Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0086
(524 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 28 0.22
Y17703-1|CAA76823.1| 111|Anopheles gambiae D7r1 protein protein. 27 0.39
AY045760-1|AAK84942.1| 165|Anopheles gambiae D7-related 1 prote... 27 0.39
AJ133852-1|CAB39727.1| 165|Anopheles gambiae D7-related 1 prote... 27 0.39
M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein. 25 1.6
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 25 2.1
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 24 2.7
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 27.9 bits (59), Expect = 0.22
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +3
Query: 231 QLRKRGRRQFPHEDIR*AQAHHRQTQPEVRNGPRFLQAGHEQVRRHAPPRVREDYERLQQ 410
Q +++G R P + +R Q +Q +P + + Q +Q R+ PP++R+ ++ Q
Sbjct: 256 QQQQQGERYVPPQ-LR--QQRQQQQRPRQQQQQQ-QQQQQQQGERYVPPQLRQQRQQQQH 311
Query: 411 NCQTQQE 431
Q QQ+
Sbjct: 312 QQQQQQQ 318
Score = 25.8 bits (54), Expect = 0.89
Identities = 17/73 (23%), Positives = 34/73 (46%)
Frame = +3
Query: 213 QAAAPSQLRKRGRRQFPHEDIR*AQAHHRQTQPEVRNGPRFLQAGHEQVRRHAPPRVRED 392
Q Q +++ ++Q H+ Q Q Q + + PR +Q + PR+++
Sbjct: 345 QQRQQQQRQQQQQQQQQHQQ----QQQQWQQQQQQQQQPRQSLPHRKQTQLQLSPRLQQQ 400
Query: 393 YERLQQNCQTQQE 431
++ QQ+ Q QQ+
Sbjct: 401 QQQQQQSQQQQQQ 413
Score = 25.0 bits (52), Expect = 1.6
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +3
Query: 339 QAGHEQVRRHAPPRVREDYERLQQNCQTQQE 431
Q +Q R+ PP++R+ ++ Q+ Q QQ+
Sbjct: 255 QQQQQQGERYVPPQLRQQRQQQQRPRQQQQQ 285
>Y17703-1|CAA76823.1| 111|Anopheles gambiae D7r1 protein protein.
Length = 111
Score = 27.1 bits (57), Expect = 0.39
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +1
Query: 373 HHEFVKTMNGFNKTAKHNKNLYMKGGSVR 459
+H+ +K +N K KH+ NL GG +
Sbjct: 75 YHKLIKPLNAIEKDRKHDFNLEKCGGQTQ 103
>AY045760-1|AAK84942.1| 165|Anopheles gambiae D7-related 1 protein
protein.
Length = 165
Score = 27.1 bits (57), Expect = 0.39
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +1
Query: 373 HHEFVKTMNGFNKTAKHNKNLYMKGGSVR 459
+H+ +K +N K KH+ NL GG +
Sbjct: 75 YHKLIKPLNAIEKDRKHDFNLEKCGGQTQ 103
>AJ133852-1|CAB39727.1| 165|Anopheles gambiae D7-related 1 protein
protein.
Length = 165
Score = 27.1 bits (57), Expect = 0.39
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +1
Query: 373 HHEFVKTMNGFNKTAKHNKNLYMKGGSVR 459
+H+ +K +N K KH+ NL GG +
Sbjct: 75 YHKLIKPLNAIEKDRKHDFNLEKCGGQTQ 103
>M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein.
Length = 613
Score = 25.0 bits (52), Expect = 1.6
Identities = 17/73 (23%), Positives = 35/73 (47%)
Frame = +3
Query: 231 QLRKRGRRQFPHEDIR*AQAHHRQTQPEVRNGPRFLQAGHEQVRRHAPPRVREDYERLQQ 410
Q +++ ++Q + R Q +Q Q + ++ R Q ++V++ R+ ++ QQ
Sbjct: 239 QQQQQQQQQQQQQQQRNQQREWQQQQQQQQHQQREQQQ-QQRVQQQNQQHQRQQQQQQQQ 297
Query: 411 NCQTQQESVHEGW 449
Q QQ+ E W
Sbjct: 298 RQQQQQQEQQELW 310
Score = 24.6 bits (51), Expect = 2.1
Identities = 19/80 (23%), Positives = 33/80 (41%)
Frame = +3
Query: 222 APSQLRKRGRRQFPHEDIR*AQAHHRQTQPEVRNGPRFLQAGHEQVRRHAPPRVREDYER 401
A S +RGR+ ++ R Q H+Q + + + Q +Q ++ + R
Sbjct: 205 AHSSRNRRGRQGPQQQEQRQQQQQHQQREQQQQQ-----QQQQQQQQQQQQQQQRNQQRE 259
Query: 402 LQQNCQTQQESVHEGWERTR 461
QQ Q QQ E ++ R
Sbjct: 260 WQQQQQQQQHQQREQQQQQR 279
Score = 23.4 bits (48), Expect = 4.7
Identities = 12/50 (24%), Positives = 22/50 (44%)
Frame = +3
Query: 282 AQAHHRQTQPEVRNGPRFLQAGHEQVRRHAPPRVREDYERLQQNCQTQQE 431
AQ H R GP+ + +Q + + ++ ++ QQ Q QQ+
Sbjct: 202 AQGAHSSRNRRGRQGPQQQEQRQQQQQHQQREQQQQQQQQQQQQQQQQQQ 251
Score = 23.4 bits (48), Expect = 4.7
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Frame = +3
Query: 192 QGRVECLQAAAPSQLRKRGRRQFPHEDIR*AQAHHRQTQPEVRNGPRFLQAG-----HEQ 356
+GR Q Q ++ +R+ + + Q +Q Q + RN R Q H+Q
Sbjct: 212 RGRQGPQQQEQRQQQQQHQQREQQQQQQQQQQQQQQQQQQQQRNQQREWQQQQQQQQHQQ 271
Query: 357 VRRHAPPRVREDYERLQQNCQTQQE 431
+ RV++ ++ Q+ Q QQ+
Sbjct: 272 REQQQQQRVQQQNQQHQRQQQQQQQ 296
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 24.6 bits (51), Expect = 2.1
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +3
Query: 381 VREDYERLQQNCQTQQESVHEGWERTRG 464
++EDY RL+ Q +E +++ RG
Sbjct: 174 LKEDYNRLKHEMQMAEEETQFTYQKKRG 201
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 24.2 bits (50), Expect = 2.7
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 327 PRFLQAGHEQVRRHAPPRVREDYER 401
PR+LQ ++++RH R RE +R
Sbjct: 700 PRYLQVSMDELKRHTQQR-REQLQR 723
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 510,774
Number of Sequences: 2352
Number of extensions: 10325
Number of successful extensions: 19
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48205926
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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