Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0086
(524 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92812-8|CAB07275.1| 337|Caenorhabditis elegans Hypothetical pr... 53 1e-07
Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z70750-3|CAA94738.1| 374|Caenorhabditis elegans Hypothetical pr... 37 0.008
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 30 1.2
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 29 2.0
U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in bl... 29 2.0
AF125960-2|AAD14736.1| 478|Caenorhabditis elegans Hypothetical ... 29 2.7
AL132951-7|CAD89753.2| 608|Caenorhabditis elegans Hypothetical ... 28 4.7
Z69787-2|CAA93635.2| 474|Caenorhabditis elegans Hypothetical pr... 27 8.2
AF000196-10|AAC24250.1| 172|Caenorhabditis elegans Hypothetical... 27 8.2
AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in ... 27 8.2
AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical ... 27 8.2
>Z92812-8|CAB07275.1| 337|Caenorhabditis elegans Hypothetical
protein T03E6.7 protein.
Length = 337
Score = 53.2 bits (122), Expect = 1e-07
Identities = 28/107 (26%), Positives = 57/107 (53%)
Frame = +1
Query: 196 EEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLH 375
E+W +K Y SE E+ M+ + ++ I HN+ + +G ++++G+N D+
Sbjct: 30 EKWDDYKEDFDKEY-SESEEQTYMEAFVKNMIHIENHNRDHRLGRKTFEMGLNHIADLPF 88
Query: 376 HEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWR 516
++ K +NG+ + L+ + F++P NV++P++VDWR
Sbjct: 89 SQYRK-LNGY-------RRLFGDSRIKNSSSFLAPFNVQVPDEVDWR 127
>Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical
protein F15D4.4 protein.
Length = 608
Score = 38.7 bits (86), Expect = 0.003
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +1
Query: 208 AFK-LQHRLNYESEVEDNF-RMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLHHE 381
AFK L +N+ S ++ R +Y++ K + +HN YE+G+ SYK+ N++ L E
Sbjct: 134 AFKSLMDVINFNSTAKEGLKRFNVYSKVKKEVDEHNIMYELGMSSYKMSTNQFSVALDGE 193
>Z70750-3|CAA94738.1| 374|Caenorhabditis elegans Hypothetical
protein C50F4.3 protein.
Length = 374
Score = 37.1 bits (82), Expect = 0.008
Identities = 20/80 (25%), Positives = 40/80 (50%)
Frame = +1
Query: 196 EEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLH 375
+E+ F ++++ NY+ E+E FR + + + + K N+ + K G+NK+ D+
Sbjct: 45 KEFEDFIVKYKRNYKDEIEKKFRFQQFVATHNRVGKMNKAAKKAGHDTKYGINKFSDLSK 104
Query: 376 HEFVKTMNGFNKTAKHNKNL 435
E + F K+N N+
Sbjct: 105 KEIHGMYSKFG-PPKNNTNV 123
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 285 QAHHRQTQPEVRNGPRFLQAGHEQ-VRRHAPPRVREDY 395
Q HH+Q Q ++ PR + H Q RRH P DY
Sbjct: 187 QQHHQQQQQQLAFRPRHRSSHHHQEPRRHRAPSPDPDY 224
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 29.1 bits (62), Expect = 2.0
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Frame = -2
Query: 445 PSCTDSCCVWQFCXXXXXXXRTRGGACLRTCS--CPACKK-RGPFRTSGCVWR*CACAQR 275
P C SC Q C + AC ++CS C A + + P +T C+C Q
Sbjct: 357 PQCQQSC--QQQCVQQQQPMQQCAPACTQSCSQSCSAAQPAQMPCQTQSV--NSCSCQQN 412
Query: 274 ISSCGN 257
S CGN
Sbjct: 413 YSPCGN 418
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 29.1 bits (62), Expect = 2.0
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Frame = -2
Query: 445 PSCTDSCCVWQFCXXXXXXXRTRGGACLRTCS--CPACKK-RGPFRTSGCVWR*CACAQR 275
P C SC Q C + AC ++CS C A + + P +T C+C Q
Sbjct: 357 PQCQQSC--QQQCVQQQQPMQQCAPACTQSCSQSCSAAQPAQMPCQTQSV--NSCSCQQN 412
Query: 274 ISSCGN 257
S CGN
Sbjct: 413 YSPCGN 418
>U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 2 protein.
Length = 572
Score = 29.1 bits (62), Expect = 2.0
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Frame = -2
Query: 445 PSCTDSCCVWQFCXXXXXXXRTRGGACLRTCSCPACKKRGPFRTSGCVWR*---CACAQR 275
P C SC Q C + AC ++CS +C P + C+ + C+C Q
Sbjct: 504 PQCQQSC--QQQCIQQLQPIQQCATACTQSCS-QSCSAAQPAQMP-CITQSANSCSCQQN 559
Query: 274 ISSCGN 257
S CGN
Sbjct: 560 YSPCGN 565
>AF125960-2|AAD14736.1| 478|Caenorhabditis elegans Hypothetical
protein T12B3.2 protein.
Length = 478
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -1
Query: 419 LAVLLKPFIVFTNSWWSMSPYLFMPSL*ETR-PISYFWL 306
+ ++L PF+ + N+WWS + + + L ISYF+L
Sbjct: 408 IGMILAPFLTYANTWWSPAVNVTVIVLGSANLLISYFFL 446
>AL132951-7|CAD89753.2| 608|Caenorhabditis elegans Hypothetical
protein Y67H2A.10 protein.
Length = 608
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/68 (23%), Positives = 31/68 (45%)
Frame = +3
Query: 255 QFPHEDIR*AQAHHRQTQPEVRNGPRFLQAGHEQVRRHAPPRVREDYERLQQNCQTQQES 434
Q P + + Q H QP+ P+ Q H+ V+ H+P ++ ++ Q Q QQ
Sbjct: 462 QHPQQQQQQQQYHQMPPQPQHSPYPQQQQMHHQMVQ-HSPHHYQQQQQQQQYQQQHQQSP 520
Query: 435 VHEGWERT 458
++++
Sbjct: 521 QFPSYQQS 528
>Z69787-2|CAA93635.2| 474|Caenorhabditis elegans Hypothetical
protein C44C10.3 protein.
Length = 474
Score = 27.1 bits (57), Expect = 8.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -1
Query: 410 LLKPFIVFTNSWWSMSPY 357
LL PF+ + N+WW + Y
Sbjct: 411 LLAPFLTYANTWWPPAVY 428
>AF000196-10|AAC24250.1| 172|Caenorhabditis elegans Hypothetical
protein B0041.1 protein.
Length = 172
Score = 27.1 bits (57), Expect = 8.2
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 307 NQKYEMGLVSYKLGMNKYGDMLHHEFVKTMNGFNK 411
NQ +SY GMN + D L F K +N F+K
Sbjct: 125 NQSLSSIKLSYHFGMNSFIDSLLSIFKKNLNIFSK 159
>AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 4 protein.
Length = 339
Score = 27.1 bits (57), Expect = 8.2
Identities = 20/66 (30%), Positives = 26/66 (39%), Gaps = 3/66 (4%)
Frame = -2
Query: 445 PSCTDSCCVWQFCXXXXXXXRTRGGACLRTCSCPACKKRGPFRTSGCVWR*---CACAQR 275
P C SC Q C AC ++CS +C P + C+ C+C Q
Sbjct: 271 PECQQSC--QQQCVQQQQPMIQCAPACTQSCS-QSCSIAQPAQMP-CMTESINSCSCQQN 326
Query: 274 ISSCGN 257
S CGN
Sbjct: 327 YSPCGN 332
>AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical
protein Y5H2A.4 protein.
Length = 558
Score = 27.1 bits (57), Expect = 8.2
Identities = 20/66 (30%), Positives = 26/66 (39%), Gaps = 3/66 (4%)
Frame = -2
Query: 445 PSCTDSCCVWQFCXXXXXXXRTRGGACLRTCSCPACKKRGPFRTSGCVWR*---CACAQR 275
P C SC Q C AC ++CS +C P + C+ C+C Q
Sbjct: 491 PECQQSC--QQQCVQQQQPMIQCAPACTQSCS-QSCSIAQPAQMP-CMTESINSCSCQQN 546
Query: 274 ISSCGN 257
S CGN
Sbjct: 547 YSPCGN 552
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,147,476
Number of Sequences: 27780
Number of extensions: 224190
Number of successful extensions: 843
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 840
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1028310386
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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