Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0112
         (660 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein RS...   192   6e-51
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   2.8  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    24   4.9  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   8.5  

>Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein RS11
           protein.
          Length = 151

 Score =  192 bits (469), Expect = 6e-51
 Identities = 95/136 (69%), Positives = 111/136 (81%)
 Frame = +1

Query: 7   RSFQKQPTVFLNRKKGIGVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCPFTGNVSI 186
           R+FQKQ  + LNRK    V R +K LR H  +GLGFKTP+EAI GTYIDKKCPFTG++SI
Sbjct: 8   RAFQKQLGINLNRKN---VSR-KKGLRMHHSIGLGFKTPKEAITGTYIDKKCPFTGHISI 63

Query: 187 RGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 366
           RGRILTGVV+K  +   + IRRDYL ++ KY+ FEKR+RNM +HLSPCFRDVE GDIVT+
Sbjct: 64  RGRILTGVVRKCIV--LLYIRRDYLQFIRKYDTFEKRNRNMRLHLSPCFRDVEAGDIVTL 121

Query: 367 GECRPLSKTVRFNVLK 414
           GECRPLSKTVRFNVLK
Sbjct: 122 GECRPLSKTVRFNVLK 137


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
 Frame = -1

Query: 204  GEDAAADRNVTSEGTLLVNVGT-LNRLTGSLETEAHILVVSQRFSAPLHTNTFLAVQKDC 28
            GED   D+   S+GTLL  +GT  N +   + T+  +    +R ++   + +FL    DC
Sbjct: 1268 GEDDTGDKKTDSDGTLL-EIGTWSNEMAVGVGTDNDMGEEGRRGAS---SPSFLRYDSDC 1323


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = -1

Query: 171 SEGTLL-VNVGTLNRLTGSLETEAHILVVSQRFSAPLHTNTFLAV 40
           ++G +L +++GTL++L GSL  E  +        +P H    L++
Sbjct: 303 AQGDVLELDIGTLDQLAGSLADELTLQQNDYFKGSPAHRKPLLSM 347


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1248

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -1

Query: 126  TGSLETEAHILVVSQRFS 73
            TGS+E+ AH+L    RF+
Sbjct: 951  TGSVESVAHVLFYCPRFA 968


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 658,130
Number of Sequences: 2352
Number of extensions: 13070
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)