Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0119
(643 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_27310| Best HMM Match : CUB (HMM E-Value=9.7e-17) 33 0.26
SB_17327| Best HMM Match : DUF1161 (HMM E-Value=3) 33 0.26
SB_23915| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.46
SB_12450| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.60
SB_47975| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_1653| Best HMM Match : ABC_tran (HMM E-Value=0) 29 4.2
SB_46967| Best HMM Match : 7tm_1 (HMM E-Value=4.1e-19) 28 5.6
SB_18393| Best HMM Match : RCSD (HMM E-Value=2.6) 28 5.6
SB_58267| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=1.5) 28 7.4
SB_56113| Best HMM Match : zf-CCHC (HMM E-Value=0.0026) 28 7.4
SB_35972| Best HMM Match : DUF1379 (HMM E-Value=5.5) 28 7.4
SB_24087| Best HMM Match : rve (HMM E-Value=2.2e-17) 28 7.4
SB_12746| Best HMM Match : DUF1379 (HMM E-Value=5.5) 28 7.4
SB_10735| Best HMM Match : rve (HMM E-Value=2.2e-17) 28 7.4
SB_54171| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_48899| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_36000| Best HMM Match : DUF1379 (HMM E-Value=4.8) 28 7.4
SB_35867| Best HMM Match : Fibrinogen_C (HMM E-Value=6.5e-13) 28 7.4
SB_32624| Best HMM Match : rve (HMM E-Value=0.00042) 28 7.4
SB_27713| Best HMM Match : CKS (HMM E-Value=2.4) 28 7.4
SB_24442| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_23421| Best HMM Match : rve (HMM E-Value=1.8e-18) 28 7.4
SB_21695| Best HMM Match : RVT_1 (HMM E-Value=0.00068) 28 7.4
SB_21709| Best HMM Match : F5_F8_type_C (HMM E-Value=8.7e-21) 27 9.8
SB_32458| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
>SB_27310| Best HMM Match : CUB (HMM E-Value=9.7e-17)
Length = 761
Score = 32.7 bits (71), Expect = 0.26
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Frame = -2
Query: 486 IKTSHFHIRIVLSVISFVIVRAIFIVIP--HTLINKLWFHFGS-DSIVLIFVWYRHKFV- 319
+ S F + +++ V+ V+V + + T +N L + + D + L+FV ++ F+
Sbjct: 598 VLASVFAVLVLIGVVGNVLVCLVILRFSSMRTPMNYLLLNLAAADLLTLLFVSPQYVFIH 657
Query: 318 -FCRTRGTCFQWIYAFSFR 265
F G CF + +AF+FR
Sbjct: 658 TFVHPIGECFSFFFAFAFR 676
>SB_17327| Best HMM Match : DUF1161 (HMM E-Value=3)
Length = 345
Score = 32.7 bits (71), Expect = 0.26
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 3/99 (3%)
Frame = -2
Query: 567 AKSPPNLCIADCSTFTSRNINISSCRAIKTSHFHIR-IVLSVISFVIVRAIFIVIPHTLI 391
A S P + I D +T + I ++ I T I +++S + I I +T
Sbjct: 138 AFSIPIVVIRDRNTMQALLITVAVISVITTGAQAINPCEQTIVSKCVTSYISEFIGNTST 197
Query: 390 NKLWFHFGSDSIVLIFVWYRHKFVFCRTRG--TCFQWIY 280
NKL H +D VL ++ K CR +G T FQ +Y
Sbjct: 198 NKLDVHCTADKAVLSYIVMDRKLNVCRWQGYWTLFQLLY 236
>SB_23915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 31.9 bits (69), Expect = 0.46
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = -2
Query: 558 PPNLCIADCSTFTSRNINISSCRAIKT---SHFHIRIVLSVISFVIVRAIFIVIPHTLIN 388
P + S T +++ R I T HF R VL V+ FV V +I IV+P+ L+
Sbjct: 99 PLQTILMSVSVMTLLGMSMERYRLIVTPFRQHFGPRTVLGVVVFVWVLSIAIVLPYMLVL 158
Query: 387 KL 382
+L
Sbjct: 159 RL 160
>SB_12450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 31.5 bits (68), Expect = 0.60
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = -2
Query: 579 VTSFAKSPPNLCIADCSTFTSRNINISSCRAIKTS-HFHIRIVLS-VISFVI 430
+ S + P LC+ STFT +I+I C A++ + I + V+SF++
Sbjct: 53 IFSSVRRPLGLCLCAVSTFTITSISIDRCLAVRLKMDYPITVTFKRVVSFIV 104
>SB_47975| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 53
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +2
Query: 284 IHWKQVPLVLQKTNL*RYQTK 346
+H++ +P V+QKTNL RY K
Sbjct: 24 VHFRSMPRVVQKTNLTRYNLK 44
>SB_1653| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1702
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = -2
Query: 582 FVTSFAKSPPNLCIADCSTFTSRNINISSCRAIKTSHFHIRIVLSVISFV 433
F + + P LC+ C FT R ++ + + H+R+V + IS +
Sbjct: 675 FEAFYCSTIPTLCVMLCYIFTDRRLDQAVIFTVFAYFSHLRMVANYISAI 724
>SB_46967| Best HMM Match : 7tm_1 (HMM E-Value=4.1e-19)
Length = 341
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = -2
Query: 513 NINISSCRAIKTSHFHIRIVLSVISFVIVRAIFIVIPHTLINKLWFHFGSDSIVLIFVW 337
NI+ C A+ + I + V+ +I+I H + KLW SIVL VW
Sbjct: 96 NIHHKVCLAMDITSRFIAYSTVLHLLVVTLERYIMIVHAMKYKLWITKKRTSIVLTSVW 154
>SB_18393| Best HMM Match : RCSD (HMM E-Value=2.6)
Length = 249
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 224 Q*HQITLLPHKVDQRNENA*IHWKQVPLVLQKTNL*RYQTKMR 352
Q H+I+L HK R + + PL KT L +Y+T +R
Sbjct: 103 QQHKISLQQHKTRLRQHKTPLRQHKTPLRQHKTPLRQYKTPLR 145
>SB_58267| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=1.5)
Length = 722
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -2
Query: 465 IRIVLSVISFVIVRAIFIVIPHTLINKLWFHFG 367
I V+ +I I+ I I+I +IN+L+ H G
Sbjct: 684 IVFVIIIIIITIITTIIIIITIAIINRLYHHHG 716
>SB_56113| Best HMM Match : zf-CCHC (HMM E-Value=0.0026)
Length = 1163
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 265 AKRKCVDPLEAGPSGSAKDEFVTIPDE 345
A+ K D + P+GS E +T+PD+
Sbjct: 745 ARHKAADAISRHPTGSTTPEMMTLPDD 771
>SB_35972| Best HMM Match : DUF1379 (HMM E-Value=5.5)
Length = 325
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 265 AKRKCVDPLEAGPSGSAKDEFVTIPDE 345
A+ K D + P+GS E +T+PD+
Sbjct: 234 ARHKAADAISRHPTGSTTPEMMTLPDD 260
>SB_24087| Best HMM Match : rve (HMM E-Value=2.2e-17)
Length = 1229
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 265 AKRKCVDPLEAGPSGSAKDEFVTIPDE 345
A+ K D + P+GS E +T+PD+
Sbjct: 679 ARHKAADAISRHPTGSTTPEMMTLPDD 705
>SB_12746| Best HMM Match : DUF1379 (HMM E-Value=5.5)
Length = 398
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 265 AKRKCVDPLEAGPSGSAKDEFVTIPDE 345
A+ K D + P+GS E +T+PD+
Sbjct: 172 ARHKAADAISRHPTGSTTPEMMTLPDD 198
>SB_10735| Best HMM Match : rve (HMM E-Value=2.2e-17)
Length = 1013
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 265 AKRKCVDPLEAGPSGSAKDEFVTIPDE 345
A+ K D + P+GS E +T+PD+
Sbjct: 93 ARHKAADAISRHPTGSTTPEMMTLPDD 119
>SB_54171| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 265 AKRKCVDPLEAGPSGSAKDEFVTIPDE 345
A+ K D + P+GS E +T+PD+
Sbjct: 51 ARHKAADAISRHPTGSTTPEMMTLPDD 77
>SB_48899| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 265 AKRKCVDPLEAGPSGSAKDEFVTIPDE 345
A+ K D + P+GS E +T+PD+
Sbjct: 209 ARHKAADAISRHPTGSTTPEMMTLPDD 235
>SB_36000| Best HMM Match : DUF1379 (HMM E-Value=4.8)
Length = 420
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 265 AKRKCVDPLEAGPSGSAKDEFVTIPDE 345
A+ K D + P+GS E +T+PD+
Sbjct: 272 ARHKAADAISRHPTGSTTPEMMTLPDD 298
>SB_35867| Best HMM Match : Fibrinogen_C (HMM E-Value=6.5e-13)
Length = 445
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -3
Query: 191 VEEGLESRSVSNLVITDCLCCDDLGPGLEVGFGLDGV 81
+ EG+ SR S IT CD L + FGLDG+
Sbjct: 85 IREGIFSRLESMEWITCTQMCDQLDDCVSYNFGLDGM 121
>SB_32624| Best HMM Match : rve (HMM E-Value=0.00042)
Length = 415
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 265 AKRKCVDPLEAGPSGSAKDEFVTIPDE 345
A+ K D + P+GS E +T+PD+
Sbjct: 93 ARHKAADAISRHPTGSTTPEMMTLPDD 119
>SB_27713| Best HMM Match : CKS (HMM E-Value=2.4)
Length = 86
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 173 SRSVSNLVITDCLCCDDLGPGLEVGFGLDGV 81
SR + L++ LCCDD+ +E G GL V
Sbjct: 21 SRPLLLLLLLARLCCDDMSERIERGIGLRDV 51
>SB_24442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 673
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 508 NISGGEGGAVGDAQVRWALSKRGN 579
NI+GG V A +WALS+ GN
Sbjct: 37 NITGGADEFVNPADRKWALSRAGN 60
>SB_23421| Best HMM Match : rve (HMM E-Value=1.8e-18)
Length = 838
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 265 AKRKCVDPLEAGPSGSAKDEFVTIPDE 345
A+ K D + P+GS E +T+PD+
Sbjct: 286 ARHKAADAISRHPTGSTTPEMMTLPDD 312
>SB_21695| Best HMM Match : RVT_1 (HMM E-Value=0.00068)
Length = 1502
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 265 AKRKCVDPLEAGPSGSAKDEFVTIPDE 345
A+ K D + P+GS E +T+PD+
Sbjct: 999 ARHKAADAISRHPTGSTTPEMMTLPDD 1025
>SB_21709| Best HMM Match : F5_F8_type_C (HMM E-Value=8.7e-21)
Length = 532
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/56 (30%), Positives = 32/56 (57%)
Frame = +2
Query: 383 SLLMRVCGMTMKMARTMTKLITERTILIWK*LVLMALQLEMLIFLEVKVEQSAMHK 550
+++M + MTM M TMT +T T+ + +++M + ++ +FL VK + HK
Sbjct: 297 TMVMMLMMMTMTMTMTMTMTMT-MTMTMMMIMMMMVVAVDHTMFL-VKTTRLRRHK 350
>SB_32458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +1
Query: 445 YGEDDSNMEMTGFDGSATGDVNISG-GEGGAVGD 543
YG D N++ G DG GD + G G+G GD
Sbjct: 114 YGGDGDNIDDDGDDGGGDGDGDGDGDGDGDGDGD 147
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.309 0.128 0.361
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,687,349
Number of Sequences: 59808
Number of extensions: 300286
Number of successful extensions: 798
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 797
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1620947750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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