Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0088
(518 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42438-8|AAF99867.2| 368|Caenorhabditis elegans Homolog of yeas... 33 0.12
AF105010-1|AAD16893.1| 368|Caenorhabditis elegans LAG1Ce-1 prot... 33 0.12
AC006708-15|AAF60425.1| 504|Caenorhabditis elegans Hypothetical... 33 0.12
Z73427-4|CAA97802.3| 601|Caenorhabditis elegans Hypothetical pr... 33 0.16
AC006644-6|AAZ91358.1| 958|Caenorhabditis elegans Hypothetical ... 31 0.37
AL034543-2|CAA22515.1| 1696|Caenorhabditis elegans Hypothetical ... 30 1.1
M77697-3|AAA27898.3| 616|Caenorhabditis elegans Hypothetical pr... 29 1.5
AF125461-2|AAK18994.1| 158|Caenorhabditis elegans Hypothetical ... 29 2.0
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 29 2.6
AL132902-10|CAB82002.1| 286|Caenorhabditis elegans Hypothetical... 29 2.6
AC025727-4|AAG23388.3| 463|Caenorhabditis elegans Hypothetical ... 29 2.6
Z82090-4|CAB05008.2| 543|Caenorhabditis elegans Hypothetical pr... 28 3.5
AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical ... 28 3.5
AC024792-2|AAF60680.2| 813|Caenorhabditis elegans Hypothetical ... 28 3.5
U97194-2|AAN84846.1| 806|Caenorhabditis elegans Prion-like-(q/n... 28 4.6
U97194-1|AAK68236.1| 788|Caenorhabditis elegans Prion-like-(q/n... 28 4.6
AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical ... 28 4.6
AF170425-1|AAF89696.1| 788|Caenorhabditis elegans putative MAP-... 28 4.6
Z49967-7|CAA90257.1| 740|Caenorhabditis elegans Hypothetical pr... 27 6.1
U52072-1|AAD11465.1| 97|Caenorhabditis elegans dauer-upregulat... 27 6.1
Z74043-7|CAA98539.2| 705|Caenorhabditis elegans Hypothetical pr... 27 8.0
U97006-3|AAC47966.1| 470|Caenorhabditis elegans Hypothetical pr... 27 8.0
AL032626-18|CAA21543.2| 458|Caenorhabditis elegans Hypothetical... 27 8.0
>U42438-8|AAF99867.2| 368|Caenorhabditis elegans Homolog of yeast
longevity geneprotein 1 protein.
Length = 368
Score = 33.1 bits (72), Expect = 0.12
Identities = 11/42 (26%), Positives = 25/42 (59%)
Frame = +3
Query: 153 LAVFGFLIQRVVFGQLRVSEAQRVKDKFWNYVFYKFIFIFGV 278
+ + G + + + G VS A+++ + FW + +Y F F++G+
Sbjct: 69 ITLLGCMWEHMTGGFASVSRAKKILECFWRFSYYTFAFLYGL 110
>AF105010-1|AAD16893.1| 368|Caenorhabditis elegans LAG1Ce-1
protein.
Length = 368
Score = 33.1 bits (72), Expect = 0.12
Identities = 11/42 (26%), Positives = 25/42 (59%)
Frame = +3
Query: 153 LAVFGFLIQRVVFGQLRVSEAQRVKDKFWNYVFYKFIFIFGV 278
+ + G + + + G VS A+++ + FW + +Y F F++G+
Sbjct: 69 ITLLGCMWEHMTGGFASVSRAKKILECFWRFSYYTFAFLYGL 110
>AC006708-15|AAF60425.1| 504|Caenorhabditis elegans Hypothetical
protein Y110A7A.8 protein.
Length = 504
Score = 33.1 bits (72), Expect = 0.12
Identities = 18/55 (32%), Positives = 32/55 (58%)
Frame = -1
Query: 302 LVHVLNVDYSEDEDEFVEDIVPELVLDALSLRDPELTEDDALDQETEDGEEAVRY 138
L L D+ +D+DE +EDI P+L + ++ EL DD +++ TE+ + +Y
Sbjct: 3 LAEELMADFDDDDDEDLEDI-PDLGENLKGVKKEEL--DDDIEEATEEPMDTTKY 54
>Z73427-4|CAA97802.3| 601|Caenorhabditis elegans Hypothetical
protein F58B3.4 protein.
Length = 601
Score = 32.7 bits (71), Expect = 0.16
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = -1
Query: 275 SEDEDEFVEDIVPELVLDALSLRDPELTEDDALDQETEDGEE 150
++DED+ ++D E D +L D + ED+ D+E ED EE
Sbjct: 98 TKDEDDELDDFFDEKDDDEDALEDADDEEDEISDEENEDEEE 139
>AC006644-6|AAZ91358.1| 958|Caenorhabditis elegans Hypothetical
protein F55A3.1 protein.
Length = 958
Score = 31.5 bits (68), Expect = 0.37
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = -1
Query: 296 HVLNVDYSEDEDEFVEDIVPELVLDALSLRDPELTEDDALDQETEDGEE 150
H LN++ E+E E +D+V E + D E EDD D + +D EE
Sbjct: 215 HFLNIEAEENEGE--DDVVNENNESSDESEDDEEDEDDEEDDDEDDEEE 261
>AL034543-2|CAA22515.1| 1696|Caenorhabditis elegans Hypothetical
protein Y81G3A.3 protein.
Length = 1696
Score = 29.9 bits (64), Expect = 1.1
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = -1
Query: 332 ESKPRTPQHHLVHVLNVDYSEDEDEFVEDIVPELVLDALSLRDPELTEDDALDQETEDGE 153
+SK TP L H+ S+DED+ D E+ DA S + DD+ +++ +DGE
Sbjct: 652 QSKRSTPSGGLKHLSECS-SDDEDD---DDSSEIDWDAESEEVEDEESDDSDEEDEDDGE 707
Query: 152 EAVR 141
V+
Sbjct: 708 RLVQ 711
>M77697-3|AAA27898.3| 616|Caenorhabditis elegans Hypothetical
protein B0303.4 protein.
Length = 616
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -1
Query: 203 PELTEDDALDQETEDGEE 150
PELTED +DQ+ ED EE
Sbjct: 241 PELTEDIVIDQQEEDDEE 258
>AF125461-2|AAK18994.1| 158|Caenorhabditis elegans Hypothetical
protein Y8A9A.3 protein.
Length = 158
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -1
Query: 278 YSEDEDEFVEDIVPELVLDALSLRDPELTEDDALDQETEDGEEAVRY 138
Y DE E E+ E+ LD + E +ED+ D++ EDG R+
Sbjct: 9 YKADEKE--EEKAEEVELDDSDVESEEESEDEESDEDPEDGPAPRRF 53
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 28.7 bits (61), Expect = 2.6
Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = -1
Query: 269 DEDEFVEDI-VPELVLDALSLRDPELTEDDALDQETEDGEEAV 144
DE+EF++ + +P + DAL D L ED +D+E ++ E ++
Sbjct: 895 DENEFLDCVGLPNMETDALDDFDFNLLEDFDVDEENDELENSL 937
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 28.7 bits (61), Expect = 2.6
Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = -1
Query: 269 DEDEFVEDI-VPELVLDALSLRDPELTEDDALDQETEDGEEAV 144
DE+EF++ + +P + DAL D L ED +D+E ++ E ++
Sbjct: 895 DENEFLDCVGLPNMETDALDDFDFNLLEDFDVDEENDELENSL 937
>AL132902-10|CAB82002.1| 286|Caenorhabditis elegans Hypothetical
protein Y71A12B.11 protein.
Length = 286
Score = 28.7 bits (61), Expect = 2.6
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
Frame = -1
Query: 338 ADESKPRTPQHHLVHVLNVDYSEDEDEFV-------EDIVPELVLDALSLRDPEL-TEDD 183
A ESKP +V S+DE E E+ V E DAL+ +PE D+
Sbjct: 153 AFESKPEALDDSESEASDVSESKDESESEGSDDSEDEEYVEETCTDALNQLEPESDAADE 212
Query: 182 ALDQETEDGEEA 147
++++E E+ E++
Sbjct: 213 SVEEEEEEDEDS 224
>AC025727-4|AAG23388.3| 463|Caenorhabditis elegans Hypothetical
protein Y73E7A.2 protein.
Length = 463
Score = 28.7 bits (61), Expect = 2.6
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = -1
Query: 350 QVQEADESKPRTPQHHLVHVLNVDYSEDEDEFVEDIVPELVLDALSLRDPELTEDDA 180
++ DES+P N D ++EDE E+I + + LSL+D E D A
Sbjct: 93 KIDNFDESEPEIEDEEE----NEDLEDEEDENPEEIDTNMGMTTLSLKDEEDKADKA 145
>Z82090-4|CAB05008.2| 543|Caenorhabditis elegans Hypothetical
protein ZK337.2 protein.
Length = 543
Score = 28.3 bits (60), Expect = 3.5
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -2
Query: 490 HATATPNKAVEA-ASIPRSRPTSRT-CTQRAVLGDDARYSNRSLHSCPIRCRKP 335
H+TA N+ + A A+ SR SR+ + DD R+ N S S PI +KP
Sbjct: 166 HSTAHFNQLLAAGAAYELSRERSRSESDMQPTQEDDVRHLNTSTISVPIYAKKP 219
>AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical
protein Y48B6A.4 protein.
Length = 474
Score = 28.3 bits (60), Expect = 3.5
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +1
Query: 361 CAR-IGLNI*RRRPTQHVGCMFDWSVYSWVYWPPPQLYWALQSHGACPPER 510
CA I +NI R P H M DW+ Y ++ W P L + H C P R
Sbjct: 313 CASLIIVNIFFRHPKTHR--MGDWTRYVFLEWLPWFLLMSRPEHTFCRPRR 361
>AC024792-2|AAF60680.2| 813|Caenorhabditis elegans Hypothetical
protein Y48G1A.4 protein.
Length = 813
Score = 28.3 bits (60), Expect = 3.5
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Frame = -1
Query: 287 NVDYSE--DEDEFVEDIVPELVLDALSLRDPELTEDDALDQETEDGEEAVR 141
N+D S+ D+DE +ED E LD L L D + E+D+ D+E ++ ++ V+
Sbjct: 322 NLDGSDESDDDEDLED--EEEDLDDL-LEDEDELEEDSDDEEAQEAQKVVK 369
>U97194-2|AAN84846.1| 806|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 21,
isoform b protein.
Length = 806
Score = 27.9 bits (59), Expect = 4.6
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = -1
Query: 359 LPHQVQEADESKPRTPQHHLVHVLNVDYSE-DEDEFVEDIVPELVLDALSLRDPELTEDD 183
LP +QE E + H + E DED+ +DI P + + + L E ED
Sbjct: 31 LPPPLQETPEFQTTYDAHDQAETSGKEDGELDEDDENDDIEPMEIDEEIQLEIDEKPEDL 90
Query: 182 ALDQETEDGEEAVR 141
D++ + + +R
Sbjct: 91 VKDEQISEPTDKMR 104
>U97194-1|AAK68236.1| 788|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 21,
isoform a protein.
Length = 788
Score = 27.9 bits (59), Expect = 4.6
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = -1
Query: 359 LPHQVQEADESKPRTPQHHLVHVLNVDYSE-DEDEFVEDIVPELVLDALSLRDPELTEDD 183
LP +QE E + H + E DED+ +DI P + + + L E ED
Sbjct: 31 LPPPLQETPEFQTTYDAHDQAETSGKEDGELDEDDENDDIEPMEIDEEIQLEIDEKPEDL 90
Query: 182 ALDQETEDGEEAVR 141
D++ + + +R
Sbjct: 91 VKDEQISEPTDKMR 104
>AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical
protein Y38E10A.6a protein.
Length = 1343
Score = 27.9 bits (59), Expect = 4.6
Identities = 20/75 (26%), Positives = 34/75 (45%)
Frame = -1
Query: 377 KPILAQLPHQVQEADESKPRTPQHHLVHVLNVDYSEDEDEFVEDIVPELVLDALSLRDPE 198
K + QLP Q + P HH +H + +DE EF+ D + D R+ E
Sbjct: 17 KYVRKQLPQPPQFVSSAVTSGPMHHRMHEQH-QQLDDEREFLRDHLAR--NDPFFPRELE 73
Query: 197 LTEDDALDQETEDGE 153
+ D ++Q+ +D +
Sbjct: 74 -PQQDVVEQQLQDAD 87
>AF170425-1|AAF89696.1| 788|Caenorhabditis elegans putative
MAP-like protein protein.
Length = 788
Score = 27.9 bits (59), Expect = 4.6
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = -1
Query: 359 LPHQVQEADESKPRTPQHHLVHVLNVDYSE-DEDEFVEDIVPELVLDALSLRDPELTEDD 183
LP +QE E + H + E DED+ +DI P + + + L E ED
Sbjct: 31 LPPPLQETPEFQTTYDAHDQAETSGKEDGELDEDDENDDIEPMEIDEEIQLEIDEKPEDL 90
Query: 182 ALDQETEDGEEAVR 141
D++ + + +R
Sbjct: 91 VKDEQISEPTDKMR 104
>Z49967-7|CAA90257.1| 740|Caenorhabditis elegans Hypothetical
protein F54C9.9 protein.
Length = 740
Score = 27.5 bits (58), Expect = 6.1
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -1
Query: 278 YSEDEDEFVEDIVPELVLDALSLRDPELTEDDALDQETEDGEE 150
+S+ ED ED L +D L + E +DD D+E+ D E+
Sbjct: 407 FSDMEDSDYEDY-DNLDVDELKREEQEADDDDEEDEESVDDED 448
>U52072-1|AAD11465.1| 97|Caenorhabditis elegans dauer-upregulated
protein 191 protein.
Length = 97
Score = 27.5 bits (58), Expect = 6.1
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1
Query: 140 YVY*CLYIIFLSFPSNCFLFM 78
+ Y C I+F+ F S CFLF+
Sbjct: 54 FCYFCFVILFVFFSSPCFLFL 74
>Z74043-7|CAA98539.2| 705|Caenorhabditis elegans Hypothetical
protein T19B10.5 protein.
Length = 705
Score = 27.1 bits (57), Expect = 8.0
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 145 YAMFINVYTLFFYHFLRTVFCLCIFILH 62
Y F++ + LFF F T FC+ IFI H
Sbjct: 81 YQSFLSFFQLFF-SFHPTFFCIQIFIPH 107
>U97006-3|AAC47966.1| 470|Caenorhabditis elegans Hypothetical
protein C13F10.6 protein.
Length = 470
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = -1
Query: 317 TPQHHLVHVLNVDYSEDEDEFVEDIV---PELVLDALSLRDPELTEDDALDQET 165
+P ++ LN+ + ++ED V+D+ P + A + L ED + ET
Sbjct: 259 SPTRKMIPTLNIQFRDEEDNTVKDLADACPSIFKKAEVIHMTNLHEDGFIQLET 312
>AL032626-18|CAA21543.2| 458|Caenorhabditis elegans Hypothetical
protein Y37D8A.22 protein.
Length = 458
Score = 27.1 bits (57), Expect = 8.0
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +3
Query: 282 NVQYMDEVMLWCSWFTLVGFLHLMG 356
+VQ +++ +LW SW+ L+G L +G
Sbjct: 113 HVQTIEKHILWWSWWVLLGVLSSIG 137
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,714,096
Number of Sequences: 27780
Number of extensions: 290372
Number of successful extensions: 1124
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1124
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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