Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0119
         (643 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y10931-1|CAA71861.1| 1142|Homo sapiens symplekin protein.              33   1.1  
U49240-1|AAC50667.1| 1142|Homo sapiens symplekin protein.              33   1.1  
BC006567-1|AAH06567.1| 1142|Homo sapiens SYMPK protein protein.        33   1.1  
BC006536-1|AAH06536.1| 1142|Homo sapiens SYMPK protein protein.        33   1.1  
AK091467-1|BAC03669.1|  619|Homo sapiens protein ( Homo sapiens ...    30   8.0  
AK055949-1|BAB71053.1|  352|Homo sapiens protein ( Homo sapiens ...    30   8.0  
AB067504-1|BAB67810.2|  702|Homo sapiens KIAA1917 protein protein.     30   8.0  

>Y10931-1|CAA71861.1| 1142|Homo sapiens symplekin protein.
          Length = 1142

 Score = 32.7 bits (71), Expect = 1.1
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = -3

Query: 344  SSGIVTNSSFAEPEGPASSGSTHFRFAGPLCEEEELFDAIDGLFGLLTATGVEEGLE 174
            SS   + S  A P  P S  +  FR  GP CE   +F ++D   GL  A  ++  LE
Sbjct: 1036 SSSSPSPSPSARPGPPPSEEAMDFREEGPECETPGIFISMDDDSGLTEAALLDSSLE 1092


>U49240-1|AAC50667.1| 1142|Homo sapiens symplekin protein.
          Length = 1142

 Score = 32.7 bits (71), Expect = 1.1
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = -3

Query: 344  SSGIVTNSSFAEPEGPASSGSTHFRFAGPLCEEEELFDAIDGLFGLLTATGVEEGLE 174
            SS   + S  A P  P S  +  FR  GP CE   +F ++D   GL  A  ++  LE
Sbjct: 1036 SSSSPSPSPSARPGPPPSEEAMDFREEGPECETPGIFISMDDDSGLTEAALLDSSLE 1092


>BC006567-1|AAH06567.1| 1142|Homo sapiens SYMPK protein protein.
          Length = 1142

 Score = 32.7 bits (71), Expect = 1.1
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = -3

Query: 344  SSGIVTNSSFAEPEGPASSGSTHFRFAGPLCEEEELFDAIDGLFGLLTATGVEEGLE 174
            SS   + S  A P  P S  +  FR  GP CE   +F ++D   GL  A  ++  LE
Sbjct: 1036 SSSSPSPSPSARPGPPPSEEAMDFREEGPECETPGIFISMDDDSGLTEAALLDSSLE 1092


>BC006536-1|AAH06536.1| 1142|Homo sapiens SYMPK protein protein.
          Length = 1142

 Score = 32.7 bits (71), Expect = 1.1
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = -3

Query: 344  SSGIVTNSSFAEPEGPASSGSTHFRFAGPLCEEEELFDAIDGLFGLLTATGVEEGLE 174
            SS   + S  A P  P S  +  FR  GP CE   +F ++D   GL  A  ++  LE
Sbjct: 1036 SSSSPSPSPSARPGPPPSEEAMDFREEGPECETPGIFISMDDDSGLTEAALLDSSLE 1092


>AK091467-1|BAC03669.1|  619|Homo sapiens protein ( Homo sapiens
           cDNA FLJ34148 fis, clone FCBBF3012546. ).
          Length = 619

 Score = 29.9 bits (64), Expect = 8.0
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = -3

Query: 350 SSSSGIVTNSSFAEPEGPASSGSTHFRFAGPLCEEEELFDAIDGLFGLLTATGVEEGLES 171
           SS +G   +S+ + PEGPASS       +  +   +   D +  + G   A G EE  E+
Sbjct: 455 SSCTGTPLSSTISSPEGPASSSLAQSVMS--MASSQISTDTVSSMSGSYIAPGTEEEGEA 512

Query: 170 RS 165
            S
Sbjct: 513 LS 514


>AK055949-1|BAB71053.1|  352|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31387 fis, clone NT2NE1000018, weakly similar to
           SUPPRESSOR PROTEIN SRP40. ).
          Length = 352

 Score = 29.9 bits (64), Expect = 8.0
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = -3

Query: 350 SSSSGIVTNSSFAEPEGPASSGSTHFRFAGPLCEEEELFDAIDGLFGLLTATGVEEGLES 171
           SS +G   +S+ + PEGPASS       +  +   +   D +  + G   A G EE  E+
Sbjct: 166 SSCTGTPLSSTISSPEGPASSSLAQSVMS--MASSQISTDTVSSMSGSYIAPGTEEEGEA 223

Query: 170 RS 165
            S
Sbjct: 224 LS 225


>AB067504-1|BAB67810.2|  702|Homo sapiens KIAA1917 protein protein.
          Length = 702

 Score = 29.9 bits (64), Expect = 8.0
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = -3

Query: 350 SSSSGIVTNSSFAEPEGPASSGSTHFRFAGPLCEEEELFDAIDGLFGLLTATGVEEGLES 171
           SS +G   +S+ + PEGPASS       +  +   +   D +  + G   A G EE  E+
Sbjct: 516 SSCTGTPLSSTISSPEGPASSSLAQSVMS--MASSQISTDTVSSMSGSYIAPGTEEEGEA 573

Query: 170 RS 165
            S
Sbjct: 574 LS 575


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.309    0.128    0.361 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,716,063
Number of Sequences: 237096
Number of extensions: 1450638
Number of successful extensions: 6481
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6481
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)