Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0120
         (557 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2150|AAF48455.1| 2030|Drosophila melanogaster CG9198-PA...    29   4.3  
AL031583-10|CAA20900.1|  504|Drosophila melanogaster EG:34F3.1 p...    29   5.6  
AE014298-113|AAF45555.2| 1561|Drosophila melanogaster CG12467-PA...    29   5.6  

>AE014298-2150|AAF48455.1| 2030|Drosophila melanogaster CG9198-PA,
           isoform A protein.
          Length = 2030

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -3

Query: 366 ACPGVLGVDLGSTWFSEIPDYTGCFPPEKS 277
           ACP VL    GST +   P+YT  F  E+S
Sbjct: 263 ACPVVLKTATGSTGYMTEPEYTVVFTTEES 292


>AL031583-10|CAA20900.1|  504|Drosophila melanogaster EG:34F3.1
           protein.
          Length = 504

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -1

Query: 275 GYSPEGRARRDDYLDPKKXXXXXXXXXXXSQKHTKNLVFEPQ 150
           G +PE R RR + LDP++             +H +NL  EPQ
Sbjct: 163 GSNPEHR-RRSESLDPQEIIGRPLTSSYPHHQHRRNLSMEPQ 203


>AE014298-113|AAF45555.2| 1561|Drosophila melanogaster CG12467-PA
           protein.
          Length = 1561

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -1

Query: 275 GYSPEGRARRDDYLDPKKXXXXXXXXXXXSQKHTKNLVFEPQ 150
           G +PE R RR + LDP++             +H +NL  EPQ
Sbjct: 202 GSNPEHR-RRSESLDPQEIIGRPLTSSYPHHQHRRNLSMEPQ 242


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,754,041
Number of Sequences: 53049
Number of extensions: 554383
Number of successful extensions: 1466
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1466
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2151905496
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)