Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0126
         (691 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U56965-2|AAB52667.3|  581|Caenorhabditis elegans Hypothetical pr...    30   1.4  
U41992-4|AAL02506.2|  876|Caenorhabditis elegans Hypothetical pr...    29   4.1  
Z81514-7|CAH60785.1|  167|Caenorhabditis elegans Hypothetical pr...    28   5.5  
AL117203-10|CAB60424.2|  855|Caenorhabditis elegans Hypothetical...    28   7.2  

>U56965-2|AAB52667.3|  581|Caenorhabditis elegans Hypothetical
           protein C15H9.5 protein.
          Length = 581

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = +3

Query: 291 YLTHL-CTPSRHRHYNFHKFLLGLTGLEVLRVSFHG 395
           Y +HL C  +    Y  HKF+  L  L+ L V FHG
Sbjct: 274 YWSHLLCRSNSENIYRVHKFMAVLVFLKALSVFFHG 309


>U41992-4|AAL02506.2|  876|Caenorhabditis elegans Hypothetical
           protein F32E10.3 protein.
          Length = 876

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +3

Query: 120 PTIVFTFPTPAPEVPELTDIV 182
           PT+  T P+PAP+VP L +I+
Sbjct: 837 PTLATTKPSPAPKVPTLEEIL 857


>Z81514-7|CAH60785.1|  167|Caenorhabditis elegans Hypothetical
           protein F26F2.8 protein.
          Length = 167

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = -2

Query: 396 LHENLREVPRGPSGLVEIYENYSDDDVTAYTDGLSNLVHETDLND 262
           + EN     RGPSG V++ + +SDD      +G +N++ +   +D
Sbjct: 28  MKENFLTKQRGPSGRVQLPKTFSDD-----CNGSTNIIKDRSTDD 67


>AL117203-10|CAB60424.2|  855|Caenorhabditis elegans Hypothetical
           protein Y48C3A.14 protein.
          Length = 855

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -1

Query: 616 SFAKRLLLSC*VSCGGARAVVSKSHPSWLSLCS 518
           S +   +  C   CGG   + ++SHP W   C+
Sbjct: 710 SISSNGVCGCLQDCGGVMLLDTQSHPKWRMTCN 742


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,789,050
Number of Sequences: 27780
Number of extensions: 332945
Number of successful extensions: 1153
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1153
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)