Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0110
(631 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC127112-1|AAI27113.1| 1485|Homo sapiens aquarius homolog (mouse... 371 e-102
BC127111-1|AAI27112.1| 1485|Homo sapiens aquarius homolog (mouse... 371 e-102
BC036913-1|AAH36913.1| 591|Homo sapiens AQR protein protein. 371 e-102
AB011132-1|BAA25486.3| 1521|Homo sapiens KIAA0560 protein protein. 371 e-102
BC108262-1|AAI08263.1| 464|Homo sapiens AQR protein protein. 353 4e-97
AL049766-4|CAC33877.1| 1918|Homo sapiens zinc finger, NFX1-type ... 64 3e-10
AL049766-3|CAI22429.1| 1270|Homo sapiens zinc finger, NFX1-type ... 64 3e-10
AK023836-1|BAB14696.1| 1137|Homo sapiens protein ( Homo sapiens ... 64 3e-10
AB037825-1|BAA92642.1| 1925|Homo sapiens KIAA1404 protein protein. 64 3e-10
U65533-1|AAC50771.1| 1118|Homo sapiens regulator of nonsense tra... 58 3e-08
U59323-1|AAC51140.1| 1118|Homo sapiens homolog of yeast UPF1 pro... 58 3e-08
D86988-1|BAA19664.2| 1151|Homo sapiens KIAA0221 protein. 58 3e-08
BC039817-1|AAH39817.1| 1118|Homo sapiens UPF1 regulator of nonse... 58 3e-08
AF074016-1|AAC26788.1| 1118|Homo sapiens nonsense-mediated mRNA ... 58 3e-08
AC003972-1|AAB94785.1| 1118|Homo sapiens pNORF1 protein. 58 3e-08
BC106017-1|AAI06018.1| 867|Homo sapiens SETX protein protein. 50 7e-06
BC078166-1|AAH78166.1| 917|Homo sapiens SETX protein protein. 50 7e-06
BC032622-1|AAH32622.2| 1030|Homo sapiens SETX protein protein. 50 7e-06
BC032600-1|AAH32600.1| 828|Homo sapiens SETX protein protein. 50 7e-06
AY362728-1|AAR13367.1| 2677|Homo sapiens ataxia/oculomotor aprax... 50 7e-06
AL353701-2|CAM14151.1| 2677|Homo sapiens senataxin protein. 50 7e-06
AL159997-5|CAI40857.1| 948|Homo sapiens senataxin protein. 50 7e-06
AL159997-2|CAI40854.1| 2677|Homo sapiens senataxin protein. 50 7e-06
AK001456-1|BAA91701.1| 828|Homo sapiens protein ( Homo sapiens ... 50 7e-06
AB014525-1|BAA31600.2| 2663|Homo sapiens KIAA0625 protein protein. 50 7e-06
AK126054-1|BAC86416.1| 926|Homo sapiens protein ( Homo sapiens ... 48 3e-05
BC150283-1|AAI50284.1| 2080|Homo sapiens peroxisomal proliferato... 46 8e-05
AL121829-16|CAI95749.1| 2080|Homo sapiens RP4-697K14.7 protein. 46 8e-05
AK074171-1|BAB84997.1| 1124|Homo sapiens FLJ00244 protein protein. 46 8e-05
AK055611-1|BAB70969.1| 413|Homo sapiens protein ( Homo sapiens ... 46 8e-05
AF517673-1|AAM74197.1| 2080|Homo sapiens peroxisomal proliferato... 46 8e-05
AB201715-1|BAE46995.1| 2649|Homo sapiens PPAR gamma DBD-interact... 46 8e-05
AB051556-1|BAB21860.2| 2114|Homo sapiens KIAA1769 protein protein. 46 8e-05
D42046-1|BAA07647.1| 1077|Homo sapiens KIAA0083 protein. 41 0.003
BC053574-1|AAH53574.1| 494|Homo sapiens DNA2L protein protein. 41 0.003
BC041115-1|AAH41115.1| 435|Homo sapiens DNA2L protein protein. 41 0.003
BC028188-1|AAH28188.1| 378|Homo sapiens Unknown (protein for IM... 41 0.003
AL136233-5|CAI17238.1| 1040|Homo sapiens DNA2 DNA replication he... 41 0.003
AL136233-4|CAI17237.1| 374|Homo sapiens DNA2 DNA replication he... 41 0.003
L24544-1|AAA70430.1| 993|Homo sapiens DNA helicase protein. 34 0.36
L14754-1|AAA53082.1| 993|Homo sapiens DNA-binding protein protein. 34 0.36
BC105090-1|AAI05091.1| 993|Homo sapiens immunoglobulin mu bindi... 34 0.36
BC105088-1|AAI05089.1| 993|Homo sapiens immunoglobulin mu bindi... 34 0.36
BC025299-1|AAH25299.1| 868|Homo sapiens Unknown (protein for IM... 34 0.36
BC000290-1|AAH00290.1| 868|Homo sapiens IGHMBP2 protein protein. 34 0.36
AK128468-1|BAC87454.1| 187|Homo sapiens protein ( Homo sapiens ... 34 0.36
AC007192-1|AAD22670.1| 681|Homo sapiens KIAA0561 protein [AA 62... 34 0.48
AB011133-1|BAA25487.1| 1308|Homo sapiens KIAA0561 protein protein. 34 0.48
BC125271-1|AAI25272.1| 641|Homo sapiens PCLO protein protein. 32 1.5
BC122565-1|AAI22566.1| 641|Homo sapiens PCLO protein protein. 32 1.5
X69910-1|CAA49535.2| 602|Homo sapiens P63 protein protein. 31 2.5
BC082972-1|AAH82972.1| 602|Homo sapiens cytoskeleton-associated... 31 2.5
AK223563-1|BAD97283.1| 602|Homo sapiens cytoskeleton-associated... 31 2.5
S74683-1|AAB32387.1| 327|Homo sapiens ADP-ribosyltransferase pr... 31 4.5
DQ083949-1|AAY68214.1| 292|Homo sapiens aquaporin 3 protein. 31 4.5
CR542025-1|CAG46822.1| 292|Homo sapiens AQP3 protein. 31 4.5
CR541991-1|CAG46788.1| 292|Homo sapiens AQP3 protein. 31 4.5
BT007199-1|AAP35863.1| 292|Homo sapiens aquaporin 3 protein. 31 4.5
BC111729-1|AAI11730.1| 327|Homo sapiens ADP-ribosyltransferase ... 31 4.5
BC069102-1|AAH69102.1| 327|Homo sapiens ADP-ribosyltransferase ... 31 4.5
BC013566-1|AAH13566.1| 292|Homo sapiens aquaporin 3 (Gill blood... 31 4.5
AL356218-9|CAI13311.1| 292|Homo sapiens aquaporin 3 (Gill blood... 31 4.5
AB001325-1|BAA19237.1| 292|Homo sapiens aquaporin 3 protein. 31 4.5
BC042011-1|AAH42011.1| 558|Homo sapiens CASKIN1 protein protein. 30 5.9
BC034988-1|AAH34988.1| 1036|Homo sapiens ULK2 protein protein. 30 5.9
BC028048-1|AAH28048.1| 800|Homo sapiens leukocyte receptor clus... 30 5.9
AB067519-1|BAB67825.1| 795|Homo sapiens KIAA1932 protein protein. 30 5.9
AB014523-1|BAA31598.2| 1100|Homo sapiens KIAA0623 protein protein. 30 5.9
BC106040-1|AAI06041.1| 135|Homo sapiens MSTP150 protein. 30 7.8
BC101840-1|AAI01841.1| 135|Homo sapiens MSTP150 protein. 30 7.8
BC101838-1|AAI01839.1| 135|Homo sapiens MSTP150 protein. 30 7.8
>BC127112-1|AAI27113.1| 1485|Homo sapiens aquarius homolog (mouse)
protein.
Length = 1485
Score = 371 bits (912), Expect = e-102
Identities = 172/210 (81%), Positives = 191/210 (90%)
Frame = +1
Query: 1 FRAFELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRSELVQMGFKYDNILMEESAQILEI 180
FRA ELLRSGLDRSKYLLVKEAKIIAMTCTHAALKR +LV++GFKYDNILMEE+AQILEI
Sbjct: 1011 FRASELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEI 1070
Query: 181 ETFIPLLLQNPQDGRSRLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPY 360
ETFIPLLLQNPQDG SRLKRWIMIGDHHQLPPV+KNMAFQKY NMEQSLFTR VR+GVP
Sbjct: 1071 ETFIPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPT 1130
Query: 361 VELDAQGRARPSICNLYRWRYRALGDLCHVTQLPEYRAANAGLRHDFQLVNVDDFNGFGE 540
V+LDAQGRAR S+CNLY WRY+ LG+L HV LPE+ ANAGL +DFQL+NV+DF G GE
Sbjct: 1131 VDLDAQGRARASLCNLYNWRYKNLGNLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGE 1190
Query: 541 TEPSPYFYQNLAEAEYVVAVFMYMRLIGWP 630
+EP+PYFYQNL EAEYVVA+FMYM L+G+P
Sbjct: 1191 SEPNPYFYQNLGEAEYVVALFMYMCLLGYP 1220
>BC127111-1|AAI27112.1| 1485|Homo sapiens aquarius homolog (mouse)
protein.
Length = 1485
Score = 371 bits (912), Expect = e-102
Identities = 172/210 (81%), Positives = 191/210 (90%)
Frame = +1
Query: 1 FRAFELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRSELVQMGFKYDNILMEESAQILEI 180
FRA ELLRSGLDRSKYLLVKEAKIIAMTCTHAALKR +LV++GFKYDNILMEE+AQILEI
Sbjct: 1011 FRASELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEI 1070
Query: 181 ETFIPLLLQNPQDGRSRLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPY 360
ETFIPLLLQNPQDG SRLKRWIMIGDHHQLPPV+KNMAFQKY NMEQSLFTR VR+GVP
Sbjct: 1071 ETFIPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPT 1130
Query: 361 VELDAQGRARPSICNLYRWRYRALGDLCHVTQLPEYRAANAGLRHDFQLVNVDDFNGFGE 540
V+LDAQGRAR S+CNLY WRY+ LG+L HV LPE+ ANAGL +DFQL+NV+DF G GE
Sbjct: 1131 VDLDAQGRARASLCNLYNWRYKNLGNLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGE 1190
Query: 541 TEPSPYFYQNLAEAEYVVAVFMYMRLIGWP 630
+EP+PYFYQNL EAEYVVA+FMYM L+G+P
Sbjct: 1191 SEPNPYFYQNLGEAEYVVALFMYMCLLGYP 1220
>BC036913-1|AAH36913.1| 591|Homo sapiens AQR protein protein.
Length = 591
Score = 371 bits (912), Expect = e-102
Identities = 172/210 (81%), Positives = 191/210 (90%)
Frame = +1
Query: 1 FRAFELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRSELVQMGFKYDNILMEESAQILEI 180
FRA ELLRSGLDRSKYLLVKEAKIIAMTCTHAALKR +LV++GFKYDNILMEE+AQILEI
Sbjct: 117 FRASELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEI 176
Query: 181 ETFIPLLLQNPQDGRSRLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPY 360
ETFIPLLLQNPQDG SRLKRWIMIGDHHQLPPV+KNMAFQKY NMEQSLFTR VR+GVP
Sbjct: 177 ETFIPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPT 236
Query: 361 VELDAQGRARPSICNLYRWRYRALGDLCHVTQLPEYRAANAGLRHDFQLVNVDDFNGFGE 540
V+LDAQGRAR S+CNLY WRY+ LG+L HV LPE+ ANAGL +DFQL+NV+DF G GE
Sbjct: 237 VDLDAQGRARASLCNLYNWRYKNLGNLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGE 296
Query: 541 TEPSPYFYQNLAEAEYVVAVFMYMRLIGWP 630
+EP+PYFYQNL EAEYVVA+FMYM L+G+P
Sbjct: 297 SEPNPYFYQNLGEAEYVVALFMYMCLLGYP 326
>AB011132-1|BAA25486.3| 1521|Homo sapiens KIAA0560 protein protein.
Length = 1521
Score = 371 bits (912), Expect = e-102
Identities = 172/210 (81%), Positives = 191/210 (90%)
Frame = +1
Query: 1 FRAFELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRSELVQMGFKYDNILMEESAQILEI 180
FRA ELLRSGLDRSKYLLVKEAKIIAMTCTHAALKR +LV++GFKYDNILMEE+AQILEI
Sbjct: 1047 FRASELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEI 1106
Query: 181 ETFIPLLLQNPQDGRSRLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPY 360
ETFIPLLLQNPQDG SRLKRWIMIGDHHQLPPV+KNMAFQKY NMEQSLFTR VR+GVP
Sbjct: 1107 ETFIPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPT 1166
Query: 361 VELDAQGRARPSICNLYRWRYRALGDLCHVTQLPEYRAANAGLRHDFQLVNVDDFNGFGE 540
V+LDAQGRAR S+CNLY WRY+ LG+L HV LPE+ ANAGL +DFQL+NV+DF G GE
Sbjct: 1167 VDLDAQGRARASLCNLYNWRYKNLGNLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGE 1226
Query: 541 TEPSPYFYQNLAEAEYVVAVFMYMRLIGWP 630
+EP+PYFYQNL EAEYVVA+FMYM L+G+P
Sbjct: 1227 SEPNPYFYQNLGEAEYVVALFMYMCLLGYP 1256
>BC108262-1|AAI08263.1| 464|Homo sapiens AQR protein protein.
Length = 464
Score = 353 bits (867), Expect = 4e-97
Identities = 162/199 (81%), Positives = 181/199 (90%)
Frame = +1
Query: 34 DRSKYLLVKEAKIIAMTCTHAALKRSELVQMGFKYDNILMEESAQILEIETFIPLLLQNP 213
DRSKYLLVKEAKIIAMTCTHAALKR +LV++GFKYDNILMEE+AQILEIETFIPLLLQNP
Sbjct: 1 DRSKYLLVKEAKIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLLLQNP 60
Query: 214 QDGRSRLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARP 393
QDG SRLKRWIMIGDHHQLPPV+KNMAFQKY NMEQSLFTR VR+GVP V+LDAQGRAR
Sbjct: 61 QDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQGRARA 120
Query: 394 SICNLYRWRYRALGDLCHVTQLPEYRAANAGLRHDFQLVNVDDFNGFGETEPSPYFYQNL 573
S+CNLY WRY+ LG+L HV LPE+ ANAGL +DFQL+NV+DF G GE+EP+PYFYQNL
Sbjct: 121 SLCNLYNWRYKNLGNLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEPNPYFYQNL 180
Query: 574 AEAEYVVAVFMYMRLIGWP 630
EAEYVVA+FMYM L+G+P
Sbjct: 181 GEAEYVVALFMYMCLLGYP 199
>AL049766-4|CAC33877.1| 1918|Homo sapiens zinc finger, NFX1-type
containing 1 protein.
Length = 1918
Score = 64.5 bits (150), Expect = 3e-10
Identities = 40/119 (33%), Positives = 64/119 (53%)
Frame = +1
Query: 52 LVKEAKIIAMTCTHAALKRSELVQMGFKYDNILMEESAQILEIETFIPLLLQNPQDGRSR 231
++K+A+++ MT T AA R L ++ + +++EE+A++LE T L
Sbjct: 974 ILKDAQVVGMTTTGAAKYRQILQKVEPRI--VIVEEAAEVLEAHTIATL--------SKA 1023
Query: 232 LKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSICNL 408
+ I+IGDH QL P K N+E SLF R+V++ +P+V L+ Q R P I L
Sbjct: 1024 CQHLILIGDHQQLRPSANVYDLAKNFNLEVSLFERLVKVNIPFVRLNYQHRMCPEIARL 1082
>AL049766-3|CAI22429.1| 1270|Homo sapiens zinc finger, NFX1-type
containing 1 protein.
Length = 1270
Score = 64.5 bits (150), Expect = 3e-10
Identities = 40/119 (33%), Positives = 64/119 (53%)
Frame = +1
Query: 52 LVKEAKIIAMTCTHAALKRSELVQMGFKYDNILMEESAQILEIETFIPLLLQNPQDGRSR 231
++K+A+++ MT T AA R L ++ + +++EE+A++LE T L
Sbjct: 974 ILKDAQVVGMTTTGAAKYRQILQKVEPRI--VIVEEAAEVLEAHTIATL--------SKA 1023
Query: 232 LKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSICNL 408
+ I+IGDH QL P K N+E SLF R+V++ +P+V L+ Q R P I L
Sbjct: 1024 CQHLILIGDHQQLRPSANVYDLAKNFNLEVSLFERLVKVNIPFVRLNYQHRMCPEIARL 1082
>AK023836-1|BAB14696.1| 1137|Homo sapiens protein ( Homo sapiens
cDNA FLJ13774 fis, clone PLACE4000326, weakly similar to
NAM7 PROTEIN (NONSENSE-MEDIATED MRNA DECAY PROTEIN 1).
).
Length = 1137
Score = 64.5 bits (150), Expect = 3e-10
Identities = 40/119 (33%), Positives = 64/119 (53%)
Frame = +1
Query: 52 LVKEAKIIAMTCTHAALKRSELVQMGFKYDNILMEESAQILEIETFIPLLLQNPQDGRSR 231
++K+A+++ MT T AA R L ++ + +++EE+A++LE T L
Sbjct: 266 ILKDAQVVGMTTTGAAKYRQILQKVEPRI--VIVEEAAEVLEAHTIATL--------SKA 315
Query: 232 LKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSICNL 408
+ I+IGDH QL P K N+E SLF R+V++ +P+V L+ Q R P I L
Sbjct: 316 CQHLILIGDHQQLRPSANVYDLAKNFNLEVSLFERLVKVNIPFVRLNYQHRMCPEIARL 374
>AB037825-1|BAA92642.1| 1925|Homo sapiens KIAA1404 protein protein.
Length = 1925
Score = 64.5 bits (150), Expect = 3e-10
Identities = 40/119 (33%), Positives = 64/119 (53%)
Frame = +1
Query: 52 LVKEAKIIAMTCTHAALKRSELVQMGFKYDNILMEESAQILEIETFIPLLLQNPQDGRSR 231
++K+A+++ MT T AA R L ++ + +++EE+A++LE T L
Sbjct: 981 ILKDAQVVGMTTTGAAKYRQILQKVEPRI--VIVEEAAEVLEAHTIATL--------SKA 1030
Query: 232 LKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSICNL 408
+ I+IGDH QL P K N+E SLF R+V++ +P+V L+ Q R P I L
Sbjct: 1031 CQHLILIGDHQQLRPSANVYDLAKNFNLEVSLFERLVKVNIPFVRLNYQHRMCPEIARL 1089
>U65533-1|AAC50771.1| 1118|Homo sapiens regulator of nonsense
transcript stability protein.
Length = 1118
Score = 57.6 bits (133), Expect = 3e-08
Identities = 42/116 (36%), Positives = 61/116 (52%)
Frame = +1
Query: 52 LVKEAKIIAMTCTHAALKRSELVQMGFKYDNILMEESAQILEIETFIPLLLQNPQDGRSR 231
L+ A +I TC A R L +M F+ +IL++ES Q E E +P++L
Sbjct: 606 LLMNADVICCTCVGAGDPR--LAKMQFR--SILIDESTQATEPECMVPVVLG-------- 653
Query: 232 LKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSI 399
K+ I++GDH QL PVV K + QSLF R+V LG+ + L Q R P++
Sbjct: 654 AKQLILVGDHCQLGPVVMCKKAAK-AGLSQSLFERLVVLGIRPIRLQVQYRMHPAL 708
>U59323-1|AAC51140.1| 1118|Homo sapiens homolog of yeast UPF1
protein.
Length = 1118
Score = 57.6 bits (133), Expect = 3e-08
Identities = 42/116 (36%), Positives = 61/116 (52%)
Frame = +1
Query: 52 LVKEAKIIAMTCTHAALKRSELVQMGFKYDNILMEESAQILEIETFIPLLLQNPQDGRSR 231
L+ A +I TC A R L +M F+ +IL++ES Q E E +P++L
Sbjct: 606 LLMNADVICCTCVGAGDPR--LAKMQFR--SILIDESTQATEPECMVPVVLG-------- 653
Query: 232 LKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSI 399
K+ I++GDH QL PVV K + QSLF R+V LG+ + L Q R P++
Sbjct: 654 AKQLILVGDHCQLGPVVMCKKAAK-AGLSQSLFERLVVLGIRPIRLQVQYRMHPAL 708
>D86988-1|BAA19664.2| 1151|Homo sapiens KIAA0221 protein.
Length = 1151
Score = 57.6 bits (133), Expect = 3e-08
Identities = 42/116 (36%), Positives = 61/116 (52%)
Frame = +1
Query: 52 LVKEAKIIAMTCTHAALKRSELVQMGFKYDNILMEESAQILEIETFIPLLLQNPQDGRSR 231
L+ A +I TC A R L +M F+ +IL++ES Q E E +P++L
Sbjct: 639 LLMNADVICCTCVGAGDPR--LAKMQFR--SILIDESTQATEPECMVPVVLG-------- 686
Query: 232 LKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSI 399
K+ I++GDH QL PVV K + QSLF R+V LG+ + L Q R P++
Sbjct: 687 AKQLILVGDHCQLGPVVMCKKAAK-AGLSQSLFERLVVLGIRPIRLQVQYRMHPAL 741
>BC039817-1|AAH39817.1| 1118|Homo sapiens UPF1 regulator of nonsense
transcripts homolog (yeast) protein.
Length = 1118
Score = 57.6 bits (133), Expect = 3e-08
Identities = 42/116 (36%), Positives = 61/116 (52%)
Frame = +1
Query: 52 LVKEAKIIAMTCTHAALKRSELVQMGFKYDNILMEESAQILEIETFIPLLLQNPQDGRSR 231
L+ A +I TC A R L +M F+ +IL++ES Q E E +P++L
Sbjct: 606 LLMNADVICCTCVGAGDPR--LAKMQFR--SILIDESTQATEPECMVPVVLG-------- 653
Query: 232 LKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSI 399
K+ I++GDH QL PVV K + QSLF R+V LG+ + L Q R P++
Sbjct: 654 AKQLILVGDHCQLGPVVMCKKAAK-AGLSQSLFERLVVLGIRPIRLQVQYRMHPAL 708
>AF074016-1|AAC26788.1| 1118|Homo sapiens nonsense-mediated mRNA
decay trans-acting factor protein.
Length = 1118
Score = 57.6 bits (133), Expect = 3e-08
Identities = 42/116 (36%), Positives = 61/116 (52%)
Frame = +1
Query: 52 LVKEAKIIAMTCTHAALKRSELVQMGFKYDNILMEESAQILEIETFIPLLLQNPQDGRSR 231
L+ A +I TC A R L +M F+ +IL++ES Q E E +P++L
Sbjct: 606 LLMNADVICCTCVGAGDPR--LAKMQFR--SILIDESTQATEPECMVPVVLG-------- 653
Query: 232 LKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSI 399
K+ I++GDH QL PVV K + QSLF R+V LG+ + L Q R P++
Sbjct: 654 AKQLILVGDHCQLGPVVMCKKAAK-AGLSQSLFERLVVLGIRPIRLQVQYRMHPAL 708
>AC003972-1|AAB94785.1| 1118|Homo sapiens pNORF1 protein.
Length = 1118
Score = 57.6 bits (133), Expect = 3e-08
Identities = 42/116 (36%), Positives = 61/116 (52%)
Frame = +1
Query: 52 LVKEAKIIAMTCTHAALKRSELVQMGFKYDNILMEESAQILEIETFIPLLLQNPQDGRSR 231
L+ A +I TC A R L +M F+ +IL++ES Q E E +P++L
Sbjct: 606 LLMNADVICCTCVGAGDPR--LAKMQFR--SILIDESTQATEPECMVPVVLG-------- 653
Query: 232 LKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSI 399
K+ I++GDH QL PVV K + QSLF R+V LG+ + L Q R P++
Sbjct: 654 AKQLILVGDHCQLGPVVMCKKAAK-AGLSQSLFERLVVLGIRPIRLQVQYRMHPAL 708
>BC106017-1|AAI06018.1| 867|Homo sapiens SETX protein protein.
Length = 867
Score = 50.0 bits (114), Expect = 7e-06
Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 14/136 (10%)
Frame = +1
Query: 37 RSKYLLVKEAKIIAMTCTHAA---LKRSELVQMGFKYDNILMEESAQILEIETFIPLLLQ 207
+++ +++ E+ II T + + L+ + Q G + ++++E+ Q EIET PL+
Sbjct: 329 KTQSIIILESHIICCTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEIETLTPLI-- 386
Query: 208 NPQDGRSRLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRL-----------GV 354
R + I++GD QLPP V +M Q+Y +QS+ R RL +
Sbjct: 387 ------HRCNKLILVGDPKQLPPTVISMKAQEY-GYDQSMMARFCRLLEENVEHNMISRL 439
Query: 355 PYVELDAQGRARPSIC 402
P ++L Q R P IC
Sbjct: 440 PILQLTVQYRMHPDIC 455
>BC078166-1|AAH78166.1| 917|Homo sapiens SETX protein protein.
Length = 917
Score = 50.0 bits (114), Expect = 7e-06
Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 14/136 (10%)
Frame = +1
Query: 37 RSKYLLVKEAKIIAMTCTHAA---LKRSELVQMGFKYDNILMEESAQILEIETFIPLLLQ 207
+++ +++ E+ II T + + L+ + Q G + ++++E+ Q EIET PL+
Sbjct: 379 KTQSIIILESHIICCTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEIETLTPLI-- 436
Query: 208 NPQDGRSRLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRL-----------GV 354
R + I++GD QLPP V +M Q+Y +QS+ R RL +
Sbjct: 437 ------HRCNKLILVGDPKQLPPTVISMKAQEY-GYDQSMMARFCRLLEENVEHNMISRL 489
Query: 355 PYVELDAQGRARPSIC 402
P ++L Q R P IC
Sbjct: 490 PILQLTVQYRMHPDIC 505
>BC032622-1|AAH32622.2| 1030|Homo sapiens SETX protein protein.
Length = 1030
Score = 50.0 bits (114), Expect = 7e-06
Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 14/136 (10%)
Frame = +1
Query: 37 RSKYLLVKEAKIIAMTCTHAA---LKRSELVQMGFKYDNILMEESAQILEIETFIPLLLQ 207
+++ +++ E+ II T + + L+ + Q G + ++++E+ Q EIET PL+
Sbjct: 492 KTQSIIILESHIICCTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEIETLTPLI-- 549
Query: 208 NPQDGRSRLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRL-----------GV 354
R + I++GD QLPP V +M Q+Y +QS+ R RL +
Sbjct: 550 ------HRCNKLILVGDPKQLPPTVISMKAQEY-GYDQSMMARFCRLLEENVEHNMISRL 602
Query: 355 PYVELDAQGRARPSIC 402
P ++L Q R P IC
Sbjct: 603 PILQLTVQYRMHPDIC 618
>BC032600-1|AAH32600.1| 828|Homo sapiens SETX protein protein.
Length = 828
Score = 50.0 bits (114), Expect = 7e-06
Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 14/136 (10%)
Frame = +1
Query: 37 RSKYLLVKEAKIIAMTCTHAA---LKRSELVQMGFKYDNILMEESAQILEIETFIPLLLQ 207
+++ +++ E+ II T + + L+ + Q G + ++++E+ Q EIET PL+
Sbjct: 290 KTQSIIILESHIICCTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEIETLTPLI-- 347
Query: 208 NPQDGRSRLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRL-----------GV 354
R + I++GD QLPP V +M Q+Y +QS+ R RL +
Sbjct: 348 ------HRCNKLILVGDPKQLPPTVISMKAQEY-GYDQSMMARFCRLLEENVEHNMISRL 400
Query: 355 PYVELDAQGRARPSIC 402
P ++L Q R P IC
Sbjct: 401 PILQLTVQYRMHPDIC 416
>AY362728-1|AAR13367.1| 2677|Homo sapiens ataxia/oculomotor apraxia
protein 2 protein.
Length = 2677
Score = 50.0 bits (114), Expect = 7e-06
Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 14/136 (10%)
Frame = +1
Query: 37 RSKYLLVKEAKIIAMTCTHAA---LKRSELVQMGFKYDNILMEESAQILEIETFIPLLLQ 207
+++ +++ E+ II T + + L+ + Q G + ++++E+ Q EIET PL+
Sbjct: 2139 KTQSIIILESHIICCTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEIETLTPLI-- 2196
Query: 208 NPQDGRSRLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRL-----------GV 354
R + I++GD QLPP V +M Q+Y +QS+ R RL +
Sbjct: 2197 ------HRCNKLILVGDPKQLPPTVISMKAQEY-GYDQSMMARFCRLLEENVEHNMISRL 2249
Query: 355 PYVELDAQGRARPSIC 402
P ++L Q R P IC
Sbjct: 2250 PILQLTVQYRMHPDIC 2265
>AL353701-2|CAM14151.1| 2677|Homo sapiens senataxin protein.
Length = 2677
Score = 50.0 bits (114), Expect = 7e-06
Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 14/136 (10%)
Frame = +1
Query: 37 RSKYLLVKEAKIIAMTCTHAA---LKRSELVQMGFKYDNILMEESAQILEIETFIPLLLQ 207
+++ +++ E+ II T + + L+ + Q G + ++++E+ Q EIET PL+
Sbjct: 2139 KTQSIIILESHIICCTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEIETLTPLI-- 2196
Query: 208 NPQDGRSRLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRL-----------GV 354
R + I++GD QLPP V +M Q+Y +QS+ R RL +
Sbjct: 2197 ------HRCNKLILVGDPKQLPPTVISMKAQEY-GYDQSMMARFCRLLEENVEHNMISRL 2249
Query: 355 PYVELDAQGRARPSIC 402
P ++L Q R P IC
Sbjct: 2250 PILQLTVQYRMHPDIC 2265
>AL159997-5|CAI40857.1| 948|Homo sapiens senataxin protein.
Length = 948
Score = 50.0 bits (114), Expect = 7e-06
Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 14/136 (10%)
Frame = +1
Query: 37 RSKYLLVKEAKIIAMTCTHAA---LKRSELVQMGFKYDNILMEESAQILEIETFIPLLLQ 207
+++ +++ E+ II T + + L+ + Q G + ++++E+ Q EIET PL+
Sbjct: 381 KTQSIIILESHIICCTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEIETLTPLI-- 438
Query: 208 NPQDGRSRLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRL-----------GV 354
R + I++GD QLPP V +M Q+Y +QS+ R RL +
Sbjct: 439 ------HRCNKLILVGDPKQLPPTVISMKAQEY-GYDQSMMARFCRLLEENVEHNMISRL 491
Query: 355 PYVELDAQGRARPSIC 402
P ++L Q R P IC
Sbjct: 492 PILQLTVQYRMHPDIC 507
>AL159997-2|CAI40854.1| 2677|Homo sapiens senataxin protein.
Length = 2677
Score = 50.0 bits (114), Expect = 7e-06
Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 14/136 (10%)
Frame = +1
Query: 37 RSKYLLVKEAKIIAMTCTHAA---LKRSELVQMGFKYDNILMEESAQILEIETFIPLLLQ 207
+++ +++ E+ II T + + L+ + Q G + ++++E+ Q EIET PL+
Sbjct: 2139 KTQSIIILESHIICCTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEIETLTPLI-- 2196
Query: 208 NPQDGRSRLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRL-----------GV 354
R + I++GD QLPP V +M Q+Y +QS+ R RL +
Sbjct: 2197 ------HRCNKLILVGDPKQLPPTVISMKAQEY-GYDQSMMARFCRLLEENVEHNMISRL 2249
Query: 355 PYVELDAQGRARPSIC 402
P ++L Q R P IC
Sbjct: 2250 PILQLTVQYRMHPDIC 2265
>AK001456-1|BAA91701.1| 828|Homo sapiens protein ( Homo sapiens
cDNA FLJ10594 fis, clone NT2RP2004689. ).
Length = 828
Score = 50.0 bits (114), Expect = 7e-06
Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 14/136 (10%)
Frame = +1
Query: 37 RSKYLLVKEAKIIAMTCTHAA---LKRSELVQMGFKYDNILMEESAQILEIETFIPLLLQ 207
+++ +++ E+ II T + + L+ + Q G + ++++E+ Q EIET PL+
Sbjct: 290 KTQSIIILESHIICCTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEIETLTPLI-- 347
Query: 208 NPQDGRSRLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRL-----------GV 354
R + I++GD QLPP V +M Q+Y +QS+ R RL +
Sbjct: 348 ------HRCNKLILVGDPKQLPPTVISMKAQEY-GYDQSMMARFCRLLEENVEHNMISRL 400
Query: 355 PYVELDAQGRARPSIC 402
P ++L Q R P IC
Sbjct: 401 PILQLTVQYRMHPDIC 416
>AB014525-1|BAA31600.2| 2663|Homo sapiens KIAA0625 protein protein.
Length = 2663
Score = 50.0 bits (114), Expect = 7e-06
Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 14/136 (10%)
Frame = +1
Query: 37 RSKYLLVKEAKIIAMTCTHAA---LKRSELVQMGFKYDNILMEESAQILEIETFIPLLLQ 207
+++ +++ E+ II T + + L+ + Q G + ++++E+ Q EIET PL+
Sbjct: 2125 KTQSIIILESHIICCTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEIETLTPLI-- 2182
Query: 208 NPQDGRSRLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRL-----------GV 354
R + I++GD QLPP V +M Q+Y +QS+ R RL +
Sbjct: 2183 ------HRCNKLILVGDPKQLPPTVISMKAQEY-GYDQSMMARFCRLLEENVEHNMISRL 2235
Query: 355 PYVELDAQGRARPSIC 402
P ++L Q R P IC
Sbjct: 2236 PILQLTVQYRMHPDIC 2251
>AK126054-1|BAC86416.1| 926|Homo sapiens protein ( Homo sapiens
cDNA FLJ44066 fis, clone TESTI4036909, weakly similar
to Regulator of nonsense transcripts 1. ).
Length = 926
Score = 48.0 bits (109), Expect = 3e-05
Identities = 29/116 (25%), Positives = 56/116 (48%)
Frame = +1
Query: 52 LVKEAKIIAMTCTHAALKRSELVQMGFKYDNILMEESAQILEIETFIPLLLQNPQDGRSR 231
L+K+ +++ +TC K+ ++++E +QI E + +P+ R
Sbjct: 601 LLKQVRVVGVTCAACPFP----CMNDLKFPVVVLDECSQITEPASLLPI-------ARFE 649
Query: 232 LKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSI 399
++ I++GD QLPP ++ +EQ+LF R+ +G + L Q R P+I
Sbjct: 650 CEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCLMGHKPILLRTQYRCHPAI 705
>BC150283-1|AAI50284.1| 2080|Homo sapiens peroxisomal
proliferator-activated receptor A interacting complex 285
protein.
Length = 2080
Score = 46.4 bits (105), Expect = 8e-05
Identities = 38/112 (33%), Positives = 57/112 (50%)
Frame = +1
Query: 67 KIIAMTCTHAALKRSELVQMGFKYDNILMEESAQILEIETFIPLLLQNPQDGRSRLKRWI 246
++I TC+ AA +++ + IL++E+ E ET IPL+ Q PQ ++ +
Sbjct: 1766 EVILCTCSCAASASLKILDVR----QILVDEAGMATEPETLIPLV-QFPQ-----AEKVV 1815
Query: 247 MIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSIC 402
++GDH QL PVVKN Q +++SLF R LD Q R IC
Sbjct: 1816 LLGDHKQLRPVVKNERLQN-LGLDRSLFERYHE---DAHMLDTQYRMHEGIC 1863
>AL121829-16|CAI95749.1| 2080|Homo sapiens RP4-697K14.7 protein.
Length = 2080
Score = 46.4 bits (105), Expect = 8e-05
Identities = 38/112 (33%), Positives = 57/112 (50%)
Frame = +1
Query: 67 KIIAMTCTHAALKRSELVQMGFKYDNILMEESAQILEIETFIPLLLQNPQDGRSRLKRWI 246
++I TC+ AA +++ + IL++E+ E ET IPL+ Q PQ ++ +
Sbjct: 1766 EVILCTCSCAASASLKILDVR----QILVDEAGMATEPETLIPLV-QFPQ-----AEKVV 1815
Query: 247 MIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSIC 402
++GDH QL PVVKN Q +++SLF R LD Q R IC
Sbjct: 1816 LLGDHKQLRPVVKNERLQN-LGLDRSLFERYHE---DAHMLDTQYRMHEGIC 1863
>AK074171-1|BAB84997.1| 1124|Homo sapiens FLJ00244 protein protein.
Length = 1124
Score = 46.4 bits (105), Expect = 8e-05
Identities = 38/112 (33%), Positives = 57/112 (50%)
Frame = +1
Query: 67 KIIAMTCTHAALKRSELVQMGFKYDNILMEESAQILEIETFIPLLLQNPQDGRSRLKRWI 246
++I TC+ AA +++ + IL++E+ E ET IPL+ Q PQ ++ +
Sbjct: 810 EVILCTCSCAASASLKILDVR----QILVDEAGMATEPETLIPLV-QFPQ-----AEKVV 859
Query: 247 MIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSIC 402
++GDH QL PVVKN Q +++SLF R LD Q R IC
Sbjct: 860 LLGDHKQLRPVVKNERLQN-LGLDRSLFERYHE---DAHMLDTQYRMHEGIC 907
>AK055611-1|BAB70969.1| 413|Homo sapiens protein ( Homo sapiens
cDNA FLJ31049 fis, clone HSYRA2000510, weakly similar to
NAM7 PROTEIN. ).
Length = 413
Score = 46.4 bits (105), Expect = 8e-05
Identities = 38/112 (33%), Positives = 57/112 (50%)
Frame = +1
Query: 67 KIIAMTCTHAALKRSELVQMGFKYDNILMEESAQILEIETFIPLLLQNPQDGRSRLKRWI 246
++I TC+ AA +++ + IL++E+ E ET IPL+ Q PQ ++ +
Sbjct: 99 EVILCTCSCAASASLKILDVR----QILVDEAGMATEPETLIPLV-QFPQ-----AEKVV 148
Query: 247 MIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSIC 402
++GDH QL PVVKN Q +++SLF R LD Q R IC
Sbjct: 149 LLGDHKQLRPVVKNERLQN-LGLDRSLFERYHE---DAHMLDTQYRMHEGIC 196
>AF517673-1|AAM74197.1| 2080|Homo sapiens peroxisomal
proliferator-activated receptor A interacting complex-285
peptide protein.
Length = 2080
Score = 46.4 bits (105), Expect = 8e-05
Identities = 38/112 (33%), Positives = 57/112 (50%)
Frame = +1
Query: 67 KIIAMTCTHAALKRSELVQMGFKYDNILMEESAQILEIETFIPLLLQNPQDGRSRLKRWI 246
++I TC+ AA +++ + IL++E+ E ET IPL+ Q PQ ++ +
Sbjct: 1766 EVILCTCSCAASASLKILDVR----QILVDEAGMATEPETLIPLV-QFPQ-----AEKVV 1815
Query: 247 MIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSIC 402
++GDH QL PVVKN Q +++SLF R LD Q R IC
Sbjct: 1816 LLGDHKQLRPVVKNERLQN-LGLDRSLFERYHE---DAHMLDTQYRMHEGIC 1863
>AB201715-1|BAE46995.1| 2649|Homo sapiens PPAR gamma DBD-interacting
protein1 beta protein.
Length = 2649
Score = 46.4 bits (105), Expect = 8e-05
Identities = 38/112 (33%), Positives = 57/112 (50%)
Frame = +1
Query: 67 KIIAMTCTHAALKRSELVQMGFKYDNILMEESAQILEIETFIPLLLQNPQDGRSRLKRWI 246
++I TC+ AA +++ + IL++E+ E ET IPL+ Q PQ ++ +
Sbjct: 2335 EVILCTCSCAASASLKILDVR----QILVDEAGMATEPETLIPLV-QFPQAEKA-----V 2384
Query: 247 MIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSIC 402
++GDH QL PVVKN Q +++SLF R LD Q R IC
Sbjct: 2385 LLGDHKQLRPVVKNERLQN-LGLDRSLFERYHE---DAHMLDTQYRMHEGIC 2432
>AB051556-1|BAB21860.2| 2114|Homo sapiens KIAA1769 protein protein.
Length = 2114
Score = 46.4 bits (105), Expect = 8e-05
Identities = 38/112 (33%), Positives = 57/112 (50%)
Frame = +1
Query: 67 KIIAMTCTHAALKRSELVQMGFKYDNILMEESAQILEIETFIPLLLQNPQDGRSRLKRWI 246
++I TC+ AA +++ + IL++E+ E ET IPL+ Q PQ ++ +
Sbjct: 1800 EVILCTCSCAASASLKILDVR----QILVDEAGMATEPETLIPLV-QFPQ-----AEKVV 1849
Query: 247 MIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSIC 402
++GDH QL PVVKN Q +++SLF R LD Q R IC
Sbjct: 1850 LLGDHKQLRPVVKNERLQN-LGLDRSLFERYHE---DAHMLDTQYRMHEGIC 1897
>D42046-1|BAA07647.1| 1077|Homo sapiens KIAA0083 protein.
Length = 1077
Score = 41.1 bits (92), Expect = 0.003
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +1
Query: 235 KRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSICNL 408
+R++++GDH QLPP+V N + M +SLF R+ + V+L Q R I +L
Sbjct: 797 RRFVLVGDHQQLPPLVLNRE-ARALGMSESLFKRLEQNKSAVVQLTVQYRMNSKIMSL 853
>BC053574-1|AAH53574.1| 494|Homo sapiens DNA2L protein protein.
Length = 494
Score = 41.1 bits (92), Expect = 0.003
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +1
Query: 235 KRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSICNL 408
+R++++GDH QLPP+V N + M +SLF R+ + V+L Q R I +L
Sbjct: 214 RRFVLVGDHQQLPPLVLNRE-ARALGMSESLFKRLEQNKSAVVQLTVQYRMNSKIMSL 270
>BC041115-1|AAH41115.1| 435|Homo sapiens DNA2L protein protein.
Length = 435
Score = 41.1 bits (92), Expect = 0.003
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +1
Query: 235 KRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSICNL 408
+R++++GDH QLPP+V N + M +SLF R+ + V+L Q R I +L
Sbjct: 155 RRFVLVGDHQQLPPLVLNRE-ARALGMSESLFKRLEQNKSAVVQLTVQYRMNSKIMSL 211
>BC028188-1|AAH28188.1| 378|Homo sapiens Unknown (protein for
IMAGE:4385301) protein.
Length = 378
Score = 41.1 bits (92), Expect = 0.003
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +1
Query: 235 KRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSICNL 408
+R++++GDH QLPP+V N + M +SLF R+ + V+L Q R I +L
Sbjct: 105 RRFVLVGDHQQLPPLVLNRE-ARALGMSESLFKRLEQNKSAVVQLTVQYRMNSKIMSL 161
>AL136233-5|CAI17238.1| 1040|Homo sapiens DNA2 DNA replication
helicase 2-like (yeast) protein.
Length = 1040
Score = 41.1 bits (92), Expect = 0.003
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +1
Query: 235 KRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSICNL 408
+R++++GDH QLPP+V N + M +SLF R+ + V+L Q R I +L
Sbjct: 780 RRFVLVGDHQQLPPLVLNRE-ARALGMSESLFKRLEQNKSAVVQLTVQYRMNSKIMSL 836
>AL136233-4|CAI17237.1| 374|Homo sapiens DNA2 DNA replication
helicase 2-like (yeast) protein.
Length = 374
Score = 41.1 bits (92), Expect = 0.003
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +1
Query: 235 KRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSICNL 408
+R++++GDH QLPP+V N + M +SLF R+ + V+L Q R I +L
Sbjct: 101 RRFVLVGDHQQLPPLVLNRE-ARALGMSESLFKRLEQNKSAVVQLTVQYRMNSKIMSL 157
>L24544-1|AAA70430.1| 993|Homo sapiens DNA helicase protein.
Length = 993
Score = 34.3 bits (75), Expect = 0.36
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +1
Query: 136 YDNILMEESAQILEIETFIPLLLQNPQDGRSRLKRWIMIGDHHQLPP 276
+D ++++E AQ LE +IPLL + ++ I+ GDH QLPP
Sbjct: 369 FDVVVIDECAQALEASCWIPLL---------KARKCILAGDHKQLPP 406
>L14754-1|AAA53082.1| 993|Homo sapiens DNA-binding protein protein.
Length = 993
Score = 34.3 bits (75), Expect = 0.36
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +1
Query: 136 YDNILMEESAQILEIETFIPLLLQNPQDGRSRLKRWIMIGDHHQLPP 276
+D ++++E AQ LE +IPLL + ++ I+ GDH QLPP
Sbjct: 369 FDVVVIDECAQALEASCWIPLL---------KARKCILAGDHKQLPP 406
>BC105090-1|AAI05091.1| 993|Homo sapiens immunoglobulin mu binding
protein 2 protein.
Length = 993
Score = 34.3 bits (75), Expect = 0.36
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +1
Query: 136 YDNILMEESAQILEIETFIPLLLQNPQDGRSRLKRWIMIGDHHQLPP 276
+D ++++E AQ LE +IPLL + ++ I+ GDH QLPP
Sbjct: 369 FDVVVIDECAQALEASCWIPLL---------KARKCILAGDHKQLPP 406
>BC105088-1|AAI05089.1| 993|Homo sapiens immunoglobulin mu binding
protein 2 protein.
Length = 993
Score = 34.3 bits (75), Expect = 0.36
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +1
Query: 136 YDNILMEESAQILEIETFIPLLLQNPQDGRSRLKRWIMIGDHHQLPP 276
+D ++++E AQ LE +IPLL + ++ I+ GDH QLPP
Sbjct: 369 FDVVVIDECAQALEASCWIPLL---------KARKCILAGDHKQLPP 406
>BC025299-1|AAH25299.1| 868|Homo sapiens Unknown (protein for
IMAGE:4890919) protein.
Length = 868
Score = 34.3 bits (75), Expect = 0.36
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +1
Query: 136 YDNILMEESAQILEIETFIPLLLQNPQDGRSRLKRWIMIGDHHQLPP 276
+D ++++E AQ LE +IPLL + ++ I+ GDH QLPP
Sbjct: 369 FDVVVIDECAQALEASCWIPLL---------KARKCILAGDHKQLPP 406
>BC000290-1|AAH00290.1| 868|Homo sapiens IGHMBP2 protein protein.
Length = 868
Score = 34.3 bits (75), Expect = 0.36
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +1
Query: 136 YDNILMEESAQILEIETFIPLLLQNPQDGRSRLKRWIMIGDHHQLPP 276
+D ++++E AQ LE +IPLL + ++ I+ GDH QLPP
Sbjct: 369 FDVVVIDECAQALEASCWIPLL---------KARKCILAGDHKQLPP 406
>AK128468-1|BAC87454.1| 187|Homo sapiens protein ( Homo sapiens
cDNA FLJ46611 fis, clone TKIDN2010602. ).
Length = 187
Score = 34.3 bits (75), Expect = 0.36
Identities = 22/58 (37%), Positives = 28/58 (48%)
Frame = +3
Query: 177 DRDVHTAAAAESAGRQVPAEALDHDRRPPPAAPGRQEHGVPEVLQHGTEPVHQNGQTG 350
DRDV A GR+ PA A + R PAA +E + EV + EPV + G G
Sbjct: 19 DRDVPQAEVGR--GRREPAPAQPEEARESPAAAAAREARMAEVARLLGEPVDEEGPEG 74
>AC007192-1|AAD22670.1| 681|Homo sapiens KIAA0561 protein [AA
628-1308] protein.
Length = 681
Score = 33.9 bits (74), Expect = 0.48
Identities = 29/91 (31%), Positives = 35/91 (38%), Gaps = 3/91 (3%)
Frame = +3
Query: 228 PAEALDHDRRPPPAAPGRQEHGVPEVLQHGTEPVHQNG---QTGCSVRGTGRTGSS*TQH 398
P D PP A+P P H T P +G + G TGR S T
Sbjct: 499 PDVPADTTASPPSASPSSSSPASPAAAGH-TRPSSLHGLAAKLGPPRPKTGRRKS--TSS 555
Query: 399 LQPVPLALPGAGRPVPRDAAPGVPRRQRGPA 491
+ P PLA P P PR +P +P PA
Sbjct: 556 IPPSPLACPPISAPPPRSPSP-LPGHPPAPA 585
>AB011133-1|BAA25487.1| 1308|Homo sapiens KIAA0561 protein protein.
Length = 1308
Score = 33.9 bits (74), Expect = 0.48
Identities = 29/91 (31%), Positives = 35/91 (38%), Gaps = 3/91 (3%)
Frame = +3
Query: 228 PAEALDHDRRPPPAAPGRQEHGVPEVLQHGTEPVHQNG---QTGCSVRGTGRTGSS*TQH 398
P D PP A+P P H T P +G + G TGR S T
Sbjct: 1126 PDVPADTTASPPSASPSSSSPASPAAAGH-TRPSSLHGLAAKLGPPRPKTGRRKS--TSS 1182
Query: 399 LQPVPLALPGAGRPVPRDAAPGVPRRQRGPA 491
+ P PLA P P PR +P +P PA
Sbjct: 1183 IPPSPLACPPISAPPPRSPSP-LPGHPPAPA 1212
>BC125271-1|AAI25272.1| 641|Homo sapiens PCLO protein protein.
Length = 641
Score = 32.3 bits (70), Expect = 1.5
Identities = 30/102 (29%), Positives = 42/102 (41%), Gaps = 15/102 (14%)
Frame = +3
Query: 222 QVPAEALDHDRRPPPAAPGRQEHGVPEVL--QHGTE-----------PVHQNG--QTGCS 356
Q P ++P PA P Q+ G P+ L Q G + PV Q G +
Sbjct: 373 QPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQ 432
Query: 357 VRGTGRTGSS*TQHLQPVPLALPGAGRPVPRDAAPGVPRRQR 482
G G+T + T +P P LPG +P P+ P P Q+
Sbjct: 433 QAGPGKTSAQQTGPTKP-PSQLPGPAKPPPQQPGPAKPPPQQ 473
>BC122565-1|AAI22566.1| 641|Homo sapiens PCLO protein protein.
Length = 641
Score = 32.3 bits (70), Expect = 1.5
Identities = 30/102 (29%), Positives = 42/102 (41%), Gaps = 15/102 (14%)
Frame = +3
Query: 222 QVPAEALDHDRRPPPAAPGRQEHGVPEVL--QHGTE-----------PVHQNG--QTGCS 356
Q P ++P PA P Q+ G P+ L Q G + PV Q G +
Sbjct: 373 QPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQ 432
Query: 357 VRGTGRTGSS*TQHLQPVPLALPGAGRPVPRDAAPGVPRRQR 482
G G+T + T +P P LPG +P P+ P P Q+
Sbjct: 433 QAGPGKTSAQQTGPTKP-PSQLPGPAKPPPQQPGPAKPPPQQ 473
>X69910-1|CAA49535.2| 602|Homo sapiens P63 protein protein.
Length = 602
Score = 31.5 bits (68), Expect = 2.5
Identities = 20/75 (26%), Positives = 34/75 (45%)
Frame = +3
Query: 162 SSNPRDRDVHTAAAAESAGRQVPAEALDHDRRPPPAAPGRQEHGVPEVLQHGTEPVHQNG 341
+++P ++ H + A+ ++ P + PPP AP Q+H P+ QH H G
Sbjct: 15 AASPSEKGAHPSGGADDVAKKPPPAP---QQPPPPPAPHPQQH--PQ--QHPQNQAHGKG 67
Query: 342 QTGCSVRGTGRTGSS 386
G G++ SS
Sbjct: 68 GHRGGGGGGGKSSSS 82
>BC082972-1|AAH82972.1| 602|Homo sapiens cytoskeleton-associated
protein 4 protein.
Length = 602
Score = 31.5 bits (68), Expect = 2.5
Identities = 20/75 (26%), Positives = 34/75 (45%)
Frame = +3
Query: 162 SSNPRDRDVHTAAAAESAGRQVPAEALDHDRRPPPAAPGRQEHGVPEVLQHGTEPVHQNG 341
+++P ++ H + A+ ++ P + PPP AP Q+H P+ QH H G
Sbjct: 15 AASPSEKGAHPSGGADDVAKKPPPAP---QQPPPPPAPHPQQH--PQ--QHPQNQAHGKG 67
Query: 342 QTGCSVRGTGRTGSS 386
G G++ SS
Sbjct: 68 GHRGGGGGGGKSSSS 82
>AK223563-1|BAD97283.1| 602|Homo sapiens cytoskeleton-associated
protein 4 variant protein.
Length = 602
Score = 31.5 bits (68), Expect = 2.5
Identities = 20/75 (26%), Positives = 34/75 (45%)
Frame = +3
Query: 162 SSNPRDRDVHTAAAAESAGRQVPAEALDHDRRPPPAAPGRQEHGVPEVLQHGTEPVHQNG 341
+++P ++ H + A+ ++ P + PPP AP Q+H P+ QH H G
Sbjct: 15 AASPSEKGAHPSGGADDVAKKPPPAP---QQPPPPPAPHPQQH--PQ--QHPRNQAHGKG 67
Query: 342 QTGCSVRGTGRTGSS 386
G G++ SS
Sbjct: 68 GHRGGGGGGGKSSSS 82
>S74683-1|AAB32387.1| 327|Homo sapiens ADP-ribosyltransferase
protein.
Length = 327
Score = 30.7 bits (66), Expect = 4.5
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Frame = +3
Query: 144 HTDGGISSNPRDRDVHTAAAAESAGRQV--PAEALDHDRRPPPAAPGRQEHGVPEVLQHG 317
HT+ +N D T A+++ RQ P +L R PP R EHGV +
Sbjct: 66 HTE--FQANQVYADSWTLASSQWQERQARWPEWSLSPTRPSPPPLGFRDEHGVALLAYTA 123
Query: 318 TEPVHQNGQTGCSVRGTGRTGSS*TQH 398
P+H+ + +VR GR+ + H
Sbjct: 124 NSPLHK--EFNAAVREAGRSRAHYLHH 148
>DQ083949-1|AAY68214.1| 292|Homo sapiens aquaporin 3 protein.
Length = 292
Score = 30.7 bits (66), Expect = 4.5
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 299 WNAMFLTTGGSWWWSPIM 246
W + TTG WWW PI+
Sbjct: 231 WGSAVFTTGQHWWWVPIV 248
>CR542025-1|CAG46822.1| 292|Homo sapiens AQP3 protein.
Length = 292
Score = 30.7 bits (66), Expect = 4.5
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 299 WNAMFLTTGGSWWWSPIM 246
W + TTG WWW PI+
Sbjct: 231 WGSAVFTTGQHWWWVPIV 248
>CR541991-1|CAG46788.1| 292|Homo sapiens AQP3 protein.
Length = 292
Score = 30.7 bits (66), Expect = 4.5
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 299 WNAMFLTTGGSWWWSPIM 246
W + TTG WWW PI+
Sbjct: 231 WGSAVFTTGQHWWWVPIV 248
>BT007199-1|AAP35863.1| 292|Homo sapiens aquaporin 3 protein.
Length = 292
Score = 30.7 bits (66), Expect = 4.5
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 299 WNAMFLTTGGSWWWSPIM 246
W + TTG WWW PI+
Sbjct: 231 WGSAVFTTGQHWWWVPIV 248
>BC111729-1|AAI11730.1| 327|Homo sapiens ADP-ribosyltransferase 1
protein.
Length = 327
Score = 30.7 bits (66), Expect = 4.5
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Frame = +3
Query: 144 HTDGGISSNPRDRDVHTAAAAESAGRQV--PAEALDHDRRPPPAAPGRQEHGVPEVLQHG 317
HT+ +N D T A+++ RQ P +L R PP R EHGV +
Sbjct: 66 HTE--FQANQVYADSWTLASSQWQERQARWPEWSLSPTRPSPPPLGFRDEHGVALLAYTA 123
Query: 318 TEPVHQNGQTGCSVRGTGRTGSS*TQH 398
P+H+ + +VR GR+ + H
Sbjct: 124 NSPLHK--EFNAAVREAGRSRAHYLHH 148
>BC069102-1|AAH69102.1| 327|Homo sapiens ADP-ribosyltransferase 1
protein.
Length = 327
Score = 30.7 bits (66), Expect = 4.5
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Frame = +3
Query: 144 HTDGGISSNPRDRDVHTAAAAESAGRQV--PAEALDHDRRPPPAAPGRQEHGVPEVLQHG 317
HT+ +N D T A+++ RQ P +L R PP R EHGV +
Sbjct: 66 HTE--FQANQVYADSWTLASSQWQERQARWPEWSLSPTRPSPPPLGFRDEHGVALLAYTA 123
Query: 318 TEPVHQNGQTGCSVRGTGRTGSS*TQH 398
P+H+ + +VR GR+ + H
Sbjct: 124 NSPLHK--EFNAAVREAGRSRAHYLHH 148
>BC013566-1|AAH13566.1| 292|Homo sapiens aquaporin 3 (Gill blood
group) protein.
Length = 292
Score = 30.7 bits (66), Expect = 4.5
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 299 WNAMFLTTGGSWWWSPIM 246
W + TTG WWW PI+
Sbjct: 231 WGSAVFTTGQHWWWVPIV 248
>AL356218-9|CAI13311.1| 292|Homo sapiens aquaporin 3 (Gill blood
group) protein.
Length = 292
Score = 30.7 bits (66), Expect = 4.5
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 299 WNAMFLTTGGSWWWSPIM 246
W + TTG WWW PI+
Sbjct: 231 WGSAVFTTGQHWWWVPIV 248
>AB001325-1|BAA19237.1| 292|Homo sapiens aquaporin 3 protein.
Length = 292
Score = 30.7 bits (66), Expect = 4.5
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 299 WNAMFLTTGGSWWWSPIM 246
W + TTG WWW PI+
Sbjct: 231 WGSAVFTTGQHWWWVPIV 248
>BC042011-1|AAH42011.1| 558|Homo sapiens CASKIN1 protein protein.
Length = 558
Score = 30.3 bits (65), Expect = 5.9
Identities = 21/81 (25%), Positives = 31/81 (38%), Gaps = 2/81 (2%)
Frame = +3
Query: 252 RRPPPAAPGRQEHGVPEVLQHGTEPVHQNGQTGCSVRGTG--RTGSS*TQHLQPVPLALP 425
R P PG+ +P H T P S + G + T ++P P LP
Sbjct: 436 RASVPPVPGKPRQVLPPGTSHFTPPQTPTKTRPGSPQALGGPHGPAPATAEVKPTPQLLP 495
Query: 426 GAGRPVPRDAAPGVPRRQRGP 488
RP+ + P P ++ GP
Sbjct: 496 PTERPMSPRSLPQSPTQRTGP 516
>BC034988-1|AAH34988.1| 1036|Homo sapiens ULK2 protein protein.
Length = 1036
Score = 30.3 bits (65), Expect = 5.9
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 6/95 (6%)
Frame = +3
Query: 210 SAGRQVPAEALDHDRR-PPPAAPGRQEHGVPEVLQ-HGTEPVHQN----GQTGCSVRGTG 371
+AGR+ E L + P +P + +P Q + + QN +G +V G+
Sbjct: 372 TAGRRASNEFLVCGGQCQPTVSPHSETAPIPVPTQIRNYQRIEQNLTSTASSGTNVHGSP 431
Query: 372 RTGSS*TQHLQPVPLALPGAGRPVPRDAAPGVPRR 476
R+ + P+ PG+ PVP D A V RR
Sbjct: 432 RSAVVRRSNTSPMGFLRPGSCSPVPADTAQTVGRR 466
>BC028048-1|AAH28048.1| 800|Homo sapiens leukocyte receptor cluster
(LRC) member 8 protein.
Length = 800
Score = 30.3 bits (65), Expect = 5.9
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +3
Query: 207 ESAGRQVPAEALDHDRRPPPAAPGRQEHGVPEVLQHGTEPVHQNGQTG 350
ES Q P + L + P P+ P H + Q GT P Q+ Q G
Sbjct: 150 ESMSYQAPPQQLPSAQPPQPSNPPHGAHTLNSGPQPGTAPATQHSQAG 197
>AB067519-1|BAB67825.1| 795|Homo sapiens KIAA1932 protein protein.
Length = 795
Score = 30.3 bits (65), Expect = 5.9
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +3
Query: 207 ESAGRQVPAEALDHDRRPPPAAPGRQEHGVPEVLQHGTEPVHQNGQTG 350
ES Q P + L + P P+ P H + Q GT P Q+ Q G
Sbjct: 129 ESMSYQAPPQQLPSAQPPQPSNPPHGAHTLNSGPQPGTAPATQHSQAG 176
>AB014523-1|BAA31598.2| 1100|Homo sapiens KIAA0623 protein protein.
Length = 1100
Score = 30.3 bits (65), Expect = 5.9
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 6/95 (6%)
Frame = +3
Query: 210 SAGRQVPAEALDHDRR-PPPAAPGRQEHGVPEVLQ-HGTEPVHQN----GQTGCSVRGTG 371
+AGR+ E L + P +P + +P Q + + QN +G +V G+
Sbjct: 436 TAGRRASNEFLVCGGQCQPTVSPHSETAPIPVPTQIRNYQRIEQNLTSTASSGTNVHGSP 495
Query: 372 RTGSS*TQHLQPVPLALPGAGRPVPRDAAPGVPRR 476
R+ + P+ PG+ PVP D A V RR
Sbjct: 496 RSAVVRRSNTSPMGFLRPGSCSPVPADTAQTVGRR 530
>BC106040-1|AAI06041.1| 135|Homo sapiens MSTP150 protein.
Length = 135
Score = 29.9 bits (64), Expect = 7.8
Identities = 25/75 (33%), Positives = 31/75 (41%)
Frame = +3
Query: 261 PPAAPGRQEHGVPEVLQHGTEPVHQNGQTGCSVRGTGRTGSS*TQHLQPVPLALPGAGRP 440
P + P +PE GT + + C GTGR+G Q P P A PG
Sbjct: 19 PWSLPSLAGSFLPERSPQGT--LEEELSWSCRGPGTGRSGGGPQQPRIPEPAARPGRSCA 76
Query: 441 VPRDAAPGVPRRQRG 485
+P PG RR RG
Sbjct: 77 LP---PPGA-RRSRG 87
>BC101840-1|AAI01841.1| 135|Homo sapiens MSTP150 protein.
Length = 135
Score = 29.9 bits (64), Expect = 7.8
Identities = 25/75 (33%), Positives = 31/75 (41%)
Frame = +3
Query: 261 PPAAPGRQEHGVPEVLQHGTEPVHQNGQTGCSVRGTGRTGSS*TQHLQPVPLALPGAGRP 440
P + P +PE GT + + C GTGR+G Q P P A PG
Sbjct: 19 PWSLPSLAGSFLPERSPQGT--LEEELSWSCRGPGTGRSGGGPQQPRIPEPAARPGRSCA 76
Query: 441 VPRDAAPGVPRRQRG 485
+P PG RR RG
Sbjct: 77 LP---PPGA-RRSRG 87
>BC101838-1|AAI01839.1| 135|Homo sapiens MSTP150 protein.
Length = 135
Score = 29.9 bits (64), Expect = 7.8
Identities = 25/75 (33%), Positives = 31/75 (41%)
Frame = +3
Query: 261 PPAAPGRQEHGVPEVLQHGTEPVHQNGQTGCSVRGTGRTGSS*TQHLQPVPLALPGAGRP 440
P + P +PE GT + + C GTGR+G Q P P A PG
Sbjct: 19 PWSLPSLAGSFLPERSPQGT--LEEELSWSCRGPGTGRSGGGPQQPRIPEPAARPGRSCA 76
Query: 441 VPRDAAPGVPRRQRG 485
+P PG RR RG
Sbjct: 77 LP---PPGA-RRSRG 87
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,665,035
Number of Sequences: 237096
Number of extensions: 2157361
Number of successful extensions: 8550
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 7598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8495
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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