Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0124
(715 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 259 2e-70
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 144 8e-36
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 140 1e-34
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 129 3e-31
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 124 1e-29
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 116 4e-27
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 107 2e-24
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 103 3e-23
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 56 7e-09
SPBC947.05c |||ferric-chelate reductase |Schizosaccharomyces pom... 29 0.50
SPBC30D10.03c |||IMP 5'-nucleotidase |Schizosaccharomyces pombe|... 28 1.2
SPAC959.03c |||U3 snoRNP-associated protein Utp7|Schizosaccharom... 26 4.7
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 259 bits (635), Expect = 2e-70
Identities = 125/206 (60%), Positives = 157/206 (76%)
Frame = +2
Query: 86 DEYGRPFIILRDQDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVT 265
D+ G PFI++RDQ++++RL G DA+KSHI A + +A+ +RTSLGPRGLDK+++S DG++T
Sbjct: 12 DDQGNPFILVRDQEKKRRLHGIDAVKSHILATKTVANIVRTSLGPRGLDKILISPDGEIT 71
Query: 266 VTNDGATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKGIH 445
VTNDGATIL M+VEHQI KLLVQL++SQDDEIGDGTTGVVVLAGALLEQA L+DKGIH
Sbjct: 72 VTNDGATILDQMEVEHQIAKLLVQLSKSQDDEIGDGTTGVVVLAGALLEQAEALIDKGIH 131
Query: 446 PIRIADGYEMAAALALTHLDSVS*AFPVNKNTRENLIKVAMTTLGSKVVVKCHRLMAEIX 625
PIRIADGYE A +A+ HLD++S + NL + A T+LGSKVV K H A I
Sbjct: 132 PIRIADGYEKACQVAVKHLDAISDVVDFSPENTTNLFRSAKTSLGSKVVSKAHDHFANIA 191
Query: 626 XXXXXXXXXXETRDVNFELIKVEGKV 703
+ +DV+FELIKV+GKV
Sbjct: 192 VDAVLSVADLQRKDVDFELIKVDGKV 217
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 144 bits (350), Expect = 8e-36
Identities = 71/153 (46%), Positives = 104/153 (67%)
Frame = +2
Query: 134 KRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEH 313
++++G D ++ A IA+ +++SLGP GLDK++V GDVTVTNDGATIL ++DVEH
Sbjct: 15 EKISGEDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATILSLLDVEH 74
Query: 314 QIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALAL 493
GK+LV+LAQ QD E+GDGTT VV++A LL +A+ L+ IHP I GY +A A+
Sbjct: 75 PAGKVLVELAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLAIREAV 134
Query: 494 THLDSVS*AFPVNKNTRENLIKVAMTTLGSKVV 592
+ V + V+ +E+LI VA T++ SK++
Sbjct: 135 KFMTDVL-SCSVDSLGKESLINVAKTSMSSKII 166
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 140 bits (340), Expect = 1e-34
Identities = 75/167 (44%), Positives = 108/167 (64%)
Frame = +2
Query: 122 QDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMM 301
QDR+K + S+I AAR +A +RTSLGP+G+DK++ + G+V +TNDGATILK +
Sbjct: 12 QDREKP---QEVRLSNIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHL 68
Query: 302 DVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKGIHPIRIADGYEMAA 481
V H K+LV L+ +QD E GDGTT VV+LAG++L A LL KGIHP IA+ ++ AA
Sbjct: 69 SVLHPAAKMLVDLSAAQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESFQRAA 128
Query: 482 ALALTHLDSVS*AFPVNKNTRENLIKVAMTTLGSKVVVKCHRLMAEI 622
+ + A + + RE+L++ A T+L SK+V + L+A I
Sbjct: 129 GFTVDCMKEN--ALAIELSDRESLLRAATTSLNSKIVSQYSNLLAPI 173
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 129 bits (312), Expect = 3e-31
Identities = 63/162 (38%), Positives = 103/162 (63%)
Frame = +2
Query: 137 RLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEHQ 316
R G A S+IQAA+ +A +RT LGPR + K+++ G V +TNDG IL+ ++V H
Sbjct: 14 RQVGHKAQMSNIQAAKAVADVIRTCLGPRAMLKMLLDPVGSVLLTNDGHAILREIEVAHP 73
Query: 317 IGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALT 496
K +++LA++QD+E+GDGTT V++LAG +L AS LLD+ IHP+ + ++ A AL+
Sbjct: 74 AAKSMIELARTQDEEVGDGTTSVIILAGEILAAASPLLDRKIHPVVMIRSFKQALEDALS 133
Query: 497 HLDSVS*AFPVNKNTRENLIKVAMTTLGSKVVVKCHRLMAEI 622
+D ++ PVN + + ++ T +G+K+V + LM +
Sbjct: 134 IIDEIT--LPVNVDDNAEMFRLIRTCIGTKLVARWSDLMCHL 173
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 124 bits (299), Expect = 1e-29
Identities = 65/166 (39%), Positives = 99/166 (59%), Gaps = 2/166 (1%)
Frame = +2
Query: 101 PFIILRDQDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDG 280
P I+L++ + G + S+I A + T+RT+LGP G DKLMV G+V ++NDG
Sbjct: 9 PVIVLKEGTDDSQ--GRGQLLSNINACVAVQDTIRTTLGPLGADKLMVDDRGEVVISNDG 66
Query: 281 ATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKGIHPIRIA 460
ATI+K++D+ H K LV +A++QD E+GDGTT VVV AG LL +A ++ G+ I
Sbjct: 67 ATIMKLLDIVHPAAKTLVDIARAQDAEVGDGTTSVVVFAGELLREARTFVEDGVSSHLII 126
Query: 461 DGYEMAAALALTHLDSVS*AFPVNK--NTRENLIKVAMTTLGSKVV 592
GY AA LA+ + ++ ++ R+ L K A T + SK++
Sbjct: 127 RGYRKAAQLAVNKIKEIAIHLDLSDEGKLRDLLTKCASTAMNSKLI 172
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 116 bits (278), Expect = 4e-27
Identities = 72/201 (35%), Positives = 111/201 (55%), Gaps = 2/201 (0%)
Frame = +2
Query: 101 PFIILRDQDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVS-SDGDVTVTND 277
P I + Q+R G +A S A + ++++LGP+G+DK++ S S GD+ VTND
Sbjct: 5 PHQIFNESGIQER--GENARLSSFVGAIAVGDLVKSTLGPKGMDKILQSNSSGDIVVTND 62
Query: 278 GATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKGIHPIRI 457
GATILK + +++ K+LV +++ QDDE+GDGTT V V A LL QA +++ IHP I
Sbjct: 63 GATILKSIALDNAAAKVLVNISKVQDDEVGDGTTSVCVFAAELLRQAEIMVNAKIHPQVI 122
Query: 458 ADGYEMAAALALTHLDSVS*AFPVN-KNTRENLIKVAMTTLGSKVVVKCHRLMAEIXXXX 634
DGY +A A+ L + S + R +L +A TTL SK++ + A++
Sbjct: 123 IDGYRIATKTAIDALRASSIDNSSDPAKFRSDLENIARTTLSSKILSQNKNHFAQLAVDA 182
Query: 635 XXXXXXXETRDVNFELIKVEG 697
D N ++IK+ G
Sbjct: 183 VLRLKGSTNLD-NIQIIKILG 202
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 107 bits (257), Expect = 2e-24
Identities = 55/147 (37%), Positives = 88/147 (59%), Gaps = 1/147 (0%)
Frame = +2
Query: 155 AIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEHQIGKLLV 334
A++ +I AA + L+++LGP G K++V G + +T DG +L M +++ +
Sbjct: 17 ALQVNISAAIGLQDVLKSNLGPTGTTKMLVDGAGAIKLTKDGKVLLTEMQIQNPTASCIA 76
Query: 335 QLAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALTHLDSVS 514
+ A +QDD GDGTT V +L G LL+QA + +G+HP I+DG+ +A ALT LDS
Sbjct: 77 KAATAQDDATGDGTTSVCLLVGELLKQAELYIREGLHPSLISDGFNLAKNEALTFLDSFK 136
Query: 515 *AFPVNKNTRENLIKVAMTT-LGSKVV 592
F V++ N+ K +++T + SKVV
Sbjct: 137 TDFEVDREVLLNVAKTSLSTKISSKVV 163
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 103 bits (246), Expect = 3e-23
Identities = 53/145 (36%), Positives = 83/145 (57%)
Frame = +2
Query: 152 DAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEHQIGKLL 331
DA+ + A R+++ RTSLGP G +K++V+ +TND ATI++ ++V H KL+
Sbjct: 26 DAVIRNCNAIRELSEITRTSLGPNGKNKIVVNHLQQTFLTNDAATIIRELEVIHPAAKLV 85
Query: 332 VQLAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALTHLDSV 511
V Q Q++E+GD VVV G LL +A N++ G+ P+ IA GYEMA + + L+ +
Sbjct: 86 VDATQQQENELGDAANFVVVFTGELLAKAENMIRMGLTPLEIAKGYEMALSHTMEVLEEI 145
Query: 512 S*AFPVNKNTRENLIKVAMTTLGSK 586
+ + LIK T + SK
Sbjct: 146 CADKIETVESEKELIKAIRTCISSK 170
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 55.6 bits (128), Expect = 7e-09
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 4/115 (3%)
Frame = +2
Query: 146 GTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATI---LKMMDVEHQ 316
G DA S + +A + +LGP+G + L+ G +T DG T+ + + D
Sbjct: 40 GVDARASLLTGVDTLARAVSVTLGPKGRNVLIDQPFGSPKITKDGVTVARSVSLKDKFEN 99
Query: 317 IGKLLVQLAQSQDDEI-GDGTTGVVVLAGALLEQASNLLDKGIHPIRIADGYEMA 478
+G LVQ S+ +E+ GDGTT VL A+ + + G +P+ + G ++A
Sbjct: 100 LGARLVQDVASKTNEVAGDGTTTATVLTRAIFSETVRNVAAGCNPMDLRRGIQLA 154
>SPBC947.05c |||ferric-chelate reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 564
Score = 29.5 bits (63), Expect = 0.50
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 321 VNYLCNWLRVKMTKLVMVPQGLLFLLVHSLSKPQICWTKVSI 446
+NYL WL V L+ V G+LF++ + S + + K+SI
Sbjct: 146 MNYLHRWLSVYAV-LISVLHGILFMIFSAQSYKPLLYDKISI 186
>SPBC30D10.03c |||IMP 5'-nucleotidase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 405
Score = 28.3 bits (60), Expect = 1.2
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +2
Query: 212 LGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEHQIGKLL 331
L GLD MVS DGDVT+ DG +L V ++ +LL
Sbjct: 136 LADNGLD--MVSFDGDVTLYEDGQPLLPDNPVISRLIQLL 173
>SPAC959.03c |||U3 snoRNP-associated protein
Utp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 520
Score = 26.2 bits (55), Expect = 4.7
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 205 AKSACNLSGCLYM*LYGIGTGKSFLSILIP 116
+ S +L C Y + GIG K F SI++P
Sbjct: 350 SSSVVDLHYCPYEDILGIGHAKGFESIIVP 379
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,988,320
Number of Sequences: 5004
Number of extensions: 61801
Number of successful extensions: 151
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 149
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 333194204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -