Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0114
         (741 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ970245-1|CAI96717.1|  134|Anopheles gambiae putative reverse t...    27   0.46 
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    27   0.80 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   3.2  
AJ439060-6|CAD27757.1|  297|Anopheles gambiae hypothetical prote...    24   5.7  
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    24   5.7  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    23   7.5  

>AJ970245-1|CAI96717.1|  134|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 134

 Score = 27.5 bits (58), Expect = 0.46
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +2

Query: 251 VWDLFPESKLVKFVVSDSVAHILNTWAALQQNLTHVLN 364
           +W     SKL+K      + +I+N++ + +QN  H+LN
Sbjct: 81  IWHQGLLSKLIKLNFPSYLINIVNSFISNRQNKVHILN 118


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 26.6 bits (56), Expect = 0.80
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = +2

Query: 164 RGTGQVPLPPICKSLWTCSVEAAVEYCRIVWDLFPESKLVK 286
           R T +   P   K+++ C V + +EY  +VW     S + +
Sbjct: 877 RTTNEFRNPMCIKAVYNCIVRSVLEYSCVVWSPTTASSIAR 917


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = +2

Query: 119 GISSEYPI--DFDVSKGRGTGQVPLPPICKSL 208
           G+ S +P+     +S G G  QVP PP   SL
Sbjct: 576 GLPSHHPLHPSLGLSMGLGLPQVPQPPAGSSL 607


>AJ439060-6|CAD27757.1|  297|Anopheles gambiae hypothetical protein
           protein.
          Length = 297

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = +2

Query: 215 CSVEAAVEYCRIVWDLFPESKLVK 286
           C+ +   E C I+ ++FP+S  ++
Sbjct: 151 CNYDLFAEQCDILQEMFPDSSFIE 174


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +2

Query: 368 LCLVGPVRRGAGGDVVGLCAAIEALGEASPEQISR 472
           LCL     +   G  + LC  I ++ EA P  + R
Sbjct: 353 LCLPTKAAKQLAGRKLRLCGCISSIMEAMPVSVDR 387


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +2

Query: 332 ALQQNLTHVLNGLCLVGPVRRGAGGDVVGLCAAIEALGEASPEQISRTSTDRHFQN 499
           AL QNL +++ G C +   ++  G   +   +A   LG+  P   + T    H  N
Sbjct: 9   ALSQNLHNIMPGNCGLALQQKPIGSGQLTSSSAASLLGKQRPLAPAPTVLGGHRAN 64


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 789,895
Number of Sequences: 2352
Number of extensions: 16410
Number of successful extensions: 28
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76091949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)