Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0124
(715 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) 252 3e-67
SB_8111| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) 111 4e-25
SB_22388| Best HMM Match : Extensin_2 (HMM E-Value=0.086) 77 1e-14
SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 4e-13
SB_25097| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 9e-13
SB_57454| Best HMM Match : DUF924 (HMM E-Value=1) 64 1e-10
SB_49248| Best HMM Match : Cpn60_TCP1 (HMM E-Value=1.6) 62 3e-10
SB_4934| Best HMM Match : NAD_binding_2 (HMM E-Value=4.8) 61 8e-10
SB_25096| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 4e-09
SB_56262| Best HMM Match : Cpn60_TCP1 (HMM E-Value=6.6e-15) 55 5e-08
SB_13166| Best HMM Match : Ank (HMM E-Value=2.9e-05) 32 0.40
SB_56787| Best HMM Match : Keratin_B2 (HMM E-Value=0.34) 30 1.6
SB_11519| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_21416| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
>SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)
Length = 505
Score = 252 bits (616), Expect = 3e-67
Identities = 121/180 (67%), Positives = 150/180 (83%)
Frame = +2
Query: 161 KSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEHQIGKLLVQL 340
+SHI AAR +AS L+TSLGP+G+DK+MVS DG+VTVTNDGATIL MM+V+HQI KL+V+L
Sbjct: 33 QSHILAARAVASILKTSLGPKGMDKMMVSPDGEVTVTNDGATILGMMEVDHQIAKLMVEL 92
Query: 341 AQSQDDEIGDGTTGVVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALTHLDSVS*A 520
++SQD+EIGDGTTGVVVLAGALLE A LLD GIHPIRIADGYE+AA +AL H+DS++
Sbjct: 93 SKSQDNEIGDGTTGVVVLAGALLEHAEQLLDWGIHPIRIADGYELAAKIALEHMDSIADN 152
Query: 521 FPVNKNTRENLIKVAMTTLGSKVVVKCHRLMAEIXXXXXXXXXXXETRDVNFELIKVEGK 700
FPV+K+ +E+LI+ AMTTLGSK+V +CHR +AEI E +DV+FELIKVEGK
Sbjct: 153 FPVDKDNKESLIQTAMTTLGSKIVSRCHRPLAEIAVDAVLSVADLERKDVDFELIKVEGK 212
>SB_8111| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)
Length = 531
Score = 111 bits (268), Expect = 4e-25
Identities = 62/170 (36%), Positives = 105/170 (61%), Gaps = 3/170 (1%)
Frame = +2
Query: 107 IILRDQDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVS--SDGDVTVTNDG 280
+ + +Q ++ T + S + A I ++++LGP+G+DK++ S +G++ VTNDG
Sbjct: 6 VSILNQGAEEERAETARLSSFVGAIA-IGDLVKSTLGPKGMDKILQSFGQNGNIQVTNDG 64
Query: 281 ATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKGIHPIRIA 460
ATILK + +++ K+LV+L++ QDDE+GDGTT V VL LL++A L+ IHP I
Sbjct: 65 ATILKSIGIDNPAAKILVELSKVQDDEVGDGTTSVTVLTSELLKEAEKLVSCKIHPQTIV 124
Query: 461 DGYEMAAALALTHLDSVS*AFPVN-KNTRENLIKVAMTTLGSKVVVKCHR 607
G+ + A L++ + + + RE+L+ +A TTL SK++V+ HR
Sbjct: 125 AGWRKSVKAAEKALEAAAVDHSSDPEKFREDLMNIARTTLSSKILVQ-HR 173
>SB_22388| Best HMM Match : Extensin_2 (HMM E-Value=0.086)
Length = 724
Score = 77.4 bits (182), Expect = 1e-14
Identities = 35/72 (48%), Positives = 50/72 (69%)
Frame = +2
Query: 146 GTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEHQIGK 325
G + S+I A + IA +RT+LGPRG+DKL+V G T++NDGATI+ ++D+ H K
Sbjct: 653 GIPQLISNIDACQFIADAVRTTLGPRGMDKLIVDGRGKATISNDGATIINLLDIVHPAAK 712
Query: 326 LLVQLAQSQDDE 361
LV +A+SQD E
Sbjct: 713 TLVDIAKSQDAE 724
>SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 762
Score = 72.1 bits (169), Expect = 4e-13
Identities = 40/120 (33%), Positives = 70/120 (58%)
Frame = +2
Query: 263 TVTNDGATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKGI 442
T+ G ++ ++H L+ ++A +QDD GDGTT V++ G LL+QA + +G+
Sbjct: 157 TMNPFGQNGVQNSQIQHPTASLIARVATAQDDITGDGTTSNVMIIGELLKQADLYVSEGL 216
Query: 443 HPIRIADGYEMAAALALTHLDSVS*AFPVNKNTRENLIKVAMTTLGSKVVVKCHRLMAEI 622
HP + +G+E+A AL L+ V + ++++T LI VA T+L +KV + L+ E+
Sbjct: 217 HPRLVTEGFEVAKKKALEVLEEVKVSREMDRDT---LINVAKTSLRTKVRTELADLLTEV 273
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 155 AIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDG 256
A+ +I AAR + L+T+LGP+G K++ G
Sbjct: 19 ALSLNITAARGLQDVLKTNLGPKGTMKILAVFTG 52
>SB_25097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 70.9 bits (166), Expect = 9e-13
Identities = 28/71 (39%), Positives = 49/71 (69%)
Frame = +2
Query: 266 VTNDGATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKGIH 445
+TNDG IL+ + V+H K +++++++QD+E+GDGTT V++LAG + A L++ +H
Sbjct: 1 MTNDGNAILREIQVKHPAAKSMIEISRTQDEEVGDGTTSVIILAGEFMSVAEPFLEQQMH 60
Query: 446 PIRIADGYEMA 478
P +I Y +A
Sbjct: 61 PTQIIAAYRLA 71
>SB_57454| Best HMM Match : DUF924 (HMM E-Value=1)
Length = 144
Score = 63.7 bits (148), Expect = 1e-10
Identities = 36/91 (39%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Frame = +2
Query: 338 LAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALTHLDSVS* 517
L++ QDDE+GDGTT V VLA LL++A L+ IHP I G+ + A L++ +
Sbjct: 2 LSKVQDDEVGDGTTSVTVLASELLKEAEKLVSCKIHPQTIVAGWRKSVKAAEKALEAAAV 61
Query: 518 AFPVN-KNTRENLIKVAMTTLGSKVVVKCHR 607
+ + R++L+ +A TTL SK++V+ HR
Sbjct: 62 DHSSDPEKFRDDLMNIARTTLSSKILVQ-HR 91
>SB_49248| Best HMM Match : Cpn60_TCP1 (HMM E-Value=1.6)
Length = 278
Score = 62.5 bits (145), Expect = 3e-10
Identities = 39/127 (30%), Positives = 67/127 (52%), Gaps = 5/127 (3%)
Frame = +2
Query: 95 GRPFIILRDQDRQKRLT-GTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVT 271
G F R Q+ K L G +A + +Q +A + +LGP+G + ++ S G +T
Sbjct: 47 GEGFSTSRFQNSPKELKFGAEARAAMLQGVDTLADAVAVTLGPKGKNVIIEQSFGGPKIT 106
Query: 272 NDGATILKMMDVE---HQIGKLLVQ-LAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKG 439
DG T+ K ++++ IG LVQ +A + ++E GDGTT VLA ++ + + KG
Sbjct: 107 KDGVTVAKAIELKDKYQNIGARLVQDVANNTNEEAGDGTTTATVLARSIATEGFLHVSKG 166
Query: 440 IHPIRIA 460
+P ++
Sbjct: 167 ANPQEVS 173
>SB_4934| Best HMM Match : NAD_binding_2 (HMM E-Value=4.8)
Length = 186
Score = 61.3 bits (142), Expect = 8e-10
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 3/85 (3%)
Frame = +2
Query: 164 SHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATI--LKMMDVE-HQIGKLLV 334
++I AA+ +A +RTSLGP+G+DK++ +GDVT+TNDGATI + +D+E +GK +V
Sbjct: 28 TNITAAKAVADAIRTSLGPKGMDKMIQGGNGDVTITNDGATIKLIDTVDLEGGPVGKPVV 87
Query: 335 QLAQSQDDEIGDGTTGVVVLAGALL 409
A G+ LA +L
Sbjct: 88 PAALMNRPTRGERRFAYWALAECIL 112
>SB_25096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 315
Score = 58.8 bits (136), Expect = 4e-09
Identities = 22/60 (36%), Positives = 41/60 (68%)
Frame = +2
Query: 299 MDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKGIHPIRIADGYEMA 478
+ V+H K +++++++QD+E+GDGTT V++LAG + A L++ +HP +I Y +A
Sbjct: 209 IQVKHPAAKSMIEISRTQDEEVGDGTTSVIILAGEFMSVAEPFLEQQMHPTQIIAAYRLA 268
>SB_56262| Best HMM Match : Cpn60_TCP1 (HMM E-Value=6.6e-15)
Length = 563
Score = 55.2 bits (127), Expect = 5e-08
Identities = 22/86 (25%), Positives = 48/86 (55%)
Frame = +2
Query: 170 IQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEHQIGKLLVQLAQS 349
+Q + L+ S GP GLD ++ SS G++ +TN G+ IL+ + + + +++V+ A+S
Sbjct: 6 LQTCQNFERILKKSFGPNGLDVMLRSSSGNILITNSGSMILESLTMGNPTERMIVEAARS 65
Query: 350 QDDEIGDGTTGVVVLAGALLEQASNL 427
G G + +++ + + +N+
Sbjct: 66 LSGRTGSGASYFIIILAEIFREIANI 91
>SB_13166| Best HMM Match : Ank (HMM E-Value=2.9e-05)
Length = 299
Score = 32.3 bits (70), Expect = 0.40
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +2
Query: 386 VVLAGALLEQASNLLDKGIHP--IRIADG-YEMAAALALTHLDSVS*AFPVNKNTRENLI 556
+ +AGAL+ + N+ G+ P +++ DG AAL+L H+D + AF + N R L
Sbjct: 83 IEMAGALMFVSGNI---GLWPASMKLVDGGVSTQAALSLRHVDRIVSAFSAHGNLRNTLS 139
Query: 557 KVAMTTLGSKVVV 595
V T + V
Sbjct: 140 GVCYLTCAQHIPV 152
>SB_56787| Best HMM Match : Keratin_B2 (HMM E-Value=0.34)
Length = 527
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -1
Query: 649 CHSQDSINSYFCHQPVTLDH-HFTAQGCHGHL 557
CH+ ++ + H PVT H H T CH H+
Sbjct: 445 CHNHITVTTCHDHIPVTTCHYHITVTTCHNHI 476
>SB_11519| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3
Query: 303 TLSIRLVNYLCNWLRVKMTKLVMVPQGLLFL 395
TL + +V +LC W + + L+ +G+LFL
Sbjct: 241 TLFVTVVGFLCCWTPILIMDLIEFARGILFL 271
>SB_21416| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 273 FVTVTSPSDDTISLSRPRGPRDVRRVLAI 187
F T+++PS TIS P+D RRV AI
Sbjct: 121 FSTISNPSKTTISRVNISTPQDFRRVSAI 149
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,232,538
Number of Sequences: 59808
Number of extensions: 505516
Number of successful extensions: 1228
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1219
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1889780269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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