Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0116
(706 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1590 - 34640923-34641735,34642313-34642774,34643648-34643908 165 3e-41
10_08_0999 + 22121029-22121235,22121819-22122082,22122123-221223... 113 1e-25
01_06_0140 - 26881282-26881290,26882027-26882128,26882816-268829... 95 4e-20
12_01_0297 - 2244793-2244945,2245337-2245396,2245529-2245628,224... 91 8e-19
11_01_0296 - 2222329-2222481,2222777-2222836,2222965-2223064,222... 88 6e-18
01_01_1205 - 9693702-9694517,9694591-9695076,9697014-9697095,969... 87 1e-17
03_02_0854 - 11789850-11790524,11790602-11791063,11793119-11793328 84 9e-17
07_01_0579 + 4299104-4299652,4300845-4300935,4301018-4301211,430... 78 6e-15
11_01_0724 + 5981680-5981748,5982301-5982397,5982496-5982593,598... 74 1e-13
02_01_0510 + 3703715-3705040 30 1.6
08_02_1064 - 24033941-24034127,24034432-24034476,24035355-240354... 29 2.7
07_01_0989 + 8348706-8348882,8348988-8349028,8350071-8350120,835... 29 3.6
07_01_0724 + 5529642-5531141 29 3.6
01_01_0840 - 6557931-6558377 29 4.8
12_02_1084 - 25928373-25928426,25928551-25928652,25928913-259290... 28 6.3
11_06_0513 + 24466131-24469487 28 6.3
10_08_0625 + 19362303-19363853 28 6.3
05_01_0019 - 129767-129931,130078-130257,130491-130728,130833-13... 28 6.3
06_03_0589 - 22572914-22573035,22573353-22573412,22573554-22573692 28 8.3
>04_04_1590 - 34640923-34641735,34642313-34642774,34643648-34643908
Length = 511
Score = 165 bits (401), Expect = 3e-41
Identities = 88/191 (46%), Positives = 122/191 (63%), Gaps = 2/191 (1%)
Frame = +1
Query: 139 IDSKSSYIRLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREA 318
+++ + + + ++CT+GPASR+V +LEK++ GMNVAR NFSHG+HEYH ET+ N R+A
Sbjct: 13 LENDDARVPKTKLVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYHQETLDNLRQA 72
Query: 319 EKSYSAKLGSPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSPDYQEKGNA 498
+ + A+ LDTKGPEIRTG L+ G ++L KG+ + +TT DY+ KG+
Sbjct: 73 MHN------TGVLCAVMLDTKGPEIRTGFLKDG--KPIKLTKGQELTVTT--DYEIKGDE 122
Query: 499 DTIYVDYKNITNVVKPGNRIFIDDGLISIICQSV--SADTLTCTIENGGMLGSRKGVNLP 672
+ I + YK + VKPGN I DG IS+ S A T+ C EN MLG RK NLP
Sbjct: 123 NMITMSYKKLPVDVKPGNVILCADGTISLTVLSCDPKAGTVRCRCENTAMLGERKNCNLP 182
Query: 673 GIPVDLPAVSE 705
GI VDLP ++E
Sbjct: 183 GIVVDLPTLTE 193
>10_08_0999 +
22121029-22121235,22121819-22122082,22122123-22122324,
22122456-22122590,22122668-22122778,22122871-22122959,
22123237-22123299,22123461-22123636,22123785-22123887,
22124286-22124461,22124625-22124733,22124851-22124943,
22126294-22126435,22126655-22126671
Length = 628
Score = 113 bits (272), Expect = 1e-25
Identities = 68/189 (35%), Positives = 109/189 (57%), Gaps = 8/189 (4%)
Frame = +1
Query: 163 RLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKL 342
R + I+CTIGP++ ++ K+ ETGMNVARMN SHG H+ H + I + K Y+AK
Sbjct: 89 RKTKIVCTIGPSTNTREMIWKLAETGMNVARMNMSHGDHQSHQKVI----DLVKEYNAKN 144
Query: 343 GSPFSLAIALDTK--GPEIRTGLLEG-----GGSAE-VELKKGETIKLTTSPDYQEKGNA 498
+AI LDTK + RT +++G G E + L++G+ T K
Sbjct: 145 TDGNVIAIMLDTKQMSCDDRTSVMQGPEVRSGDVPEPIMLEEGQEFNFTIKRGVSTK--- 201
Query: 499 DTIYVDYKNITNVVKPGNRIFIDDGLISIICQSVSADTLTCTIENGGMLGSRKGVNLPGI 678
DT+ V+Y + N V+ G+ + +D G++S+ +S +ADT+ C + +GG L SR+ +N+ G
Sbjct: 202 DTVSVNYDDFINDVEVGDILLVDGGMMSLAVKSKTADTVKCEVVDGGELKSRRHLNVRGK 261
Query: 679 PVDLPAVSE 705
LP+++E
Sbjct: 262 SATLPSITE 270
>01_06_0140 -
26881282-26881290,26882027-26882128,26882816-26882924,
26883712-26883860,26883941-26884043,26884635-26884810,
26885004-26885066,26885258-26885346,26885428-26885538,
26885610-26885744,26886415-26886580,26886788-26886856,
26886943-26887230,26888612-26888866
Length = 607
Score = 95.5 bits (227), Expect = 4e-20
Identities = 63/203 (31%), Positives = 108/203 (53%), Gaps = 16/203 (7%)
Frame = +1
Query: 145 SKSSYIRLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEK 324
SK + R + I+CTIGP++ ++ K+ E GMNVAR+N SHG H H + I + K
Sbjct: 108 SKPNVRRKTKIVCTIGPSTNTKEMIWKLAEAGMNVARLNMSHGDHASHQKVI----DLVK 163
Query: 325 SYSAKLGSPFSLAIALDTKG-PEIRTGLLE-------GGGSAEVELKKG---ETIKLTTS 471
Y+A+ +AI LDTK E +LE G E++ G + I L T
Sbjct: 164 EYNAQTKDNV-IAIMLDTKSYTEYDVLMLECFFAVYASSGGIGPEVRSGDLPQPIMLETG 222
Query: 472 PDY-----QEKGNADTIYVDYKNITNVVKPGNRIFIDDGLISIICQSVSADTLTCTIENG 636
++ + G + V+Y + N V+ G+ + +D G++S++ +S + D++ C + +G
Sbjct: 223 QEFTFTIKRGVGTETCVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKCEVIDG 282
Query: 637 GMLGSRKGVNLPGIPVDLPAVSE 705
G L SR+ +N+ G LP++++
Sbjct: 283 GELKSRRHLNVRGKSATLPSITD 305
>12_01_0297 -
2244793-2244945,2245337-2245396,2245529-2245628,
2245712-2245779,2245922-2246017,2246156-2246244,
2246320-2246464,2246643-2246732,2246816-2246887,
2247052-2247132,2247361-2247492,2247613-2247690,
2247930-2248085,2248227-2248324,2248418-2248499
Length = 499
Score = 91.1 bits (216), Expect = 8e-19
Identities = 59/189 (31%), Positives = 101/189 (53%), Gaps = 9/189 (4%)
Frame = +1
Query: 166 LSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKLG 345
++ I+ T+GP SR+V + ++ GM+VAR +FS G EYH ET+ N + A KS + KL
Sbjct: 1 MTKIVGTLGPKSRSVDTISSCLKAGMSVARFDFSWGDAEYHQETLENLKVAIKS-TKKL- 58
Query: 346 SPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSPDYQEKGNADTIYVDYKN 525
A+ LDT GPE++ + A + L++ T+ LT PD ++ ++ + +++
Sbjct: 59 ----CAVMLDTVGPELQ---VVNKSEASISLEENGTVILT--PDQGQEASSQVLPINFAG 109
Query: 526 ITNVVKPGNRIFIDDGLIS--------IICQSVSADTLTCTIENGGML-GSRKGVNLPGI 678
+ VKPG+ IF+ L + + + D + C I+N L GS ++ I
Sbjct: 110 LAKAVKPGDTIFVGQYLFTGSETTSVWLEVSQIKGDDVVCVIKNTATLAGSLFTLHCSQI 169
Query: 679 PVDLPAVSE 705
+DLP +S+
Sbjct: 170 HIDLPTLSD 178
>11_01_0296 -
2222329-2222481,2222777-2222836,2222965-2223064,
2223152-2223219,2223369-2223464,2223603-2223691,
2223762-2223906,2224100-2224189,2224271-2224342,
2224543-2224623,2224766-2224897,2225026-2225103,
2225280-2225435,2225521-2225618,2225712-2225793
Length = 499
Score = 88.2 bits (209), Expect = 6e-18
Identities = 59/189 (31%), Positives = 99/189 (52%), Gaps = 9/189 (4%)
Frame = +1
Query: 166 LSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKLG 345
++ I+ T+GP SR V + ++ GM+VAR +FS G EYH ET+ N + A KS + KL
Sbjct: 1 MTKIVGTLGPKSRAVDTISSCLKAGMSVARFDFSWGDAEYHQETLENLKLAIKS-TKKL- 58
Query: 346 SPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSPDYQEKGNADTIYVDYKN 525
A+ LDT GPE++ + A + L+ T+ LT PD ++ +++ + +++
Sbjct: 59 ----CAVMLDTVGPELQ---VVNKSEAAISLEANGTVVLT--PDQGQEASSELLPINFSG 109
Query: 526 ITNVVKPGNRIFIDDGLIS--------IICQSVSADTLTCTIENGGML-GSRKGVNLPGI 678
+ +KPG IF+ L + + V D + C I+N L GS ++ I
Sbjct: 110 LAKALKPGATIFVGQYLFTGSETTSVWLEVSEVKGDDVVCVIKNSATLAGSLFTLHCSQI 169
Query: 679 PVDLPAVSE 705
+DLP +S+
Sbjct: 170 HIDLPTLSD 178
>01_01_1205 -
9693702-9694517,9694591-9695076,9697014-9697095,
9697876-9698051,9698326-9698580
Length = 604
Score = 87.0 bits (206), Expect = 1e-17
Identities = 50/114 (43%), Positives = 67/114 (58%), Gaps = 2/114 (1%)
Frame = +1
Query: 370 LDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSPDYQEKGNADTIYVDYKNITNVVKPG 549
L +GPEIRTG L+ G V+LKKG+ I T S DY KG+ + I + YK + +KPG
Sbjct: 176 LKIQGPEIRTGFLKDG--KPVQLKKGQEI--TVSTDYSIKGDDNMISMSYKKLAVDLKPG 231
Query: 550 NRIFIDDGLISIICQSVSADT--LTCTIENGGMLGSRKGVNLPGIPVDLPAVSE 705
+ I DG I++ + + C EN MLG RK VNLPG+ VDLP ++E
Sbjct: 232 SVILCADGTITLTVLHCDKEQGLVRCRCENTAMLGERKNVNLPGVIVDLPTLTE 285
Score = 74.9 bits (176), Expect = 6e-14
Identities = 37/78 (47%), Positives = 51/78 (65%)
Frame = +1
Query: 175 IICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKLGSPF 354
I+CT+GPASR+V ++ +++ GM VAR NFSHGSHEYH ET+ N R A +S +
Sbjct: 23 IVCTLGPASRSVEMIGRLLRAGMCVARFNFSHGSHEYHQETLDNLRAAMES------TGI 76
Query: 355 SLAIALDTKGPEIRTGLL 408
A+ LDTK + G+L
Sbjct: 77 LCAVMLDTKARDFVLGVL 94
>03_02_0854 - 11789850-11790524,11790602-11791063,11793119-11793328
Length = 448
Score = 84.2 bits (199), Expect = 9e-17
Identities = 46/110 (41%), Positives = 65/110 (59%), Gaps = 2/110 (1%)
Frame = +1
Query: 382 GPEIRTGLLEGGGSAEVELKKGETIKLTTSPDYQEKGNADTIYVDYKNITNVVKPGNRIF 561
GPEIRTG L+ G ++LK+G+ I +T DY KG+ + I + Y + +KPG+ I
Sbjct: 71 GPEIRTGFLKDG--KPIQLKQGKEITITI--DYSIKGDENLISMSYHKLAIDLKPGSTIL 126
Query: 562 IDDGLISIICQSVSADT--LTCTIENGGMLGSRKGVNLPGIPVDLPAVSE 705
DG I++ S + + C EN MLG RK VNLPG+ VDLP ++E
Sbjct: 127 CADGTITLTVLSCDCEQGLVRCRCENSAMLGERKNVNLPGVIVDLPTLTE 176
>07_01_0579 +
4299104-4299652,4300845-4300935,4301018-4301211,
4301501-4301622,4302378-4302856,4303033-4303334
Length = 578
Score = 78.2 bits (184), Expect = 6e-15
Identities = 48/161 (29%), Positives = 79/161 (49%)
Frame = +1
Query: 163 RLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKL 342
R + ++CT+GPA+ LE + GMNVAR+N HG E+H IR R +
Sbjct: 99 RRTKLVCTVGPATCGADELEALAVGGMNVARVNMCHGDREWHRGVIRAVRRLNEE----- 153
Query: 343 GSPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSPDYQEKGNADTIYVDYK 522
F++A+ +DT+G EI G L GG+A + + GE I + ++ TI+V+Y+
Sbjct: 154 -KGFAVAVMMDTEGSEIHMGDL--GGAAAAKAEDGE-IWTFSVRSFEAPPPERTIHVNYE 209
Query: 523 NITNVVKPGNRIFIDDGLISIICQSVSADTLTCTIENGGML 645
V+ G+ + +D G+ + C + G+L
Sbjct: 210 GFAEDVRVGDELLVDGGMARFEVVEKLGPDVKCRCTDPGLL 250
>11_01_0724 +
5981680-5981748,5982301-5982397,5982496-5982593,
5983535-5983690,5983986-5984063,5984135-5984266,
5984856-5984936,5985442-5985510,5985597-5985686,
5986001-5986145,5986218-5986276,5986384-5986479,
5986561-5986628,5986704-5986803,5986910-5986966,
5987179-5987337
Length = 517
Score = 74.1 bits (174), Expect = 1e-13
Identities = 55/189 (29%), Positives = 94/189 (49%), Gaps = 9/189 (4%)
Frame = +1
Query: 166 LSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKLG 345
L+ I+ T+GP S +V V+++ + GM VAR +FS YH ET+ N R+A ++ + KL
Sbjct: 29 LTKIVGTLGPNSHSVEVIQECLTAGMAVARFDFSWMDASYHQETLNNLRKAAQNVN-KL- 86
Query: 346 SPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSPDYQEKGNADTIYVDYKN 525
+ LDT GPEI+ GG +ELK G + +T PD + +++ + + +
Sbjct: 87 ----CPVMLDTLGPEIQVHNSTGG---PIELKAGNHVTIT--PDLSKAPSSEILPIKFGG 137
Query: 526 ITNVVKPGNRIFIDDGLIS--------IICQSVSADTLTCTIENGGML-GSRKGVNLPGI 678
+ VK G+ +FI L + + S + + C + N L G +++
Sbjct: 138 LAKAVKKGDTLFIGQYLFTGSETTSSWLEVVETSGENVECLVTNTATLAGPMFTLHVSKA 197
Query: 679 PVDLPAVSE 705
V LP +S+
Sbjct: 198 HVSLPTLSD 206
>02_01_0510 + 3703715-3705040
Length = 441
Score = 30.3 bits (65), Expect = 1.6
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2
Query: 347 HPSLWPSHWTLKD 385
HP LWP HW +KD
Sbjct: 192 HPFLWPDHWPVKD 204
>08_02_1064 -
24033941-24034127,24034432-24034476,24035355-24035421,
24035521-24035600,24035691-24035769,24035864-24035939
Length = 177
Score = 29.5 bits (63), Expect = 2.7
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Frame = +1
Query: 238 GMNVARMNFSHGSHEY--HAETIRNCREAEKSYSAKLGSPFSLAIALDTKGPEIRTGLLE 411
G NV N +Y +AE IR R E+ ++ SP+ L L G E+ T +
Sbjct: 79 GRNVDGRNIMVQFAKYGPNAEPIRKGRIIEEVEKSRDSSPWDLWYLLFQSGTEMTTEIEN 138
Query: 412 GGGSAEVELKKGETI 456
G E +KG +
Sbjct: 139 AGAEVAAEAEKGMAV 153
>07_01_0989 +
8348706-8348882,8348988-8349028,8350071-8350120,
8350502-8350646,8351570-8351626,8352141-8352261,
8352436-8352945,8353242-8353289
Length = 382
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 419 PPPSKSPVLISGPLVSNAMAKEKGEPSL 336
PPP+ SP L S P+ S +++EK +L
Sbjct: 335 PPPNPSPSLASAPVYSPVLSREKVRDAL 362
>07_01_0724 + 5529642-5531141
Length = 499
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +3
Query: 216 AREDDGDGNERGKDELLARFPRVPRRDHSQL-SRGREELQ 332
AR+DDGDG+ RG+D + A RV + ++ +R E+Q
Sbjct: 434 ARDDDGDGSFRGED-VAAAVRRVMAEEEGKVFARNAREMQ 472
>01_01_0840 - 6557931-6558377
Length = 148
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 231 GDGNERGKDELLARFPRVPRRDHSQLSR 314
GDG RG+D L R+P + RR S +R
Sbjct: 120 GDGKRRGRDGGLRRWPGMTRRRRSSSAR 147
>12_02_1084 -
25928373-25928426,25928551-25928652,25928913-25929039,
25929292-25930730,25931430-25931447
Length = 579
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 148 KSSYIRLSGIICTIGPASRNVAVLEK 225
K + IRL+ IIC P + VAVL+K
Sbjct: 481 KRNEIRLTNIICQFNPLVQQVAVLKK 506
>11_06_0513 + 24466131-24469487
Length = 1118
Score = 28.3 bits (60), Expect = 6.3
Identities = 24/94 (25%), Positives = 43/94 (45%)
Frame = +1
Query: 61 MAFAGAVEKPTVANVGSQLQHMCGLDIDSKSSYIRLSGIICTIGPASRNVAVLEKMMETG 240
+++AG +AN QL+ + + I IRL + C+ P + LE + +G
Sbjct: 874 ISYAGETFPCWMANTNPQLKKLTQIRI------IRLINLKCSSLPPLGQLHQLETLEISG 927
Query: 241 MNVARMNFSHGSHEYHAETIRNCREAEKSYSAKL 342
MN + S E +A+T R+ ++ S+ L
Sbjct: 928 MNAIKNVSSELHGELNADTFRSLKKIVFSHMVNL 961
>10_08_0625 + 19362303-19363853
Length = 516
Score = 28.3 bits (60), Expect = 6.3
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +1
Query: 421 SAEVELKK--GETIKLTTSPDYQEKGNADTIYVDYKNITNVVKPGNRIFIDDGLISIICQ 594
+A E KK GET K T E DT+ +D K + + GNR DD +I + +
Sbjct: 256 NARREYKKHGGETTKTTNKETTLEHSYVDTL-LDIK----LPEDGNRALTDDEIIKLCSE 310
Query: 595 SVSADTLT 618
++A T T
Sbjct: 311 FLNAGTDT 318
>05_01_0019 -
129767-129931,130078-130257,130491-130728,130833-131236,
131284-131427,131709-131995,132071-132150,132563-132714,
132793-132909,133292-133450,133546-133946,134106-134423,
135050-135095,135203-135310
Length = 932
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = -2
Query: 213 SYITGCRSNSTDYSRETNVRRLGVNVEAAHMLELGADVGDCRLFNCTRESHGYV 52
S I+ S + SR VR + N+E + + L GD R+ + + HG+V
Sbjct: 256 SQISSGHSINKQPSRTLVVRNITANIEDSDLTVLFQQYGDIRMLYTSFKHHGFV 309
>06_03_0589 - 22572914-22573035,22573353-22573412,22573554-22573692
Length = 106
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = -3
Query: 449 SPFFSSTSAEPPPSKSPVLISGPLVSNAMAKEKGEPSLAL*LFSASRQLRMVS 291
SP + S+ PPS +PV + G + A A + E S A+ + S++ RM S
Sbjct: 8 SPIPVAYSSGDPPSATPVPVPGSDLPAAPAAKSQEASPAVPVIDPSKEERMGS 60
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.135 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,849,292
Number of Sequences: 37544
Number of extensions: 428920
Number of successful extensions: 1565
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1551
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1815633512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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