Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0108
(604 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC887.09c |||leucine-rich repeat protein Sog2 |Schizosaccharom... 49 5e-07
SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pom... 39 5e-04
SPCC1739.04c |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 33 0.032
SPAC4A8.12c |sds22||protein phosphatase regulatory subunit Sds22... 30 0.30
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 30 0.30
SPCC1494.06c |||ATP-dependent RNA helicase Dbp9 |Schizosaccharom... 28 0.91
SPAC926.06c |||leucine-rich repeat protein, unknown|Schizosaccha... 26 3.7
SPAC3F10.12c |||transcription factor |Schizosaccharomyces pombe|... 26 4.9
SPAC2G11.02 |urb2||ribosome biogenesis protein Urb2 |Schizosacch... 26 4.9
SPAC1F8.06 |fta5|sma5|Sim4 and Mal2 associated |Schizosaccharomy... 26 4.9
SPCC4B3.14 |cwf20||complexed with Cdc5 protein Cwf20 |Schizosacc... 25 6.4
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 25 6.4
SPAC13F5.06c |sec10||exocyst complex subunit Sec10|Schizosacchar... 25 8.5
SPBC36B7.06c |mug20||sequence orphan|Schizosaccharomyces pombe|c... 25 8.5
SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolo... 25 8.5
SPCPB1C11.03 |||cysteine transporter |Schizosaccharomyces pombe|... 25 8.5
>SPBC887.09c |||leucine-rich repeat protein Sog2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 886
Score = 49.2 bits (112), Expect = 5e-07
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 2/154 (1%)
Frame = -3
Query: 521 SNNVPLTLKEAVFSNLPALRTLQLDLSSIRELPEEFIS--NSPLRTLSLARNQLRALPRS 348
++ + +KEA + TL L ++RELP E + + L+L N ++++
Sbjct: 11 NSEIERIIKEAEDAGPENALTLDLSHLNLRELPYEQLERIQGRIARLALGHNFIKSIGPE 70
Query: 347 VLRGQTQLTSLTLSYNAVAELAPELFADLRALETFVMDGNELQVLPDSLFSGLRNLTTVS 168
+L+ T+L L + N + E PE L +LE + N+++ LP+S F L NL +S
Sbjct: 71 ILK-FTRLRYLNIRSNVLREF-PESLCRLESLEILDISRNKIKQLPES-FGALMNLKVLS 127
Query: 167 LRNNKISVISMNTFQGATSIRTLDLSYNRLAFAP 66
+ N++ + ++ L + N + F P
Sbjct: 128 ISKNRLFELP-TYIAHMPNLEILKIENNHIVFPP 160
>SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1692
Score = 39.1 bits (87), Expect = 5e-04
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 3/182 (1%)
Frame = -3
Query: 539 IQEIKISNNVPLTLKEAVFSNLPALRTLQLD-LSSIRELPEEFISNSPLRTLSLARNQLR 363
+++IK+ L + S L +RTL + +SS+ +EF+ + + L L N+L
Sbjct: 764 LEKIKLPVATSKKLTRTI-SQLKIMRTLSGNPVSSLSS--QEFVMPT-VEELYLVDNRLG 819
Query: 362 ALPRSVLRGQTQLTSLTLSYNAVAELAPELFADLRALETFVMDGNELQVLPDSLFSGLRN 183
+ L L L LSYN + E+ + F + L+ + GNEL L S + +
Sbjct: 820 NDCFTALEYFKCLKVLNLSYNYLTEIPSKFFQNFSDLKHLFVSGNELANLSISSTAQVL- 878
Query: 182 LTTVSLRNNKISVISMNTFQGATSIRTLDLSYNRL--AFAPDSLYSPLNQLHKLQTLTLA 9
L T+ N++S N + S+R LD+S N L + L +L +L+ L L+
Sbjct: 879 LETLYANGNRLSSFPKNEAL-SKSLRFLDISTNNLQNLAVEKAEKKSLTKLPQLEYLNLS 937
Query: 8 WN 3
N
Sbjct: 938 GN 939
Score = 25.4 bits (53), Expect = 6.4
Identities = 16/90 (17%), Positives = 43/90 (47%)
Frame = -3
Query: 272 FADLRALETFVMDGNELQVLPDSLFSGLRNLTTVSLRNNKISVISMNTFQGATSIRTLDL 93
F++ + + + L+V+P ++ L ++++ +N + ++ + ++ LD+
Sbjct: 401 FSEKKITANLDISRSNLEVIPVKIYPYAHELISLNVSHNLSLDLPLDFMERCVKLKRLDI 460
Query: 92 SYNRLAFAPDSLYSPLNQLHKLQTLTLAWN 3
S N +P P+ L +L+ L ++ N
Sbjct: 461 SNN--LRSPRG--KPITALRQLEVLNMSRN 486
>SPCC1739.04c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 288
Score = 33.1 bits (72), Expect = 0.032
Identities = 38/168 (22%), Positives = 71/168 (42%), Gaps = 6/168 (3%)
Frame = -3
Query: 563 EIFRGLDHIQEIKISNNVPLTLKEAVFSNLPALRTLQLDLSSIRELPEEFISNSPLRTLS 384
E+F + I KIS + +TL + +S L +R+L EF+ N P LS
Sbjct: 13 ELFGQISKISHSKISISELITLLDIHYSELFTKNPWMK--KEVRKLASEFVENDPNHLLS 70
Query: 383 LARNQLRALPRSVLRGQTQLTSLTLSYNAVAELAPELFADLRALET------FVMDGNEL 222
++ + V +TS TL + + P L+ L A T F + + L
Sbjct: 71 -KQDACHLIEAFV---NVSITSPTL----LTSVDPVLYQQLEASSTNDISTVFEDESSSL 122
Query: 221 QVLPDSLFSGLRNLTTVSLRNNKISVISMNTFQGATSIRTLDLSYNRL 78
++ FS ++ T S ++ +S N F A + +++++++
Sbjct: 123 PIILHPKFSSMQVRTVTSPKDAFVSAFEENKFHFAATESFFEMAFSKI 170
>SPAC4A8.12c |sds22||protein phosphatase regulatory subunit Sds22
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 332
Score = 29.9 bits (64), Expect = 0.30
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Frame = -3
Query: 398 LRTLSLARNQLRALPRSVLRGQTQLTSLTLSYNAVA---ELAPELFADLRALETFVMDGN 228
L L ++ N ++ L S L G L L S N ++ E+ EL + L+ LET +GN
Sbjct: 239 LEILDVSNNMIKHL--SYLAGLKNLVELWASNNELSSFQEIEDEL-SGLKKLETVYFEGN 295
Query: 227 ELQVLPDSLFSGLRNLTTVSLRNNKISVISMNTFQ 123
LQ +++ L LR ++I + Q
Sbjct: 296 PLQKTNPAVYRNKVRLCLPQLRQIDATIIPKTSKQ 330
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 29.9 bits (64), Expect = 0.30
Identities = 18/60 (30%), Positives = 35/60 (58%)
Frame = -3
Query: 257 ALETFVMDGNELQVLPDSLFSGLRNLTTVSLRNNKISVISMNTFQGATSIRTLDLSYNRL 78
++E ++GNE+ L + +R+L V N++S S+ +F +++ LD+SYN+L
Sbjct: 627 SIEELTLEGNEIAYLTGCPVT-IRDLNAVE---NRLS--SLTSFSNLLNLQYLDISYNQL 680
>SPCC1494.06c |||ATP-dependent RNA helicase Dbp9
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 595
Score = 28.3 bits (60), Expect = 0.91
Identities = 25/95 (26%), Positives = 42/95 (44%)
Frame = -3
Query: 470 ALRTLQLDLSSIRELPEEFISNSPLRTLSLARNQLRALPRSVLRGQTQLTSLTLSYNAVA 291
+L + + D S +R L ++ IS P S +NQ+ A + +T++ +S A
Sbjct: 443 SLESCKKDESVLRRLEKKQISLQPY---SFDKNQIDAFRYRMEDALRAVTTVAVSAARAA 499
Query: 290 ELAPELFADLRALETFVMDGNELQVLPDSLFSGLR 186
EL EL + F + +EL L S +R
Sbjct: 500 ELKQELLISEKLKSYFAENPDELLSLTHDTVSSVR 534
>SPAC926.06c |||leucine-rich repeat protein,
unknown|Schizosaccharomyces pombe|chr 1|||Manual
Length = 621
Score = 26.2 bits (55), Expect = 3.7
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = -3
Query: 155 KISVISMNTFQGATSIRTLDLSYNRLAFAPDSLYSPLNQLHKLQTLTLAWN 3
K+ I N F S+ +LDLS N L P Y+ L +L +L +L LA N
Sbjct: 343 KLKSIPKNVFLSLQSLVSLDLSGNELTEIP---YA-LGELPQLCSLNLASN 389
>SPAC3F10.12c |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 25.8 bits (54), Expect = 4.9
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +3
Query: 366 ELVARERQGPQRGVADELLRELADRAEVQL*RPQCREVREHRLFESKRNVVRDFDL-LYV 542
E + RE+ ++ VAD ++ELA R +L + +C R R E + R FD L V
Sbjct: 140 EEMCREKSNLEKLVADHTIQELA-RENARL-KSECE--RAWRSVELWKQAARSFDSELDV 195
Query: 543 IESSE 557
E+SE
Sbjct: 196 EENSE 200
>SPAC2G11.02 |urb2||ribosome biogenesis protein Urb2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1318
Score = 25.8 bits (54), Expect = 4.9
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 2/129 (1%)
Frame = -3
Query: 467 LRTLQLDLSSIRELPEEFISNSPLRTLSLARNQL-RALPRSV-LRGQTQLTSLTLSYNAV 294
L+ LQL L+ REL PL T++L N L +LP S ++ + S + N +
Sbjct: 854 LKLLQLILADFREL--------PLETITLIFNALVDSLPTSKHIKNSNDILSSVFTINDM 905
Query: 293 AELAPELFADLRALETFVMDGNELQVLPDSLFSGLRNLTTVSLRNNKISVISMNTFQGAT 114
L E+ A L E+ + + +NLT+ SL NK+ ++ + + A
Sbjct: 906 --LIDEMTAYLSKKESLCSGTFSCLLACCNSVLRTQNLTSESL--NKLHILKVGIEEKAI 961
Query: 113 SIRTLDLSY 87
S++ +L +
Sbjct: 962 SLKLNELPF 970
>SPAC1F8.06 |fta5|sma5|Sim4 and Mal2 associated |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 385
Score = 25.8 bits (54), Expect = 4.9
Identities = 20/96 (20%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Frame = -3
Query: 455 QLDLSSIRELPEEFISNS-PLRTLSLARNQLRALPRSVLRGQTQLTSLTLSYNAVAELAP 279
QL +SS E+ S+S P+ T+S + + + + +++ + ++ +S + + ++
Sbjct: 77 QLSISSSSSTSSEYSSSSIPITTVSSSDSFIPSSSQTISASSSTTDNVIVSSSISSTVSS 136
Query: 278 ELFADL---RALETFVMDGNELQVLPDSLFSGLRNL 180
+ + + TFV QV+P + G+R L
Sbjct: 137 TPVSTIYSGTSGTTFVSSSTTYQVIPTQICDGVRGL 172
>SPCC4B3.14 |cwf20||complexed with Cdc5 protein Cwf20
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 290
Score = 25.4 bits (53), Expect = 6.4
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = -3
Query: 422 EEFISNSPLRTLSLARNQLRALPRSVLRGQTQLT-SLTLSYNAVAEL 285
E F SN L L +NQ P+S R L + L N+V++L
Sbjct: 75 ERFKSNDLLELLPAPKNQAELAPKSSKRSDLDLNENYLLPNNSVSDL 121
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 25.4 bits (53), Expect = 6.4
Identities = 31/127 (24%), Positives = 55/127 (43%), Gaps = 3/127 (2%)
Frame = -3
Query: 503 TLKEAVFSNLPALRTLQLDLSSIRELPEEFISNSPLRTLSLARNQLRALPRSVLRGQTQL 324
TLKE + + ALR +L+ ++RE+ + TL RN L + L
Sbjct: 693 TLKEDLRKSEEALRFSKLEAKNLREVIDNL--KGKHETLEAQRNDLHSSLSDAKNTNAIL 750
Query: 323 TS-LTLSYNAVAELAPELFADLRALETFVMDGNELQVLPDSLFSGLRNLTTV--SLRNNK 153
+S LT S V L +ET D ++ SL + ++++ + LR++
Sbjct: 751 SSELTKSSEDVKRLTAN-------VETLTQDSKAMKQSFTSLVNSYQSISNLYHELRDDH 803
Query: 152 ISVISMN 132
+++ S N
Sbjct: 804 VNMQSQN 810
>SPAC13F5.06c |sec10||exocyst complex subunit
Sec10|Schizosaccharomyces pombe|chr 1|||Manual
Length = 811
Score = 25.0 bits (52), Expect = 8.5
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -3
Query: 482 SNLPALRTLQLDLSSIRELPEEFISNSPLRTLSLARN 372
SNL LRTLQ +SS+R+L + + R S++ N
Sbjct: 346 SNLAYLRTLQTVVSSLRKLVADLKTILENRGFSVSDN 382
>SPBC36B7.06c |mug20||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 169
Score = 25.0 bits (52), Expect = 8.5
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -3
Query: 398 LRTLSLARNQLRALPRSVLRGQTQLTSLTLSYNAV-AEL 285
L +L +LRAL + L L++L + YN++ AEL
Sbjct: 49 LESLRTTEEKLRALDKLQLDASKNLSNLLVEYNSINAEL 87
>SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolog
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 25.0 bits (52), Expect = 8.5
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -3
Query: 551 GLDHIQEIKISNNVPLTLKEAVFSNLPALRTLQL 450
GL HI +S +VP L++ VFS+ P + + +L
Sbjct: 705 GLSHISSRNVSISVPTVLQD-VFSDSPLVLSRKL 737
>SPCPB1C11.03 |||cysteine transporter |Schizosaccharomyces pombe|chr
3|||Manual
Length = 570
Score = 25.0 bits (52), Expect = 8.5
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 103 VRMDVAPWNVFMEMTLILLFLNETVVKFLSPEN 201
V +APW +FM +T + F + F P+N
Sbjct: 252 VTKSIAPWKLFMIITGGITFFLSIFLFFYYPDN 284
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,935,950
Number of Sequences: 5004
Number of extensions: 31988
Number of successful extensions: 128
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 127
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 264253462
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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