Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0117
(521 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g56030.1 68418.m06991 heat shock protein 81-2 (HSP81-2) nearl... 132 2e-31
At3g07770.1 68416.m00947 heat shock protein-related strong simil... 130 4e-31
At5g56000.1 68418.m06988 heat shock protein 81-4 (HSP81-4) nearl... 130 7e-31
At5g56010.1 68418.m06989 heat shock protein, putative strong sim... 129 1e-30
At4g24190.2 68417.m03473 shepherd protein (SHD) / clavata format... 128 2e-30
At4g24190.1 68417.m03472 shepherd protein (SHD) / clavata format... 128 2e-30
At5g52640.1 68418.m06535 heat shock protein 81-1 (HSP81-1) / hea... 124 5e-29
At2g04030.2 68415.m00372 heat shock protein, putative strong sim... 115 2e-26
At2g04030.1 68415.m00371 heat shock protein, putative strong sim... 115 2e-26
At4g32350.1 68417.m04605 expressed protein contains Pfam profile... 31 0.36
At1g67230.1 68414.m07652 expressed protein 28 4.4
At4g02460.1 68417.m00333 DNA mismatch repair protein, putative s... 27 5.8
At5g65910.1 68418.m08296 BSD domain-containing protein contains ... 27 7.7
>At5g56030.1 68418.m06991 heat shock protein 81-2 (HSP81-2) nearly
identical to SP|P55737 Heat shock protein 81-2 (HSP81-2)
{Arabidopsis thaliana}
Length = 699
Score = 132 bits (318), Expect = 2e-31
Identities = 70/174 (40%), Positives = 93/174 (53%), Gaps = 6/174 (3%)
Frame = +1
Query: 10 EKSAAPEMNDMIGQFGVGFYSAFLVADSVTVASKHNDDRQHVWQSDA-NSFSVAEDPRGD 186
E AA MIGQFGVGFYSA+LVAD V V +KHNDD Q+VW+S A SF+V D G+
Sbjct: 107 EALAAGADVSMIGQFGVGFYSAYLVADKVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGE 166
Query: 187 TLKRGTHLTLHMKEEASDYLQADTIRALVKKYSQFINFPIYLW-----ASXXXXXXXXXX 351
TL RGT + L++KE+ +YL+ ++ LVKK+S+FI++PI LW
Sbjct: 167 TLGRGTKMVLYLKEDQLEYLEERRLKDLVKKHSEFISYPISLWIEKTIEKEISDDEEEEE 226
Query: 352 XXXXXXXXXXXXXXXXXXXXXXXXXXXXVWDWELMNDNKPIWTRKPSEVQDDEY 513
+W+L+N KPIW RKP E+ +EY
Sbjct: 227 KKDEEGKVEEVDEEKEKEEKKKKKIKEVSHEWDLVNKQKPIWMRKPEEINKEEY 280
>At3g07770.1 68416.m00947 heat shock protein-related strong
similarity to heat-shock protein [Secale cereale]
GI:556673; contains Pfam profiles PF02518: ATPase,
histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein, PF00183: Hsp90 protein
Length = 803
Score = 130 bits (315), Expect = 4e-31
Identities = 68/166 (40%), Positives = 91/166 (54%), Gaps = 4/166 (2%)
Frame = +1
Query: 34 NDMIGQFGVGFYSAFLVADSVTVASKH-NDDRQHVWQSDANS--FSVAEDPRGDTL-KRG 201
N++IGQFGVGFYSAFLVAD V V++K D+Q+VW+ +ANS F++ ED +L RG
Sbjct: 209 NNLIGQFGVGFYSAFLVADRVIVSTKSPKSDKQYVWEGEANSSSFTIQEDTDPQSLIPRG 268
Query: 202 THLTLHMKEEASDYLQADTIRALVKKYSQFINFPIYLWASXXXXXXXXXXXXXXXXXXXX 381
T +TLH+K+EA ++ + I+ LVK YSQF++FPIY W
Sbjct: 269 TRITLHLKQEAKNFADPERIQKLVKNYSQFVSFPIYTW-QEKGYTKEVEVEDDPTETKKD 327
Query: 382 XXXXXXXXXXXXXXXXXXVWDWELMNDNKPIWTRKPSEVQDDEYTQ 519
WDWEL N+ +PIW R P EV EY +
Sbjct: 328 DQDDQTEKKKKTKKVVERYWDWELTNETQPIWLRNPKEVTTAEYNE 373
>At5g56000.1 68418.m06988 heat shock protein 81-4 (HSP81-4) nearly
identical to heat shock protein hsp81.4 [Arabidopsis
thaliana] GI:1906828; contains Pfam profiles PF02518:
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like
domain protein, PF00183: Hsp90 protein
Length = 699
Score = 130 bits (313), Expect = 7e-31
Identities = 68/174 (39%), Positives = 92/174 (52%), Gaps = 6/174 (3%)
Frame = +1
Query: 10 EKSAAPEMNDMIGQFGVGFYSAFLVADSVTVASKHNDDRQHVWQSDA-NSFSVAEDPRGD 186
E AA MIGQFGVGFYSA+LVAD V V +KHNDD Q+VW+S A SF+V D G+
Sbjct: 107 EALAAGADVSMIGQFGVGFYSAYLVADKVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGE 166
Query: 187 TLKRGTHLTLHMKEEASDYLQADTIRALVKKYSQFINFPIYLW-----ASXXXXXXXXXX 351
L RGT + L++KE+ +Y++ ++ LVKK+S+FI++PI LW
Sbjct: 167 ALGRGTKMILYLKEDQMEYIEERRLKDLVKKHSEFISYPISLWIEKTIEKEISDDEEEEE 226
Query: 352 XXXXXXXXXXXXXXXXXXXXXXXXXXXXVWDWELMNDNKPIWTRKPSEVQDDEY 513
+W+L+N KPIW RKP E+ +EY
Sbjct: 227 KKDEEGKVEEIDEEKEKEEKKKKKIKEVTHEWDLVNKQKPIWMRKPEEINKEEY 280
>At5g56010.1 68418.m06989 heat shock protein, putative strong
similarity to SP|P55737 Heat shock protein 81-2
(HSP81-2) {Arabidopsis thaliana}; contains Pfam profiles
PF02518: ATPase, histidine kinase-, DNA gyrase B-, and
HSP90-like domain protein, PF00183: Hsp90 protein
Length = 699
Score = 129 bits (312), Expect = 1e-30
Identities = 68/174 (39%), Positives = 92/174 (52%), Gaps = 6/174 (3%)
Frame = +1
Query: 10 EKSAAPEMNDMIGQFGVGFYSAFLVADSVTVASKHNDDRQHVWQSDA-NSFSVAEDPRGD 186
E AA MIGQFGVGFYSA+LVAD V V +KHNDD Q+VW+S A SF+V D G+
Sbjct: 107 EALAAGADVSMIGQFGVGFYSAYLVADKVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGE 166
Query: 187 TLKRGTHLTLHMKEEASDYLQADTIRALVKKYSQFINFPIYLW-----ASXXXXXXXXXX 351
L RGT + L++KE+ +Y++ ++ LVKK+S+FI++PI LW
Sbjct: 167 ALGRGTKMVLYLKEDQMEYIEERRLKDLVKKHSEFISYPISLWIEKTIEKEISDDEEEEE 226
Query: 352 XXXXXXXXXXXXXXXXXXXXXXXXXXXXVWDWELMNDNKPIWTRKPSEVQDDEY 513
+W+L+N KPIW RKP E+ +EY
Sbjct: 227 KKDEEGKVEEVDEEKEKEEKKKKKIKEVSHEWDLVNKQKPIWMRKPEEINKEEY 280
>At4g24190.2 68417.m03473 shepherd protein (SHD) / clavata formation
protein, putative nearly identical to SHEPHERD
[Arabidopsis thaliana] GI:19570872; contains Pfam
profiles PF02518: ATPase, histidine kinase-, DNA gyrase
B-, and HSP90-like domain protein, PF00183: Hsp90
protein
Length = 823
Score = 128 bits (309), Expect = 2e-30
Identities = 57/96 (59%), Positives = 76/96 (79%), Gaps = 1/96 (1%)
Frame = +1
Query: 37 DMIGQFGVGFYSAFLVADSVTVASKHNDDRQHVWQSDANS-FSVAEDPRGDTLKRGTHLT 213
++IGQFGVGFYSA+LVAD + V SKHNDD Q+VW+S AN F+V+ED + L RGT +
Sbjct: 190 NLIGQFGVGFYSAYLVADYIEVISKHNDDSQYVWESKANGKFAVSEDTWNEPLGRGTEIR 249
Query: 214 LHMKEEASDYLQADTIRALVKKYSQFINFPIYLWAS 321
LH+++EA +YL+ ++ LVK+YS+FINFPI LWAS
Sbjct: 250 LHLRDEAGEYLEESKLKELVKRYSEFINFPISLWAS 285
Score = 44.0 bits (99), Expect = 6e-05
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = +1
Query: 436 VWDWELMNDNKPIWTRKPSEVQDDEYTQ 519
V++WEL+ND K IW R P EV ++EYT+
Sbjct: 335 VYEWELLNDVKAIWLRSPKEVTEEEYTK 362
>At4g24190.1 68417.m03472 shepherd protein (SHD) / clavata formation
protein, putative nearly identical to SHEPHERD
[Arabidopsis thaliana] GI:19570872; contains Pfam
profiles PF02518: ATPase, histidine kinase-, DNA gyrase
B-, and HSP90-like domain protein, PF00183: Hsp90
protein
Length = 823
Score = 128 bits (309), Expect = 2e-30
Identities = 57/96 (59%), Positives = 76/96 (79%), Gaps = 1/96 (1%)
Frame = +1
Query: 37 DMIGQFGVGFYSAFLVADSVTVASKHNDDRQHVWQSDANS-FSVAEDPRGDTLKRGTHLT 213
++IGQFGVGFYSA+LVAD + V SKHNDD Q+VW+S AN F+V+ED + L RGT +
Sbjct: 190 NLIGQFGVGFYSAYLVADYIEVISKHNDDSQYVWESKANGKFAVSEDTWNEPLGRGTEIR 249
Query: 214 LHMKEEASDYLQADTIRALVKKYSQFINFPIYLWAS 321
LH+++EA +YL+ ++ LVK+YS+FINFPI LWAS
Sbjct: 250 LHLRDEAGEYLEESKLKELVKRYSEFINFPISLWAS 285
Score = 44.0 bits (99), Expect = 6e-05
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = +1
Query: 436 VWDWELMNDNKPIWTRKPSEVQDDEYTQ 519
V++WEL+ND K IW R P EV ++EYT+
Sbjct: 335 VYEWELLNDVKAIWLRSPKEVTEEEYTK 362
>At5g52640.1 68418.m06535 heat shock protein 81-1 (HSP81-1) / heat
shock protein 83 (HSP83) nearly identical to SP|P27323
Heat shock protein 81-1 (HSP81-1) (Heat shock protein
83) {Arabidopsis thaliana}; contains Pfam profiles
PF02518: ATPase, histidine kinase-, DNA gyrase B-, and
HSP90-like domain protein, PF00183: Hsp90 protein
Length = 705
Score = 124 bits (298), Expect = 5e-29
Identities = 67/167 (40%), Positives = 90/167 (53%), Gaps = 9/167 (5%)
Frame = +1
Query: 40 MIGQFGVGFYSAFLVADSVTVASKHNDDRQHVWQSDA-NSFSVAEDPRGDTLKRGTHLTL 216
MIGQFGVGFYSA+LVA+ V V +KHNDD Q+VW+S A SF+V D G+ L RGT +TL
Sbjct: 122 MIGQFGVGFYSAYLVAEKVVVTTKHNDDEQYVWESQAGGSFTVTRDVDGEPLGRGTKITL 181
Query: 217 HMKEEASDYLQADTIRALVKKYSQFINFPIYLWA--------SXXXXXXXXXXXXXXXXX 372
+K++ +YL+ ++ LVKK+S+FI++PIYLW S
Sbjct: 182 FLKDDQLEYLEERRLKDLVKKHSEFISYPIYLWTEKTTEKEISDDEDEDEPKKENEGEVE 241
Query: 373 XXXXXXXXXXXXXXXXXXXXXVWDWELMNDNKPIWTRKPSEVQDDEY 513
W+ L+N KPIW RKP E+ +EY
Sbjct: 242 EVDEEKEKDGKKKKKIKEVSHEWE--LINKQKPIWLRKPEEITKEEY 286
>At2g04030.2 68415.m00372 heat shock protein, putative strong
similarity to heat shock protein [Arabidopsis thaliana]
GI:1906830; contains Pfam profiles PF02518: ATPase,
histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein, PF00183: Hsp90 protein
Length = 777
Score = 115 bits (276), Expect = 2e-26
Identities = 62/167 (37%), Positives = 90/167 (53%), Gaps = 5/167 (2%)
Frame = +1
Query: 34 NDMIGQFGVGFYSAFLVADSVTVASKH-NDDRQHVWQS--DANSFSVAEDPRGDT-LKRG 201
N +IGQFGVGFYSAFLVA+ V V++K D+Q+VW+S D++S+ + E+ D L+RG
Sbjct: 191 NGLIGQFGVGFYSAFLVAEKVVVSTKSPKSDKQYVWESVADSSSYLIREETDPDNILRRG 250
Query: 202 THLTLHMKEEAS-DYLQADTIRALVKKYSQFINFPIYLWASXXXXXXXXXXXXXXXXXXX 378
T +TL+++E+ ++ ++ I+ LVK YSQF+ FPIY W
Sbjct: 251 TQITLYLREDDKYEFAESTRIKNLVKNYSQFVGFPIYTWQE-------KSRTIEVEEDEP 303
Query: 379 XXXXXXXXXXXXXXXXXXXVWDWELMNDNKPIWTRKPSEVQDDEYTQ 519
WDWEL N+ KP+W R EV+ EY +
Sbjct: 304 VKEGEEGEPKKKKTTKTEKYWDWELANETKPLWMRNSKEVEKGEYNE 350
>At2g04030.1 68415.m00371 heat shock protein, putative strong
similarity to heat shock protein [Arabidopsis thaliana]
GI:1906830; contains Pfam profiles PF02518: ATPase,
histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein, PF00183: Hsp90 protein
Length = 780
Score = 115 bits (276), Expect = 2e-26
Identities = 62/167 (37%), Positives = 90/167 (53%), Gaps = 5/167 (2%)
Frame = +1
Query: 34 NDMIGQFGVGFYSAFLVADSVTVASKH-NDDRQHVWQS--DANSFSVAEDPRGDT-LKRG 201
N +IGQFGVGFYSAFLVA+ V V++K D+Q+VW+S D++S+ + E+ D L+RG
Sbjct: 191 NGLIGQFGVGFYSAFLVAEKVVVSTKSPKSDKQYVWESVADSSSYLIREETDPDNILRRG 250
Query: 202 THLTLHMKEEAS-DYLQADTIRALVKKYSQFINFPIYLWASXXXXXXXXXXXXXXXXXXX 378
T +TL+++E+ ++ ++ I+ LVK YSQF+ FPIY W
Sbjct: 251 TQITLYLREDDKYEFAESTRIKNLVKNYSQFVGFPIYTWQE-------KSRTIEVEEDEP 303
Query: 379 XXXXXXXXXXXXXXXXXXXVWDWELMNDNKPIWTRKPSEVQDDEYTQ 519
WDWEL N+ KP+W R EV+ EY +
Sbjct: 304 VKEGEEGEPKKKKTTKTEKYWDWELANETKPLWMRNSKEVEKGEYNE 350
>At4g32350.1 68417.m04605 expressed protein contains Pfam profile:
PF03398 eukaryotic protein of unknown function, DUF292
Length = 732
Score = 31.5 bits (68), Expect = 0.36
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 85 ADSVTVASKHNDDRQHVWQSDANSFSVAEDPRGDTLKRGTH 207
A+S+ S+H++DR+ + S EDP GD +K G +
Sbjct: 453 AESINPGSRHHNDRESKENAVLVGKSTEEDPSGDNVKGGEY 493
>At1g67230.1 68414.m07652 expressed protein
Length = 1132
Score = 27.9 bits (59), Expect = 4.4
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = -3
Query: 312 QVNGEVDELRVLLDERADGVRLQ 244
++N E DELRV +ER++ +RLQ
Sbjct: 468 EINKEKDELRVTEEERSEYLRLQ 490
>At4g02460.1 68417.m00333 DNA mismatch repair protein, putative
similar to SP|P54278 PMS1 protein homolog 2 (DNA
mismatch repair protein PMS2) {Homo sapiens}; contains
Pfam profiles PF02518: ATPase, histidine kinase-, DNA
gyrase B-, and HSP90-like domain protein, PF01119: DNA
mismatch repair protein, C-terminal domain
Length = 923
Score = 27.5 bits (58), Expect = 5.8
Identities = 21/75 (28%), Positives = 37/75 (49%)
Frame = +1
Query: 40 MIGQFGVGFYSAFLVADSVTVASKHNDDRQHVWQSDANSFSVAEDPRGDTLKRGTHLTLH 219
++GQF +GF A L D + + +H D + ++ A S + + P L + +L L
Sbjct: 707 VLGQFNLGFIIAKLERD-LFIVDQHAADEKFNFEHLARSTVLNQQP----LLQPLNLELS 761
Query: 220 MKEEASDYLQADTIR 264
+EE + + D IR
Sbjct: 762 PEEEVTVLMHMDIIR 776
>At5g65910.1 68418.m08296 BSD domain-containing protein contains
Pfam profile PF03909: BSD domain
Length = 432
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +1
Query: 82 VADSVTVASKHNDDRQHVWQSDANSFSVAEDPRG 183
+A+S+ + + DD +H+ Q + S S ++ PRG
Sbjct: 8 IANSLKLDEEDEDDDKHLNQQPSESVSDSQSPRG 41
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.315 0.130 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,740,191
Number of Sequences: 28952
Number of extensions: 81584
Number of successful extensions: 327
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 315
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
- SilkBase 1999-2023 -