Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0132
         (682 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    28   0.062
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    24   1.0  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 28.3 bits (60), Expect = 0.062
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
 Frame = +2

Query: 404 ICKYIQ*FVYLFGTVHSYNI--VIYLVVVR**CL*LYYVIMTY*FLTVPFLFLVC 562
           +C Y   + ++  TVH   +  + Y VV     L +YY    +   TV  LFL+C
Sbjct: 111 LCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIYYFYCAFIIFTVHLLFLLC 165



 Score = 22.6 bits (46), Expect = 3.1
 Identities = 13/44 (29%), Positives = 18/44 (40%)
 Frame = +2

Query: 431 YLFGTVHSYNIVIYLVVVR**CL*LYYVIMTY*FLTVPFLFLVC 562
           ++  TVH      Y        L +YY    +   TV  LFL+C
Sbjct: 89  FIIFTVHFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFLLC 132


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = +1

Query: 535 DGAIFIFSLWYLTRQCVTNVKLTSE*KFMWVY 630
           + ++FIF L +L+ +C    K  ++  F+W +
Sbjct: 142 NASLFIFDLIFLSFRCTKLCKEANKTAFLWYH 173


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,281
Number of Sequences: 336
Number of extensions: 2541
Number of successful extensions: 10
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)