Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0116
(706 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-12|CAJ30227.1| 558|Caenorhabditis elegans Hypothetical p... 250 1e-66
Z81068-4|CAE54896.1| 531|Caenorhabditis elegans Hypothetical pr... 250 1e-66
Z81068-3|CAB02983.1| 600|Caenorhabditis elegans Hypothetical pr... 250 1e-66
Z81068-2|CAB02984.1| 562|Caenorhabditis elegans Hypothetical pr... 250 1e-66
Z69385-1|CAA93424.2| 515|Caenorhabditis elegans Hypothetical pr... 219 1e-57
U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated p... 32 0.46
AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage ... 32 0.46
AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans Prion-like-(q... 29 3.2
U40417-13|AAA81420.1| 1330|Caenorhabditis elegans Hypothetical p... 28 5.7
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 28 7.5
AF025466-5|AAB71031.2| 428|Caenorhabditis elegans Nematode asta... 28 7.5
>Z81068-12|CAJ30227.1| 558|Caenorhabditis elegans Hypothetical
protein F25H5.3d protein.
Length = 558
Score = 250 bits (611), Expect = 1e-66
Identities = 117/199 (58%), Positives = 149/199 (74%)
Frame = +1
Query: 109 SQLQHMCGLDIDSKSSYIRLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYH 288
+ ++H+C LDI +R +GIICTIGPA +V +L+K++ GMN+AR+NFSHGSHEYH
Sbjct: 56 THMEHLCRLDIREAPHLVRQTGIICTIGPACASVEMLQKLILNGMNIARLNFSHGSHEYH 115
Query: 289 AETIRNCREAEKSYSAKLGSPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTT 468
A TI N REA S+S K + IALDTKGPEIRTGLL GG SAE+EL +G +I+LTT
Sbjct: 116 AGTIANVREAADSFSDKR----VIGIALDTKGPEIRTGLLAGGASAEIELARGASIRLTT 171
Query: 469 SPDYQEKGNADTIYVDYKNITNVVKPGNRIFIDDGLISIICQSVSADTLTCTIENGGMLG 648
P + E G A ++VDYKNI V+ G+R++IDDGLIS+I + + D + C++ENGGMLG
Sbjct: 172 DPHFSESGTAVNLFVDYKNIAKVLSVGSRVYIDDGLISLIVEELQTDAVICSVENGGMLG 231
Query: 649 SRKGVNLPGIPVDLPAVSE 705
SRKGVNLPG VDLPAVSE
Sbjct: 232 SRKGVNLPGTIVDLPAVSE 250
>Z81068-4|CAE54896.1| 531|Caenorhabditis elegans Hypothetical
protein F25H5.3c protein.
Length = 531
Score = 250 bits (611), Expect = 1e-66
Identities = 117/199 (58%), Positives = 149/199 (74%)
Frame = +1
Query: 109 SQLQHMCGLDIDSKSSYIRLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYH 288
+ ++H+C LDI +R +GIICTIGPA +V +L+K++ GMN+AR+NFSHGSHEYH
Sbjct: 29 THMEHLCRLDIREAPHLVRQTGIICTIGPACASVEMLQKLILNGMNIARLNFSHGSHEYH 88
Query: 289 AETIRNCREAEKSYSAKLGSPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTT 468
A TI N REA S+S K + IALDTKGPEIRTGLL GG SAE+EL +G +I+LTT
Sbjct: 89 AGTIANVREAADSFSDKR----VIGIALDTKGPEIRTGLLAGGASAEIELARGASIRLTT 144
Query: 469 SPDYQEKGNADTIYVDYKNITNVVKPGNRIFIDDGLISIICQSVSADTLTCTIENGGMLG 648
P + E G A ++VDYKNI V+ G+R++IDDGLIS+I + + D + C++ENGGMLG
Sbjct: 145 DPHFSESGTAVNLFVDYKNIAKVLSVGSRVYIDDGLISLIVEELQTDAVICSVENGGMLG 204
Query: 649 SRKGVNLPGIPVDLPAVSE 705
SRKGVNLPG VDLPAVSE
Sbjct: 205 SRKGVNLPGTIVDLPAVSE 223
>Z81068-3|CAB02983.1| 600|Caenorhabditis elegans Hypothetical
protein F25H5.3b protein.
Length = 600
Score = 250 bits (611), Expect = 1e-66
Identities = 117/199 (58%), Positives = 149/199 (74%)
Frame = +1
Query: 109 SQLQHMCGLDIDSKSSYIRLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYH 288
+ ++H+C LDI +R +GIICTIGPA +V +L+K++ GMN+AR+NFSHGSHEYH
Sbjct: 98 THMEHLCRLDIREAPHLVRQTGIICTIGPACASVEMLQKLILNGMNIARLNFSHGSHEYH 157
Query: 289 AETIRNCREAEKSYSAKLGSPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTT 468
A TI N REA S+S K + IALDTKGPEIRTGLL GG SAE+EL +G +I+LTT
Sbjct: 158 AGTIANVREAADSFSDKR----VIGIALDTKGPEIRTGLLAGGASAEIELARGASIRLTT 213
Query: 469 SPDYQEKGNADTIYVDYKNITNVVKPGNRIFIDDGLISIICQSVSADTLTCTIENGGMLG 648
P + E G A ++VDYKNI V+ G+R++IDDGLIS+I + + D + C++ENGGMLG
Sbjct: 214 DPHFSESGTAVNLFVDYKNIAKVLSVGSRVYIDDGLISLIVEELQTDAVICSVENGGMLG 273
Query: 649 SRKGVNLPGIPVDLPAVSE 705
SRKGVNLPG VDLPAVSE
Sbjct: 274 SRKGVNLPGTIVDLPAVSE 292
>Z81068-2|CAB02984.1| 562|Caenorhabditis elegans Hypothetical
protein F25H5.3a protein.
Length = 562
Score = 250 bits (611), Expect = 1e-66
Identities = 117/199 (58%), Positives = 149/199 (74%)
Frame = +1
Query: 109 SQLQHMCGLDIDSKSSYIRLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYH 288
+ ++H+C LDI +R +GIICTIGPA +V +L+K++ GMN+AR+NFSHGSHEYH
Sbjct: 60 THMEHLCRLDIREAPHLVRQTGIICTIGPACASVEMLQKLILNGMNIARLNFSHGSHEYH 119
Query: 289 AETIRNCREAEKSYSAKLGSPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTT 468
A TI N REA S+S K + IALDTKGPEIRTGLL GG SAE+EL +G +I+LTT
Sbjct: 120 AGTIANVREAADSFSDKR----VIGIALDTKGPEIRTGLLAGGASAEIELARGASIRLTT 175
Query: 469 SPDYQEKGNADTIYVDYKNITNVVKPGNRIFIDDGLISIICQSVSADTLTCTIENGGMLG 648
P + E G A ++VDYKNI V+ G+R++IDDGLIS+I + + D + C++ENGGMLG
Sbjct: 176 DPHFSESGTAVNLFVDYKNIAKVLSVGSRVYIDDGLISLIVEELQTDAVICSVENGGMLG 235
Query: 649 SRKGVNLPGIPVDLPAVSE 705
SRKGVNLPG VDLPAVSE
Sbjct: 236 SRKGVNLPGTIVDLPAVSE 254
>Z69385-1|CAA93424.2| 515|Caenorhabditis elegans Hypothetical
protein ZK593.1 protein.
Length = 515
Score = 219 bits (536), Expect = 1e-57
Identities = 103/198 (52%), Positives = 140/198 (70%)
Frame = +1
Query: 109 SQLQHMCGLDIDSKSSYIRLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYH 288
+ + H+CGL I + R +G+ICTIGPA +V L KM+ TGMN+AR+NFSHG+HE H
Sbjct: 16 TNISHLCGLRISERPQKTRKTGVICTIGPACSDVETLRKMINTGMNIARLNFSHGTHEAH 75
Query: 289 AETIRNCREAEKSYSAKLGSPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTT 468
A TI+ REA ++ +PF +AIALDTKGPEIRTG+ EV+L+ G++++++T
Sbjct: 76 AATIKTIREAAEN------APFPVAIALDTKGPEIRTGMF-ANNMKEVQLENGKSVRVST 128
Query: 469 SPDYQEKGNADTIYVDYKNITNVVKPGNRIFIDDGLISIICQSVSADTLTCTIENGGMLG 648
P + + IY DY+N+ VV+PG+RI+IDDGLIS+I +S + CTIENGG LG
Sbjct: 129 DPSMEFAATSSHIYADYRNLPKVVQPGSRIYIDDGLISLIVESCEETAVICTIENGGALG 188
Query: 649 SRKGVNLPGIPVDLPAVS 702
+RKGVNLPG VDLPAV+
Sbjct: 189 TRKGVNLPGTIVDLPAVT 206
>U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated
protein 2, isoform b protein.
Length = 2027
Score = 31.9 bits (69), Expect = 0.46
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -3
Query: 380 LVSNAMAKEKGEPSLAL*LFSASRQLRM-VSAWYSWEPCEKFILATFIPVSIIFS 219
L SNA KEKG SL + F+ +R A W P E FIL T I ++ S
Sbjct: 74 LSSNAPVKEKGPSSLFI--FAEDNIIRRNAKAIIEWGPFEYFILLTIIGNCVVLS 126
>AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage
activated calciumchannel alpha-1 subunit protein.
Length = 2027
Score = 31.9 bits (69), Expect = 0.46
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -3
Query: 380 LVSNAMAKEKGEPSLAL*LFSASRQLRM-VSAWYSWEPCEKFILATFIPVSIIFS 219
L SNA KEKG SL + F+ +R A W P E FIL T I ++ S
Sbjct: 74 LSSNAPVKEKGPSSLFI--FAEDNIIRRNAKAIIEWGPFEYFILLTIIGNCVVLS 126
>AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 85
protein.
Length = 2203
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +1
Query: 400 GLLEGGGSAEVELKKGETIKLTTSPDYQEKGNADTIYVDYKNITNVVKPGNRI 558
G+LE G S + ELK + K + D+ KG+ ++ D + + + P RI
Sbjct: 690 GVLEQGDSLDTELKMPKNKKRRSGGDHHHKGDENSDESDEEEEMDEIDPDLRI 742
>U40417-13|AAA81420.1| 1330|Caenorhabditis elegans Hypothetical
protein T08A9.1 protein.
Length = 1330
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = -2
Query: 213 SYITGCRSNSTDYSRETNVRRLGVNVEAA 127
+Y+ C S + + +E+++RRLG+N + A
Sbjct: 1246 AYVIFCSSPNRYFVKESSIRRLGINTQNA 1274
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical
protein T12D8.1 protein.
Length = 2561
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 704 SETAGRSTGMPGRLTPFRDPSIPPFSM 624
S +A S G L+PF DPS+P S+
Sbjct: 140 SASARPSRGQDAPLSPFSDPSVPQISL 166
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical
protein T12D8.1 protein.
Length = 2561
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 704 SETAGRSTGMPGRLTPFRDPSIPPFSM 624
S +A S G L+PF DPS+P S+
Sbjct: 140 SASARPSRGQDAPLSPFSDPSVPQISL 166
>AF025466-5|AAB71031.2| 428|Caenorhabditis elegans Nematode astacin
protease protein27 protein.
Length = 428
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 211 AVLEKMMETGMNVARMNFSHGSHEYHAETIRNCRE 315
A+ +M T +V+RMN + HE A T+ C++
Sbjct: 233 AMGNRMRATFQDVSRMNVLYNCHERCANTLNRCQQ 267
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.135 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,088,210
Number of Sequences: 27780
Number of extensions: 338447
Number of successful extensions: 1169
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1159
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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