Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0136
(716 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 31 0.027
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 30 0.062
AJ439353-9|CAD27931.1| 391|Anopheles gambiae transcription fact... 30 0.082
AB090820-1|BAC57915.1| 527|Anopheles gambiae gag-like protein p... 29 0.14
AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein p... 27 0.77
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 26 1.3
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 25 2.3
AB090816-1|BAC57907.1| 455|Anopheles gambiae gag-like protein p... 25 3.1
AF042732-2|AAC18057.1| 179|Anopheles gambiae TU37B2 protein. 24 5.4
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 23 7.2
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona... 23 9.5
AJ010194-1|CAA09033.1| 684|Anopheles gambiae prophenoloxidase p... 23 9.5
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 31.5 bits (68), Expect = 0.027
Identities = 16/62 (25%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Frame = +1
Query: 451 QQTAEVYKAIEDKMTTAADKRDENLKKMIERLREHEEQVRKVRAG---NQEKFQQLESAI 621
QQ E + +++ +A K DE L++M +L + ++ ++K++ N+++ QQL +
Sbjct: 715 QQRREQLQRELNELNSAYAKEDERLQEMTRKLHQRQQHMKKLQQELLTNEQQLQQLAGVV 774
Query: 622 QE 627
E
Sbjct: 775 FE 776
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 30.3 bits (65), Expect = 0.062
Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Frame = +1
Query: 352 ETHEEKREAYINELRSRLKDHLEGVEK---TRLTLEQQTAEVYKAIEDKMTTAADKRDE- 519
E + +K + IN + ++ + K R LE++ ++ + +E+ M A +K E
Sbjct: 927 ERNVQKSKDKINSMEDEVEAAQSAIRKGNDERTQLEEEANKLREELEE-MKLAIEKAHEG 985
Query: 520 --NLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAAD 648
++KK I L++ E + + R +F+Q+ I+ KLQ+ D
Sbjct: 986 SSSIKKEIVALQKREAEGKMKRL----EFEQILQTIETKLQETKD 1026
>AJ439353-9|CAD27931.1| 391|Anopheles gambiae transcription factor
protein.
Length = 391
Score = 29.9 bits (64), Expect = 0.082
Identities = 22/86 (25%), Positives = 39/86 (45%)
Frame = +1
Query: 337 LDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRD 516
+D+ ++ + A +SRLK E K + +T E E+ + A
Sbjct: 126 IDSGRKSFRKSTAAKTAATQSRLKQRFEAERKRTRVI--RTEEYIPTQEELLEEAEITER 183
Query: 517 ENLKKMIERLREHEEQVRKVRAGNQE 594
EN+K + ER R E + +K+R N++
Sbjct: 184 ENIKSL-ERFRRMELEKQKIRPTNKK 208
>AB090820-1|BAC57915.1| 527|Anopheles gambiae gag-like protein
protein.
Length = 527
Score = 29.1 bits (62), Expect = 0.14
Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +3
Query: 255 SEDGQDRGGVPHPQRADE*--LHRRHQGGSRRQDGDPRGKTRGLHQR 389
++ G + GV PQ++ + HR+HQ +Q+G + + G+HQ+
Sbjct: 248 NQRGNKQNGVNLPQQSAQRQPAHRQHQQWPHQQNGQQQQQRMGIHQQ 294
>AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein
protein.
Length = 429
Score = 26.6 bits (56), Expect = 0.77
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +1
Query: 532 MIERLREHEEQVRKVRAGNQEKFQQLESA--IQEKLQQAADRRLLIEAEQREKLR 690
M E +R+ + + A N+ ++L + K Q+ +RR LI E+ EK+R
Sbjct: 1 MREAIRQLTNSLAEANARNERINEELTQMRILMTKQQEYTERRELIAREEMEKMR 55
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 25.8 bits (54), Expect = 1.3
Identities = 25/106 (23%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Frame = +1
Query: 364 EKREAYINELRSRLKDHLE-GVEKTRLTLEQ--QTAEVYKAIEDKMTTAADKRDENLKKM 534
EK++A +NEL + +++ +E +EK R E + +V + IE R L K
Sbjct: 186 EKKDAKLNELYAVIREEIEPKLEKLRKEREHYIEFQKVCRDIEYLTRLYVSYRYLQLCKG 245
Query: 535 IERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAE 672
+E ++ V +++K + + Q Q+A + + I+ E
Sbjct: 246 VEESERTIANLQSVIGESEQKIESNCATAQTLEQEAKELQERIDTE 291
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 25.0 bits (52), Expect = 2.3
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +1
Query: 283 SRIRSEQTNNFIVATKEAL-DAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQT 459
S+ R + + + +E L DAK++ HE+ R E+ K + GV + + Q T
Sbjct: 476 SKERIHELQSELDNVREQLGDAKIDKHEDARRKKKQEVVELFKLEVPGVYDRMINMCQPT 535
Query: 460 AEVYKAIEDKM 492
+ Y K+
Sbjct: 536 HKRYNVAVTKV 546
>AB090816-1|BAC57907.1| 455|Anopheles gambiae gag-like protein
protein.
Length = 455
Score = 24.6 bits (51), Expect = 3.1
Identities = 15/58 (25%), Positives = 32/58 (55%)
Frame = +1
Query: 517 ENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLR 690
+NL++ ++ +EQ+ ++R +EK ++ Q + ++A R +A+ EKLR
Sbjct: 43 QNLEETRKKNESLQEQLTQLRWLMEEKLREQREDAQRREEEARRREEAAKAD-NEKLR 99
>AF042732-2|AAC18057.1| 179|Anopheles gambiae TU37B2 protein.
Length = 179
Score = 23.8 bits (49), Expect = 5.4
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 445 LEQQTAEVYKAIEDKMTTAADKRDENLKKMIERLRE 552
L+ + + K +E + T + D+N KK IER E
Sbjct: 36 LKGEVEKQSKKLEKRKETLGESLDKNHKKKIERDEE 71
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 23.4 bits (48), Expect = 7.2
Identities = 7/18 (38%), Positives = 15/18 (83%)
Frame = +1
Query: 166 TPSVEEIQEKLKAAEERR 219
TP++EE++ + + AE+R+
Sbjct: 298 TPAIEELENECRIAEQRQ 315
>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
anion exchanger protein.
Length = 1102
Score = 23.0 bits (47), Expect = 9.5
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +1
Query: 388 ELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDENLKKMIERLR-EHEEQ 564
ELRS L + ++ ++LEQ V + + + T + RD+ + +++R + +HE
Sbjct: 158 ELRSLLLNGTVMLDMEAVSLEQIAELVCENMVNSGTLPVEARDKVIDALLKRHKHQHEFG 217
Query: 565 VRKVR 579
+K R
Sbjct: 218 SKKSR 222
>AJ010194-1|CAA09033.1| 684|Anopheles gambiae prophenoloxidase
protein.
Length = 684
Score = 23.0 bits (47), Expect = 9.5
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = -1
Query: 131 TPTGSASITSYARPPFDISWQRISVDLVSTSMAST 27
TP S+ +ARP +++ +S+ +T +A T
Sbjct: 650 TPNSVGSLQEFARPYRNMATTPVSIRFTNTVIART 684
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.310 0.125 0.321
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 562,421
Number of Sequences: 2352
Number of extensions: 9162
Number of successful extensions: 34
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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