Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0111
         (724 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    23   2.5  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   4.4  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   4.4  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
 Frame = -1

Query: 298 IKITVFFSFEKLTLR-CRAIWALNWVTTNVLVILQTSAMIITVDL-LNERMAHQQPQTKT 125
           IK+ +  S +KL +  CR     N +  ++LV +  + +++  DL +   +     Q K 
Sbjct: 188 IKLGIKLSNDKLEITACRLFKIDNSLILDLLVFITINFVVLLGDLYVTLYIILTNNQAKY 247

Query: 124 DSERV*PLSASLLKELLNRIFELYHFSFCSKHIS 23
            +  +      L+K  +  IFELY+ S   +++S
Sbjct: 248 CTTLI-----GLIKNCVIVIFELYYLSHVCQNVS 276


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +1

Query: 184 SLLTSAE*LKHL*LPNSVPIWRDISK*VS 270
           ++L+S E L H   P   PI+  +SK VS
Sbjct: 24  AVLSSDEELFHQKCPKPAPIYSPVSKPVS 52


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -1

Query: 265 LTLRCRAIWALNWVTTNVLVILQTSAMIIT 176
           L ++     AL W  TNV    +T  + +T
Sbjct: 150 LIVKASTAQALGWAPTNVFTFPETQFIAVT 179


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,451
Number of Sequences: 336
Number of extensions: 3516
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)