Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0114
         (741 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC008368-1|AAH08368.1|  706|Homo sapiens chromosome 12 open read...   158   2e-38
BC003081-1|AAH03081.1|  706|Homo sapiens chromosome 12 open read...   158   2e-38
AK001492-1|BAA91721.1|  706|Homo sapiens protein ( Homo sapiens ...   158   2e-38
AK001499-1|BAA91725.1|  706|Homo sapiens protein ( Homo sapiens ...   151   2e-36

>BC008368-1|AAH08368.1|  706|Homo sapiens chromosome 12 open reading
           frame 11 protein.
          Length = 706

 Score =  158 bits (383), Expect = 2e-38
 Identities = 84/189 (44%), Positives = 116/189 (61%), Gaps = 9/189 (4%)
 Frame = +2

Query: 65  LFPVNHKTIFVLDHTPYFGISSEYPIDFDVS-KGRGTGQVPLPPICKSLWTCSVEAAVEY 241
           +F  +HKT+FV+DH PY   S    ++FD+  K R  G +PL PI KSLWTCSVE+++EY
Sbjct: 3   IFSESHKTVFVVDHCPYMAESCRQHVEFDMLVKNRTQGIIPLAPISKSLWTCSVESSMEY 62

Query: 242 CRIVWDLFPESKLVKFVVSDSVAHILNTWAALQQNLTHVLNGLCLVGPVRRGAGGD---- 409
           CRI++D+FP  KLV F+VSDS AH+LN+W    QNL  ++  L  VGP    A  +    
Sbjct: 63  CRIMYDIFPFKKLVNFIVSDSGAHVLNSWTQEDQNLQELMAALAAVGPPNPRADPECCSI 122

Query: 410 VVGLCAAIEALGEASPEQ-ISRT---STDRHFQNRGRIICITSARDDDSIRSLAEIALNT 577
           + GL AA+E L + +  Q  +RT          NRGRIICIT+A+ D  +R L +    T
Sbjct: 123 LHGLVAAVETLCKITEYQHEARTLLMENAERVGNRGRIICITNAKSDSHVRMLEDCVQET 182

Query: 578 LIQQNKKAS 604
           + + NK A+
Sbjct: 183 IHEHNKLAA 191


>BC003081-1|AAH03081.1|  706|Homo sapiens chromosome 12 open reading
           frame 11 protein.
          Length = 706

 Score =  158 bits (383), Expect = 2e-38
 Identities = 84/189 (44%), Positives = 116/189 (61%), Gaps = 9/189 (4%)
 Frame = +2

Query: 65  LFPVNHKTIFVLDHTPYFGISSEYPIDFDVS-KGRGTGQVPLPPICKSLWTCSVEAAVEY 241
           +F  +HKT+FV+DH PY   S    ++FD+  K R  G +PL PI KSLWTCSVE+++EY
Sbjct: 3   IFSESHKTVFVVDHCPYMAESCRQHVEFDMLVKNRTQGIIPLAPISKSLWTCSVESSMEY 62

Query: 242 CRIVWDLFPESKLVKFVVSDSVAHILNTWAALQQNLTHVLNGLCLVGPVRRGAGGD---- 409
           CRI++D+FP  KLV F+VSDS AH+LN+W    QNL  ++  L  VGP    A  +    
Sbjct: 63  CRIMYDIFPFKKLVNFIVSDSGAHVLNSWTQEDQNLQELMAALAAVGPPNPRADPECCSI 122

Query: 410 VVGLCAAIEALGEASPEQ-ISRT---STDRHFQNRGRIICITSARDDDSIRSLAEIALNT 577
           + GL AA+E L + +  Q  +RT          NRGRIICIT+A+ D  +R L +    T
Sbjct: 123 LHGLVAAVETLCKITEYQHEARTLLMENAERVGNRGRIICITNAKSDSHVRMLEDCVQET 182

Query: 578 LIQQNKKAS 604
           + + NK A+
Sbjct: 183 IHEHNKLAA 191


>AK001492-1|BAA91721.1|  706|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10630 fis, clone NT2RP2005622. ).
          Length = 706

 Score =  158 bits (383), Expect = 2e-38
 Identities = 84/189 (44%), Positives = 116/189 (61%), Gaps = 9/189 (4%)
 Frame = +2

Query: 65  LFPVNHKTIFVLDHTPYFGISSEYPIDFDVS-KGRGTGQVPLPPICKSLWTCSVEAAVEY 241
           +F  +HKT+FV+DH PY   S    ++FD+  K R  G +PL PI KSLWTCSVE+++EY
Sbjct: 3   IFSESHKTVFVVDHCPYMAESCRQHVEFDMLVKNRTQGIIPLAPISKSLWTCSVESSMEY 62

Query: 242 CRIVWDLFPESKLVKFVVSDSVAHILNTWAALQQNLTHVLNGLCLVGPVRRGAGGD---- 409
           CRI++D+FP  KLV F+VSDS AH+LN+W    QNL  ++  L  VGP    A  +    
Sbjct: 63  CRIMYDIFPFKKLVNFIVSDSGAHVLNSWTQEDQNLQELMAALAAVGPPNPRADPECCSI 122

Query: 410 VVGLCAAIEALGEASPEQ-ISRT---STDRHFQNRGRIICITSARDDDSIRSLAEIALNT 577
           + GL AA+E L + +  Q  +RT          NRGRIICIT+A+ D  +R L +    T
Sbjct: 123 LHGLVAAVETLCKITEYQHEARTLLMENAERVGNRGRIICITNAKSDSHVRMLEDCVQET 182

Query: 578 LIQQNKKAS 604
           + + NK A+
Sbjct: 183 IHEHNKLAA 191


>AK001499-1|BAA91725.1|  706|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10637 fis, clone NT2RP2005683. ).
          Length = 706

 Score =  151 bits (367), Expect = 2e-36
 Identities = 82/189 (43%), Positives = 113/189 (59%), Gaps = 9/189 (4%)
 Frame = +2

Query: 65  LFPVNHKTIFVLDHTPYFGISSEYPIDFDVS-KGRGTGQVPLPPICKSLWTCSVEAAVEY 241
           +F  +HKT+FV+DH PY   S    + FD+  K R  G +PL PI KSLW CSVE+++EY
Sbjct: 3   IFSESHKTVFVVDHCPYMAESCRQHVGFDMLVKNRTQGIIPLAPISKSLWPCSVESSMEY 62

Query: 242 CRIVWDLFPESKLVKFVVSDSVAHILNTWAALQQNLTHVLNGLCLVGPVRRGAGGD---- 409
           CRI++D+FP  K V F+VSDS AH+LN+W    QNL  ++  L  VGP    A  +    
Sbjct: 63  CRIMYDIFPFKKPVNFIVSDSGAHVLNSWTQEDQNLQELMAALAAVGPPNPRADPECCSI 122

Query: 410 VVGLCAAIEALGEASPEQ-ISRT---STDRHFQNRGRIICITSARDDDSIRSLAEIALNT 577
           + GL AA+E L + +  Q  +RT          NRGRIICIT+A+ D  +R L +    T
Sbjct: 123 LHGLVAAVETLCKITEYQHEARTLLMENAERVGNRGRIICITNAKSDSHVRMLEDCVQET 182

Query: 578 LIQQNKKAS 604
           + + NK A+
Sbjct: 183 IHEHNKLAA 191


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,378,252
Number of Sequences: 237096
Number of extensions: 2183143
Number of successful extensions: 4828
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4820
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)