ--KHKE 162
Query: 583 GNQEKFQQLESAIQEKLQQAADRRL 657
Q + +Q + + K ++A ++R+
Sbjct: 163 NEQRRLKQEQIDAKRKEEEAREKRM 187
>SPAC17G6.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 433
Score = 28.3 bits (60), Expect = 1.2
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +1
Query: 511 RDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRL---LIEAEQRE 681
+D +L+ +E L + E +++ + + +E A QE LQQ R+ L E EQ
Sbjct: 19 QDHSLQMALEELNQQIEVIQRQEEQLALRKKAIEDARQEVLQQIQHRKFRQYLHEREQEA 78
Query: 682 KLRNHNIK 705
+L+ + ++
Sbjct: 79 RLQEYYLE 86
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 27.9 bits (59), Expect = 1.5
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 4/109 (3%)
Frame = +1
Query: 352 ETHEEKREAYINELRSRLKDHL--EGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDENL 525
E EEK +A ++ R+ D + +EK + EQQ K +D + A D +
Sbjct: 302 EEGEEKEDA--QNIKERMVDFCFSKFMEKNQQRREQQDKGENKKRQDDVDQATDNNTNTI 359
Query: 526 KKMIERLREHEEQVRKVRAGNQEKF-QQLE-SAIQEKLQQAADRRLLIE 666
+ E+ + EE+ V A + QQ +AI +KL + D+ + E
Sbjct: 360 LEDDEKDNDEEEEEEIVNAREKNLLNQQFNWTAIVKKLGENWDQLVRFE 408
>SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|chr
1|||Manual
Length = 474
Score = 27.9 bits (59), Expect = 1.5
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +1
Query: 556 EEQVRKVRAGNQEKFQQLESAIQEK 630
EE+ R ++A NQ +QLE AIQE+
Sbjct: 374 EEERRALKADNQTLQKQLEKAIQER 398
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase
Tlh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1919
Score = 27.9 bits (59), Expect = 1.5
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 4/109 (3%)
Frame = +1
Query: 352 ETHEEKREAYINELRSRLKDHL--EGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDENL 525
E EEK +A ++ R+ D + +EK + EQQ K +D + A D +
Sbjct: 302 EEGEEKEDA--QNIKERMVDFCFSKFMEKNQQRREQQDKGENKKRQDDVDQATDNNTNTI 359
Query: 526 KKMIERLREHEEQVRKVRAGNQEKF-QQLE-SAIQEKLQQAADRRLLIE 666
+ E+ + EE+ V A + QQ +AI +KL + D+ + E
Sbjct: 360 LEDDEKDNDEEEEEEIVNAREKNLLNQQFNWTAIVKKLGENWDQLVRFE 408
>SPAC8C9.07 |||rRNA processing protein Fyv7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 144
Score = 27.9 bits (59), Expect = 1.5
Identities = 15/65 (23%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +1
Query: 421 GVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDENLKKM--IERLREHEEQVRKVRAGNQE 594
G K + + + E+Y+ E+K +K D ++K IE+ ++ EQ R + + +
Sbjct: 64 GERKRKFSKKSHLQELYERSEEKRRIQQEKEDAKVQKRLEIEKKQKDREQTRNMLSKKTK 123
Query: 595 KFQQL 609
+ Q +
Sbjct: 124 RGQPI 128
>SPAC4F10.17 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 123
Score = 27.5 bits (58), Expect = 2.0
Identities = 23/95 (24%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Frame = +1
Query: 442 TLEQQTAEVYKAIEDKMTTAADKRDENLKKMIERLREHEEQVRKVRAGN------QEKFQ 603
TLE+ ++ + ++ A+ K DEN K + + E+ +Q K A + Q+K +
Sbjct: 29 TLEEAPEKISQTVKKATGKASKKIDENKDKSPQEMAENAKQSVKQTAKDAKDTDYQQKAK 88
Query: 604 QLESAIQEKLQQAADRRLLIEAEQREKL-RNHNIK 705
I+E+ Q ++ ++E +RE + R+ +K
Sbjct: 89 DAGKKIKEEFSQRSEN--VLEETRREGMNRDGGVK 121
>SPCC24B10.11c |||THO complex subunit 7 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 202
Score = 26.6 bits (56), Expect = 3.5
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +1
Query: 346 KMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDENL 525
K +T E + I++L L V + L +Q E+ K I K + ++ E++
Sbjct: 74 KTQTFCEAEKTEISQLEQDLL-----VAQEELRKREQYDELAKPIMSKGLRSRTEQQESI 128
Query: 526 KKMIERLRE-HEEQVRKVRAGNQEK 597
K+ + +RE EE V+A N K
Sbjct: 129 GKLQDAIRELEEENANYVKAWNLRK 153
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 26.6 bits (56), Expect = 3.5
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +1
Query: 448 EQQTAEVYKAIEDKMTTAADKRDENLKKMIERLREHEEQ 564
E + AE K I D+ ++K DE L+ + ERLRE EE+
Sbjct: 169 ENRRAESNK-IMDETIQKSEKIDELLQYIEERLRELEEE 206
>SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering
component Pep7 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 536
Score = 26.2 bits (55), Expect = 4.7
Identities = 17/74 (22%), Positives = 37/74 (50%)
Frame = +1
Query: 355 THEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDENLKKM 534
T E +RE + + + +++ E + +TR+ LE+Q V IED A ++ ++ +
Sbjct: 456 TSESERE--LEKKKEQVEKKQEELMQTRIVLEEQVFLVENMIED---AKAKRKFSEVETL 510
Query: 535 IERLREHEEQVRKV 576
+ L E++ +
Sbjct: 511 LSSLAPLHEEIHSI 524
>SPCC569.08c |ade5|ade8|phosphoribosylglycinamide
formyltransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 207
Score = 25.8 bits (54), Expect = 6.2
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 88 GGLAYEVILAEPVGVPVPRRADSPEKTPSVEEIQEKLKAAE 210
G + + VI A G P+ + T S+E ++EK+ AAE
Sbjct: 151 GAMVHWVIAAVDEGKPIIVQEVPILSTDSIEALEEKIHAAE 191
>SPAC4H3.06 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 131
Score = 25.4 bits (53), Expect = 8.2
Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Frame = +1
Query: 439 LTLEQQTAEVYKAIEDKMTTAADKRD--ENL----KKMIERLREHEEQVRKVRAGNQEKF 600
L ++ A++YK +ED + +K+ E + + + E L E +R +A ++
Sbjct: 9 LRAQETRAQLYKELEDALNANQEKKIGLEQMGIIVQLVTEGLNEVSSDIRNYQASLTKEL 68
Query: 601 QQLESAIQEK 630
+ L ++QEK
Sbjct: 69 KLLVDSLQEK 78
>SPBC16G5.05c |||MSP domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 383
Score = 25.4 bits (53), Expect = 8.2
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 157 PEKTPSVEEIQEKLKAAEERRRSLE 231
PE TP+VE++ E L E R SL+
Sbjct: 301 PESTPAVEKVSENL--GSETRESLQ 323
>SPAC1F3.03 |||Lgl family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1004
Score = 25.4 bits (53), Expect = 8.2
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +1
Query: 376 AYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRD 516
A IN+ ++ + L G+E T LE+ +AE I+D + A K+D
Sbjct: 949 AQINDHLAQRGNMLGGIENTMDDLEEMSAEWANEIKDSL--AGTKKD 993
>SPAC521.04c |||calcium permease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 881
Score = 25.4 bits (53), Expect = 8.2
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 142 RRADSPEKTPSVEEIQEKLK 201
RRAD PE+TPS ++ L+
Sbjct: 21 RRADRPEETPSSSVYEQNLR 40
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 25.4 bits (53), Expect = 8.2
Identities = 9/44 (20%), Positives = 25/44 (56%)
Frame = +1
Query: 382 INELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKR 513
+ E + ++ +EG++ + L + +E+ ++E ++TT + R
Sbjct: 407 LKERQVAVRARIEGIKAHEMFLNNRVSEINSSLEKQLTTQKELR 450
>SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 464
Score = 25.4 bits (53), Expect = 8.2
Identities = 16/62 (25%), Positives = 26/62 (41%)
Frame = +1
Query: 295 SEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYK 474
SEQT A + + K E E L++ KD+ ++K LE++ + K
Sbjct: 391 SEQTQLVEEALTKVMKEKYREKENNLELLETNLKTHHKDYKHALKKRITALEEEKNRLIK 450
Query: 475 AI 480
I
Sbjct: 451 EI 452
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.310 0.125 0.321
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,191,587
Number of Sequences: 5004
Number of extensions: 35047
Number of successful extensions: 207
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 200
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 335201398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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