Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0110
         (631 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    25   0.69 
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    25   0.69 
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      25   0.69 
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      25   0.69 
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    23   1.6  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   2.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.8  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    22   3.7  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    22   4.9  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   4.9  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   6.4  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   8.5  

>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 24.6 bits (51), Expect = 0.69
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +3

Query: 54  GQRSENNRDDVHARRPQTFRISANGFQIRQH 146
           G  SENN D+ +     T+ +    F IRQH
Sbjct: 358 GPNSENNLDNFYLIHTDTYFLRDIIFAIRQH 388


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 24.6 bits (51), Expect = 0.69
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +3

Query: 54  GQRSENNRDDVHARRPQTFRISANGFQIRQH 146
           G  SENN D+ +     T+ +    F IRQH
Sbjct: 360 GPNSENNLDNFYLIHTDTYFLRDIIFAIRQH 390


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 24.6 bits (51), Expect = 0.69
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +3

Query: 54  GQRSENNRDDVHARRPQTFRISANGFQIRQH 146
           G  SENN D+ +     T+ +    F IRQH
Sbjct: 358 GPNSENNLDNFYLIHTDTYFLRDIIFAIRQH 388


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 24.6 bits (51), Expect = 0.69
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +3

Query: 54  GQRSENNRDDVHARRPQTFRISANGFQIRQH 146
           G  SENN D+ +     T+ +    F IRQH
Sbjct: 360 GPNSENNLDNFYLIHTDTYFLRDIIFAIRQH 390


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +1

Query: 388 RPSICNLYRWRYRALGDLC 444
           R SI +L+ W++  + D+C
Sbjct: 27  RNSIVHLFEWKWSDIADVC 45


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 14/55 (25%), Positives = 21/55 (38%)
 Frame = +1

Query: 46  YLLVKEAKIIAMTCTHAALKRSELVQMGFKYDNILMEESAQILEIETFIPLLLQN 210
           Y  V   K +A  CT   +   +   + F +DN         +EI    P+L  N
Sbjct: 56  YAFVAPVKCLAFFCTALVIFYCQEGSVDFLFDNFSAAFQDHNIEITEVAPVLPGN 110


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 14/55 (25%), Positives = 21/55 (38%)
 Frame = +1

Query: 46  YLLVKEAKIIAMTCTHAALKRSELVQMGFKYDNILMEESAQILEIETFIPLLLQN 210
           Y  V   K +A  CT   +   +   + F +DN         +EI    P+L  N
Sbjct: 289 YAFVAPVKCLAFFCTALVIFYCQEGSVDFLFDNFSAAFQDHNIEITEVAPVLPGN 343


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 14/55 (25%), Positives = 21/55 (38%)
 Frame = +1

Query: 46  YLLVKEAKIIAMTCTHAALKRSELVQMGFKYDNILMEESAQILEIETFIPLLLQN 210
           Y  V   K +A  CT   +   +   + F +DN         +EI    P+L  N
Sbjct: 289 YAFVAPVKCLAFFCTALVIFYCQEGSVDFLFDNFSAAFQDHNIEITEVAPVLPGN 343


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +1

Query: 325 LFTRMVRLGVPYVELDAQGRARPSICNLYRWRYRALGDLC 444
           L T  + L VP+   D     R SI +L+ W++  + D C
Sbjct: 10  LATLALGLFVPHFAAD-----RNSIVHLFEWKWSDIADEC 44


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 388 RPSICNLYRWRYRALGDLC 444
           R SI +L+ W++  + D C
Sbjct: 27  RNSIVHLFEWKWSDIADEC 45


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 15/37 (40%), Positives = 15/37 (40%)
 Frame = +3

Query: 171 PRDRDVHTAAAAESAGRQVPAEALDHDRRPPPAAPGR 281
           P  R    AAAA  A R   A    HD RP  A   R
Sbjct: 279 PAVRAAGDAAAARGAARADGAGGPLHDHRPALAQQRR 315


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 452 RSSRSTAPPTRACD 493
           RS R   PPT  CD
Sbjct: 195 RSLRCVVPPTEDCD 208


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -1

Query: 460  GAASRGTGRPAPGSASGTG 404
            G   +GT  P P  +SG G
Sbjct: 1103 GVPLKGTAVPPPSGSSGPG 1121


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,201
Number of Sequences: 336
Number of extensions: 3195
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)