Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0110
(631 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g38770.1 68415.m04760 expressed protein 324 2e-89
At5g47010.1 68418.m05794 RNA helicase, putative similar to type ... 60 2e-09
At1g16800.1 68414.m02018 tRNA-splicing endonuclease positive eff... 56 1e-08
At2g19120.1 68415.m02232 tRNA-splicing endonuclease positive eff... 49 3e-06
At4g30100.1 68417.m04280 tRNA-splicing endonuclease positive eff... 46 2e-05
At1g65810.1 68414.m07468 tRNA-splicing endonuclease positive eff... 46 2e-05
At5g52090.1 68418.m06466 tRNA-splicing endonuclease positive eff... 45 4e-05
At5g37150.1 68418.m04460 tRNA-splicing endonuclease positive eff... 45 4e-05
At5g37030.1 68418.m04441 tRNA-splicing endonuclease positive eff... 45 5e-05
At4g15570.1 68417.m02379 tRNA-splicing endonuclease positive eff... 44 6e-05
At5g37160.1 68418.m04461 tRNA-splicing endonuclease positive eff... 42 3e-04
At4g05540.1 68417.m00843 tRNA-splicing endonuclease positive eff... 42 3e-04
At5g37140.1 68418.m04458 tRNA-splicing endonuclease positive eff... 41 6e-04
At2g03270.1 68415.m00280 DNA-binding protein, putative similar t... 40 0.001
At1g65780.1 68414.m07465 tRNA-splicing endonuclease positive eff... 38 0.004
At1g08840.1 68414.m00984 DNA replication helicase, putative simi... 34 0.068
At5g62790.1 68418.m07882 1-deoxy-D-xylulose 5-phosphate reductoi... 29 2.5
At2g40820.1 68415.m05038 proline-rich family protein contains pr... 29 3.4
At1g76360.1 68414.m08872 protein kinase, putative similar to pro... 29 3.4
At4g15396.1 68417.m02353 cytochrome P450-related similar to Cyto... 28 5.9
At1g50040.1 68414.m05615 expressed protein 28 5.9
At1g34355.1 68414.m04265 forkhead-associated domain-containing p... 28 5.9
At1g03390.1 68414.m00319 transferase family protein similar to a... 28 5.9
At5g29020.1 68418.m03592 hypothetical protein 27 7.8
At3g61850.2 68416.m06946 Dof zinc finger protein DAG1 / Dof affe... 27 7.8
At3g61850.1 68416.m06945 Dof zinc finger protein DAG1 / Dof affe... 27 7.8
At2g24310.1 68415.m02906 expressed protein 27 7.8
>At2g38770.1 68415.m04760 expressed protein
Length = 1509
Score = 324 bits (797), Expect = 2e-89
Identities = 145/209 (69%), Positives = 179/209 (85%)
Frame = +1
Query: 4 RAFELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRSELVQMGFKYDNILMEESAQILEIE 183
RAFELL+S DR+ YL+ K+AKI+AMTCTHAALKR + +Q+GFKYDN+LMEESAQILEIE
Sbjct: 1073 RAFELLKSTADRANYLMTKQAKIVAMTCTHAALKRRDFLQLGFKYDNLLMEESAQILEIE 1132
Query: 184 TFIPLLLQNPQDGRSRLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYV 363
TFIP+LLQ +DG +RLKR I+IGDHHQLPPVVKNMAFQKY +M+QSLFTR VRLG+PY+
Sbjct: 1133 TFIPMLLQRQEDGHARLKRCILIGDHHQLPPVVKNMAFQKYSHMDQSLFTRFVRLGIPYI 1192
Query: 364 ELDAQGRARPSICNLYRWRYRALGDLCHVTQLPEYRAANAGLRHDFQLVNVDDFNGFGET 543
EL+AQGRARPS+ LY WRYR LGDL V + P ++ ANAG +++QLVNV D+ G GE+
Sbjct: 1193 ELNAQGRARPSLAKLYNWRYRDLGDLSIVKEAPIFQRANAGFSYEYQLVNVPDYEGRGES 1252
Query: 544 EPSPYFYQNLAEAEYVVAVFMYMRLIGWP 630
PSP+FYQN EAEY+V+V++YMRL+G+P
Sbjct: 1253 TPSPWFYQNQGEAEYIVSVYIYMRLLGYP 1281
>At5g47010.1 68418.m05794 RNA helicase, putative similar to type 1
RNA helicase pNORF1 [Homo sapiens] GI:1885356
Length = 1254
Score = 59.7 bits (138), Expect = 2e-09
Identities = 38/116 (32%), Positives = 61/116 (52%)
Frame = +1
Query: 52 LVKEAKIIAMTCTHAALKRSELVQMGFKYDNILMEESAQILEIETFIPLLLQNPQDGRSR 231
+ + A +I TC AA +L F++ +L++ES Q E E IPL+L
Sbjct: 626 ITQSADVICCTCVGAA----DLRLSNFRFRQVLIDESTQATEPECLIPLVLG-------- 673
Query: 232 LKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSI 399
+K+ +++GDH QL PV+ + + QSLF R+V LG+ + L Q R P++
Sbjct: 674 VKQVVLVGDHCQLGPVIMCKKAAR-AGLAQSLFERLVTLGIKPIRLQVQYRMHPAL 728
>At1g16800.1 68414.m02018 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 1939
Score = 56.4 bits (130), Expect = 1e-08
Identities = 35/89 (39%), Positives = 49/89 (55%)
Frame = +1
Query: 136 YDNILMEESAQILEIETFIPLLLQNPQDGRSRLKRWIMIGDHHQLPPVVKNMAFQKYCNM 315
+D ++++E+AQ LE T IPL L +SR + IM+GD QLP V + K+
Sbjct: 1429 FDAVVIDEAAQALEPATLIPLQLL-----KSRGTKCIMVGDPKQLPATVLSNVASKFL-Y 1482
Query: 316 EQSLFTRMVRLGVPYVELDAQGRARPSIC 402
E S+F R+ R G P + L Q R P IC
Sbjct: 1483 ECSMFERLQRAGYPILMLTQQYRMHPEIC 1511
>At2g19120.1 68415.m02232 tRNA-splicing endonuclease positive
effector-related similar to Endonuclease sen1
(Swiss-Prot:Q92355) [Schizosaccharomyces pombe]; similar
to tRNA-splicing endonuclease positive effector
(Swiss-Prot:Q00416) [Saccharomyces cerevisiae]
Length = 1090
Score = 48.8 bits (111), Expect = 3e-06
Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 2/203 (0%)
Frame = +1
Query: 13 ELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRSELVQMGFKYDNILMEESAQILEIETFI 192
E R+ L+ S EA+I+ T + + K + GF D ++++E+AQ E+
Sbjct: 739 EEARASLEAS---FANEAEIVFTTVSSSGRKLFSRLTHGF--DMVVIDEAAQASEVGVLP 793
Query: 193 PLLLQNPQDGRSRLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELD 372
PL L G +R +++GD QLP V + A +SLF R G P + L
Sbjct: 794 PLAL-----GAARC---VLVGDPQQLPATVISKAAGTLL-YSRSLFERFQLAGCPTLLLT 844
Query: 373 AQGRARPSICNL-YRWRYRA-LGDLCHVTQLPEYRAANAGLRHDFQLVNVDDFNGFGETE 546
Q R P I + R+ Y+ L D ++ P+ + + N+ +G
Sbjct: 845 VQYRMHPQIRDFPSRYFYQGRLKDSESISSAPDEIYYKDPVLRPYLFFNIS--HGRESHR 902
Query: 547 PSPYFYQNLAEAEYVVAVFMYMR 615
Y+N+ EA + V V+M+++
Sbjct: 903 GGSVSYENVDEARFCVGVYMHLQ 925
>At4g30100.1 68417.m04280 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 1311
Score = 46.4 bits (105), Expect = 2e-05
Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 2/203 (0%)
Frame = +1
Query: 13 ELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRSELVQMGFKYDNILMEESAQILEIETFI 192
E R+ L+ S EA+I+ T + + K + GF D ++++E+AQ E+
Sbjct: 902 EEARASLEAS---FANEAEIVFTTVSSSGRKLFSRLTHGF--DMVVIDEAAQASEVGVLP 956
Query: 193 PLLLQNPQDGRSRLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELD 372
PL L G +R +++GD QLP V + A +SLF R G P + L
Sbjct: 957 PLAL-----GAARC---VLVGDPQQLPATVISKAAGTLL-YSRSLFERFQLAGCPTLLLT 1007
Query: 373 AQGRARPSICNL-YRWRYRA-LGDLCHVTQLPEYRAANAGLRHDFQLVNVDDFNGFGETE 546
Q R P I + R+ Y+ L D V+ P+ + + ++ +G
Sbjct: 1008 VQYRMHPQIRDFPSRYFYQGRLTDSESVSTAPDEIYYKDSVLKPYLFFDIS--HGRESHR 1065
Query: 547 PSPYFYQNLAEAEYVVAVFMYMR 615
Y+N+ EA + V V+++++
Sbjct: 1066 GGSVSYENIDEARFCVGVYLHLQ 1088
>At1g65810.1 68414.m07468 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 1050
Score = 46.4 bits (105), Expect = 2e-05
Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Frame = +1
Query: 145 ILMEESAQILEIETFIPLLLQNPQDGRSRLKRWIMIGDHHQLPPVVK-NMAFQKYCNMEQ 321
++++E+AQ+ E E+ IPL L+ L+ I+IGD QLP ++K N+A + ++ +
Sbjct: 556 LVIDEAAQLKECESAIPLQLRG-------LQHAILIGDEKQLPAMIKSNIASE--ADLGR 606
Query: 322 SLFTRMVRLGVPYVELDAQGRARPSI 399
SLF R+V LG L+ Q R PSI
Sbjct: 607 SLFERLVLLGHNKQLLNMQYRMHPSI 632
>At5g52090.1 68418.m06466 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 676
Score = 45.2 bits (102), Expect = 4e-05
Identities = 43/122 (35%), Positives = 61/122 (50%)
Frame = +1
Query: 34 DRSKYLLVKEAKIIAMTCTHAALKRSELVQMGFKYDNILMEESAQILEIETFIPLLLQNP 213
D K+ L + A II T + AA E + G + ++++E+AQ+ E E+ L L
Sbjct: 334 DIRKFCL-QNADIILCTASGAAEMNVE--RTG-NVELLVVDEAAQLKECESVAALQLPG- 388
Query: 214 QDGRSRLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARP 393
L+ I+IGD QLP +V N +K +SLF R+V LG LD Q R P
Sbjct: 389 ------LRHAILIGDEFQLPAMVHNEMCEK-AKFGRSLFERLVLLGHNKHLLDVQYRMHP 441
Query: 394 SI 399
SI
Sbjct: 442 SI 443
>At5g37150.1 68418.m04460 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 839
Score = 45.2 bits (102), Expect = 4e-05
Identities = 43/122 (35%), Positives = 61/122 (50%)
Frame = +1
Query: 34 DRSKYLLVKEAKIIAMTCTHAALKRSELVQMGFKYDNILMEESAQILEIETFIPLLLQNP 213
D K+ L + A II T + AA E + G + ++++E+AQ+ E E+ L L
Sbjct: 497 DIRKFCL-QNADIILCTASGAAEMNVE--RTG-NVELLVVDEAAQLKECESVAALQLPG- 551
Query: 214 QDGRSRLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARP 393
L+ I+IGD QLP +V N +K +SLF R+V LG LD Q R P
Sbjct: 552 ------LRHAILIGDEFQLPAMVHNEMCEK-AKFGRSLFERLVLLGHNKHLLDVQYRMHP 604
Query: 394 SI 399
SI
Sbjct: 605 SI 606
>At5g37030.1 68418.m04441 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 638
Score = 44.8 bits (101), Expect = 5e-05
Identities = 40/127 (31%), Positives = 61/127 (48%), Gaps = 3/127 (2%)
Frame = +1
Query: 145 ILMEESAQILEIETFIPLLLQNPQDGRSRLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQS 324
++++E+AQ+ E E+ L L L+ I+IGD QLP +V N +K +S
Sbjct: 351 LVVDEAAQLKECESVAALQLPG-------LRHAILIGDEFQLPAMVHNDQCEK-AKFGRS 402
Query: 325 LFTRMVRLGVPYVELDAQGRARPSICNL-YRWRYRA-LGDLCHVTQ-LPEYRAANAGLRH 495
LF R+V LG LD Q R PSI Y+ Y + D +V + + + R +
Sbjct: 403 LFERLVLLGHKKHLLDVQYRMHPSISRFPYKEFYGGRIKDAANVQESIYQKRFLQGNMFG 462
Query: 496 DFQLVNV 516
F +NV
Sbjct: 463 SFSFINV 469
>At4g15570.1 68417.m02379 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 818
Score = 44.4 bits (100), Expect = 6e-05
Identities = 35/123 (28%), Positives = 57/123 (46%)
Frame = +1
Query: 31 LDRSKYLLVKEAKIIAMTCTHAALKRSELVQMGFKYDNILMEESAQILEIETFIPLLLQN 210
+D + +++EA I+ T + + GF D ++++E+AQ +E T IPL
Sbjct: 451 IDSIRTAILEEAAIVFATLSFSGSALLAKSNRGF--DVVIIDEAAQAVEPATLIPLA--- 505
Query: 211 PQDGRSRLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRAR 390
+R K+ ++GD QLP V + Q S+F R+ + G P L Q R
Sbjct: 506 -----TRCKQVFLVGDPKQLPATVISTVAQD-SGYGTSMFERLQKAGYPVKMLKTQYRMH 559
Query: 391 PSI 399
P I
Sbjct: 560 PEI 562
>At5g37160.1 68418.m04461 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 871
Score = 42.3 bits (95), Expect = 3e-04
Identities = 33/105 (31%), Positives = 53/105 (50%)
Frame = +1
Query: 85 CTHAALKRSELVQMGFKYDNILMEESAQILEIETFIPLLLQNPQDGRSRLKRWIMIGDHH 264
CT +++ ++G D ++++E+AQ+ E E+ L L L ++IGD +
Sbjct: 544 CTASSVANINPARIG-SVDLLVVDETAQLKECESVAALQLPG-------LCHALLIGDEY 595
Query: 265 QLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSI 399
QLP +V N K +SLF R+V +G L+ Q R PSI
Sbjct: 596 QLPAMVHNEECDK-AKFGRSLFERLVLIGHSKHLLNVQYRMHPSI 639
>At4g05540.1 68417.m00843 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 689
Score = 42.3 bits (95), Expect = 3e-04
Identities = 38/115 (33%), Positives = 59/115 (51%)
Frame = +1
Query: 55 VKEAKIIAMTCTHAALKRSELVQMGFKYDNILMEESAQILEIETFIPLLLQNPQDGRSRL 234
++ A II T + AA +E + G D ++++E+AQ+ E E+ L LQ L
Sbjct: 407 LQNAHIIFCTASGAAEMTAE--RAG-SIDMLVVDEAAQLKECESVAALQLQG-------L 456
Query: 235 KRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSI 399
++IGD QLP +V++ +K +SLF R+ LG L+ Q R PSI
Sbjct: 457 HHAVLIGDELQLPAMVQSEVCEK-AKFVRSLFERLDSLGHKKHLLNVQYRMHPSI 510
>At5g37140.1 68418.m04458 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 692
Score = 41.1 bits (92), Expect = 6e-04
Identities = 40/120 (33%), Positives = 60/120 (50%)
Frame = +1
Query: 40 SKYLLVKEAKIIAMTCTHAALKRSELVQMGFKYDNILMEESAQILEIETFIPLLLQNPQD 219
+K ++ A II T + AA ++ G D ++++E+AQ+ E E+ L L
Sbjct: 356 TKTFCLQNADIIFCTASGAADMNP--IRTG-SVDLLVVDEAAQLKECESVAALQL----- 407
Query: 220 GRSRLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSI 399
S L+ ++IGD QLP +V N A +SLF R+V LG L+ Q R PSI
Sbjct: 408 --SGLRHAVLIGDELQLPAMVHNEA-----KFGRSLFERLVLLGHNKHLLNVQYRMHPSI 460
>At2g03270.1 68415.m00280 DNA-binding protein, putative similar to
Swiss-Prot:Q60560 DNA-binding protein SMUBP-2
(Immunoglobulin MU binding protein 2) (SMUBP-2) (Insulin
II gene enhancer-binding protein)(RIPE3B-binding complex
3B2 P110 subunit) (RIP-1)[Mesocricetus auratus];
identical to putative helicase (atpc-2 gene) cDNA
NCBI_gi:11191230
Length = 639
Score = 39.9 bits (89), Expect = 0.001
Identities = 28/99 (28%), Positives = 52/99 (52%)
Frame = +1
Query: 52 LVKEAKIIAMTCTHAALKRSELVQMGFKYDNILMEESAQILEIETFIPLLLQNPQDGRSR 231
++K A +I T T A ++ + +D ++++E AQ LE+ +I LL +
Sbjct: 339 VIKNADVILTTLTGALTRKLD----NRTFDLVIIDEGAQALEVACWIALL---------K 385
Query: 232 LKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRL 348
R I+ GDH QLPP +++ ++ + ++LF R+ L
Sbjct: 386 GSRCILAGDHLQLPPTIQSAEAERK-GLGRTLFERLADL 423
>At1g65780.1 68414.m07465 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 1065
Score = 38.3 bits (85), Expect = 0.004
Identities = 27/85 (31%), Positives = 45/85 (52%)
Frame = +1
Query: 145 ILMEESAQILEIETFIPLLLQNPQDGRSRLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQS 324
++++E+AQ+ E E+ IP+ L L+ I++GD QLP +V++ + +S
Sbjct: 567 LVIDEAAQLKECESSIPMQLPG-------LRHLILVGDERQLPAMVESQIALE-AGFGRS 618
Query: 325 LFTRMVRLGVPYVELDAQGRARPSI 399
LF R+ LG L+ Q R SI
Sbjct: 619 LFERLALLGHKKYMLNIQYRMHCSI 643
>At1g08840.1 68414.m00984 DNA replication helicase, putative similar
to helicase [Xenopus laevis] gi|18845092|gb|AAL79550
Length = 1296
Score = 34.3 bits (75), Expect = 0.068
Identities = 26/93 (27%), Positives = 49/93 (52%)
Frame = +1
Query: 61 EAKIIAMTCTHAALKRSELVQMGFKYDNILMEESAQILEIETFIPLLLQNPQDGRSRLKR 240
+ K++A TC + LV ++D +++E+ QI + PLL +
Sbjct: 993 QVKVVASTCL--GINSPLLVNR--RFDVCIIDEAGQIALPVSIGPLLFAST--------- 1039
Query: 241 WIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRM 339
++++GDH+QLPP+V++ ++ M SLF R+
Sbjct: 1040 FVLVGDHYQLPPLVQSTEAREN-GMGISLFRRL 1071
>At5g62790.1 68418.m07882 1-deoxy-D-xylulose 5-phosphate
reductoisomerase (DXR) nearly identical to
1-deoxy-d-xylulose-5-phosphate reductoisomerase
[Arabidopsis thaliana] GI:4886307; contains Pfam profile
PF02670: 1-deoxy-D-xylulose 5-phosphate reductoisomerase
Length = 477
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 240 LDHDRRPPPAAPGRQEHGVPEVLQHGTEPVHQNGQTG 350
+ ++PPPA PGR P G +P+ G TG
Sbjct: 54 VQQQQQPPPAWPGRAVPEAPRQSWDGPKPISIVGSTG 90
>At2g40820.1 68415.m05038 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 903
Score = 28.7 bits (61), Expect = 3.4
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 469 GTPGAASRGTGRPAPGSASGTG 404
G PG A RG R PG A G G
Sbjct: 843 GVPGGAGRGYARTGPGFAVGVG 864
>At1g76360.1 68414.m08872 protein kinase, putative similar to
protein kinase APK1B, SWISS-PROT:P46573; contains
protein kinase domain, Pfam:PF00069
Length = 484
Score = 28.7 bits (61), Expect = 3.4
Identities = 23/91 (25%), Positives = 34/91 (37%), Gaps = 1/91 (1%)
Frame = +3
Query: 105 TFRISANGFQIRQHTDGGISSNPRDRDVH-TAAAAESAGRQVPAEALDHDRRPPPAAPGR 281
TF + G ++R ++ PR++ H T + E+ R+ P E PP P
Sbjct: 49 TFPLPETGHKLRP-----AATPPREKPQHRTTRSVENPPREKPQEKTRSVENPPREKPQE 103
Query: 282 QEHGVPEVLQHGTEPVHQNGQTGCSVRGTGR 374
+ V Q T PV G GR
Sbjct: 104 KTRSVETPPQEKTRPVDNPPSKPVEKLGLGR 134
>At4g15396.1 68417.m02353 cytochrome P450-related similar to
Cytochrome P450 90C1 (ROTUNDIFOLIA3) (SP:Q9M066)
[Arabidopsis thaliana]; contains Pfam profile: PF00067:
Cytochrome P450 {Arabidopsis thaliana}
Length = 475
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +1
Query: 274 PVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSICNLYRWRYRALGDLCHVT 453
P V + ++ E ++ + +G PYV +A+ P N +RW+ + L + T
Sbjct: 352 PTVLRIIDHEFQFGEYTIPAGWIFMGYPYVHFNAEKYDDPLAFNPWRWKGKDLSAIVSRT 411
Query: 454 QLP 462
+P
Sbjct: 412 YIP 414
>At1g50040.1 68414.m05615 expressed protein
Length = 460
Score = 27.9 bits (59), Expect = 5.9
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -3
Query: 260 WSPIMIQRFSRDLPSCGFCSSSG 192
WS + ++ +SR SCGF ++SG
Sbjct: 102 WSVLSVEVYSRRSASCGFVAASG 124
>At1g34355.1 68414.m04265 forkhead-associated domain-containing
protein / FHA domain-containing protein
Length = 1477
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +3
Query: 114 ISANGFQIRQHTDGGISSNPRDRDVHTAAAAESAGRQVPAEALD 245
I A ++ QH ++ D D+H +E G VP+E D
Sbjct: 328 IEAENLEVAQHQSLANTALGDDEDLHLDVTSEGTGSSVPSEDED 371
>At1g03390.1 68414.m00319 transferase family protein similar to
anthranilate N-hydroxycinnamoyl/benzoyltransferase from
Dianthus caryophyllus [gi:2239091]; contains Pfam
transferase family domain PF002458
Length = 461
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +1
Query: 475 ANAGLRHDFQLVNVDDFNGFGETEPSPYFYQNLAEAEYVV 594
AN H L N+DD G PS YFY + E V
Sbjct: 33 ANQSPHHSLYLSNLDDIIGARVFTPSVYFYPSTNNRESFV 72
>At5g29020.1 68418.m03592 hypothetical protein
Length = 847
Score = 27.5 bits (58), Expect = 7.8
Identities = 20/86 (23%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
Frame = +3
Query: 3 PSLRTTEVRTGSVQVPVGQRSENNRDDVHARRPQTFRISANGFQ-IRQHTDGGISSNPRD 179
P LR+ + T + + ++ + NR V P + + +R D G +NPR+
Sbjct: 372 PKLRSRSIFTLAFEKAEKKKRKKNRKVVRPNPPGSSLCTERSLSDLRARFDFGDGANPRE 431
Query: 180 RDVHTAAAAESAGRQVPAEALDHDRR 257
RD+ + ++ G A D R+
Sbjct: 432 RDLVSDSSLLDNGLVFEASHWDTGRK 457
>At3g61850.2 68416.m06946 Dof zinc finger protein DAG1 / Dof
affecting germination 1 (DAG1) / transcription factor
BBFa (BBFA) identical to SP|Q43385 DOF zinc finger
protein DAG1 (Dof affecting germination 1)
(Transcription factor BBFa) (AtBBFa) (rolB domain B
factor a) {Arabidopsis thaliana}
Length = 284
Score = 27.5 bits (58), Expect = 7.8
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3
Query: 302 FWNAMFLTTGGSWW 261
+WN MF TGGS W
Sbjct: 271 YWNGMFSNTGGSSW 284
>At3g61850.1 68416.m06945 Dof zinc finger protein DAG1 / Dof
affecting germination 1 (DAG1) / transcription factor
BBFa (BBFA) identical to SP|Q43385 DOF zinc finger
protein DAG1 (Dof affecting germination 1)
(Transcription factor BBFa) (AtBBFa) (rolB domain B
factor a) {Arabidopsis thaliana}
Length = 296
Score = 27.5 bits (58), Expect = 7.8
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3
Query: 302 FWNAMFLTTGGSWW 261
+WN MF TGGS W
Sbjct: 283 YWNGMFSNTGGSSW 296
>At2g24310.1 68415.m02906 expressed protein
Length = 322
Score = 27.5 bits (58), Expect = 7.8
Identities = 24/84 (28%), Positives = 35/84 (41%)
Frame = +3
Query: 129 FQIRQHTDGGISSNPRDRDVHTAAAAESAGRQVPAEALDHDRRPPPAAPGRQEHGVPEVL 308
F+ + H+D G S P + AA + +VPA+ LD D PP A GR V + +
Sbjct: 202 FETKCHSDSG-DSVPLSSSPPSVAADDV---RVPAKHLDSDSSPPTAI-GRTMVLVKQRI 256
Query: 309 QHGTEPVHQNGQTGCSVRGTGRTG 380
+ G V T +G
Sbjct: 257 SASDNSASSSASEGTKVSKTENSG 280
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,703,617
Number of Sequences: 28952
Number of extensions: 292947
Number of successful extensions: 962
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 947
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1285411824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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