Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0085
(603 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113545-1|AAM29550.1| 878|Drosophila melanogaster RE62270p pro... 233 2e-61
AF191563-1|AAF05719.1| 879|Drosophila melanogaster coatomer pro... 231 7e-61
AE014297-4756|AAF57160.1| 879|Drosophila melanogaster CG1528-PA... 231 7e-61
BT001628-1|AAN71383.1| 883|Drosophila melanogaster RE37840p pro... 229 2e-60
AE014297-4757|AAN14275.1| 883|Drosophila melanogaster CG1528-PB... 229 2e-60
BT010031-1|AAQ22500.1| 1159|Drosophila melanogaster RE01344p pro... 40 0.003
AJ011778-1|CAA09771.1| 1160|Drosophila melanogaster Beta3 protei... 40 0.003
AF247194-1|AAF71924.1| 1160|Drosophila melanogaster ruby protein. 40 0.003
AE014298-634|AAF45950.1| 1160|Drosophila melanogaster CG11427-PA... 40 0.003
BT011104-1|AAR82770.1| 389|Drosophila melanogaster LP09056p pro... 28 8.5
AY484405-1|AAR86939.1| 857|Drosophila melanogaster reverse tran... 28 8.5
AY484404-1|AAR86938.1| 857|Drosophila melanogaster reverse tran... 28 8.5
AE014297-2085|AAN13677.1| 1570|Drosophila melanogaster CG4699-PC... 28 8.5
AE014297-2084|AAF55225.1| 1570|Drosophila melanogaster CG4699-PB... 28 8.5
AE014297-2083|AAF55226.1| 1570|Drosophila melanogaster CG4699-PA... 28 8.5
>AY113545-1|AAM29550.1| 878|Drosophila melanogaster RE62270p
protein.
Length = 878
Score = 233 bits (569), Expect = 2e-61
Identities = 112/150 (74%), Positives = 130/150 (86%)
Frame = +1
Query: 61 SIMKARRDGKEEDSNVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELT 240
S + + D ++ SN +QNL+KT++LQE R FN TPV+PRKCIHILTKILYL+NQGE+L
Sbjct: 3 SFRREKDDEEDGPSNAYQNLEKTSVLQETRTFNETPVNPRKCIHILTKILYLINQGEQLV 62
Query: 241 TQEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRP 420
+EATD FFA TKLFQSKDVVLRR+VYL IKELS +A+DVIIVTSSLTKDMTGK+D YR
Sbjct: 63 AREATDCFFAMTKLFQSKDVVLRRMVYLGIKELSSIAEDVIIVTSSLTKDMTGKEDLYRA 122
Query: 421 AAIRALCSITDSTMLQAIERYMKQAIVDKN 510
AAIRALCSITD+TMLQA+ERYMKQ IVDKN
Sbjct: 123 AAIRALCSITDNTMLQAVERYMKQCIVDKN 152
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +3
Query: 510 SCSRICRTGLRFASVSTVPDLVRRWINEAQE 602
SC+ + + LR A+ T D+V+RW NEAQE
Sbjct: 156 SCAALV-SSLRLAN--TAGDVVKRWANEAQE 183
>AF191563-1|AAF05719.1| 879|Drosophila melanogaster coatomer
protein gamma subunit protein.
Length = 879
Score = 231 bits (564), Expect = 7e-61
Identities = 114/148 (77%), Positives = 128/148 (86%), Gaps = 3/148 (2%)
Frame = +1
Query: 76 RRDGKEED---SNVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQ 246
R EED SN +QNL+KT++LQE R FN TPV+PRKCIHILTKILYL+NQGE+L +
Sbjct: 6 REKDDEEDAGPSNAYQNLEKTSVLQETRTFNETPVNPRKCIHILTKILYLINQGEQLVAR 65
Query: 247 EATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAA 426
EATD FFA TKLFQSKDVVLRR+VYL IKELS +A+DVIIVTSSLTKDMTGK+D YR AA
Sbjct: 66 EATDCFFAMTKLFQSKDVVLRRMVYLGIKELSSIAEDVIIVTSSLTKDMTGKEDLYRAAA 125
Query: 427 IRALCSITDSTMLQAIERYMKQAIVDKN 510
IRALCSITD+TMLQA+ERYMKQ IVDKN
Sbjct: 126 IRALCSITDNTMLQAVERYMKQCIVDKN 153
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +3
Query: 510 SCSRICRTGLRFASVSTVPDLVRRWINEAQE 602
SC+ + + LR A+ T D+V+RW NEAQE
Sbjct: 157 SCAALV-SSLRLAN--TAGDVVKRWANEAQE 184
>AE014297-4756|AAF57160.1| 879|Drosophila melanogaster CG1528-PA,
isoform A protein.
Length = 879
Score = 231 bits (564), Expect = 7e-61
Identities = 114/148 (77%), Positives = 128/148 (86%), Gaps = 3/148 (2%)
Frame = +1
Query: 76 RRDGKEED---SNVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQ 246
R EED SN +QNL+KT++LQE R FN TPV+PRKCIHILTKILYL+NQGE+L +
Sbjct: 6 REKDDEEDAGPSNAYQNLEKTSVLQETRTFNETPVNPRKCIHILTKILYLINQGEQLVAR 65
Query: 247 EATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAA 426
EATD FFA TKLFQSKDVVLRR+VYL IKELS +A+DVIIVTSSLTKDMTGK+D YR AA
Sbjct: 66 EATDCFFAMTKLFQSKDVVLRRMVYLGIKELSSIAEDVIIVTSSLTKDMTGKEDLYRAAA 125
Query: 427 IRALCSITDSTMLQAIERYMKQAIVDKN 510
IRALCSITD+TMLQA+ERYMKQ IVDKN
Sbjct: 126 IRALCSITDNTMLQAVERYMKQCIVDKN 153
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +3
Query: 510 SCSRICRTGLRFASVSTVPDLVRRWINEAQE 602
SC+ + + LR A+ T D+V+RW NEAQE
Sbjct: 157 SCAALV-SSLRLAN--TAGDVVKRWANEAQE 184
>BT001628-1|AAN71383.1| 883|Drosophila melanogaster RE37840p
protein.
Length = 883
Score = 229 bits (561), Expect = 2e-60
Identities = 110/137 (80%), Positives = 124/137 (90%)
Frame = +1
Query: 100 SNVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQEATDIFFATTK 279
SN +QNL+KT++LQE R FN TPV+PRKCIHILTKILYL+NQGE+L +EATD FFA TK
Sbjct: 21 SNAYQNLEKTSVLQETRTFNETPVNPRKCIHILTKILYLINQGEQLVAREATDCFFAMTK 80
Query: 280 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITDST 459
LFQSKDVVLRR+VYL IKELS +A+DVIIVTSSLTKDMTGK+D YR AAIRALCSITD+T
Sbjct: 81 LFQSKDVVLRRMVYLGIKELSSIAEDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDNT 140
Query: 460 MLQAIERYMKQAIVDKN 510
MLQA+ERYMKQ IVDKN
Sbjct: 141 MLQAVERYMKQCIVDKN 157
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +3
Query: 510 SCSRICRTGLRFASVSTVPDLVRRWINEAQE 602
SC+ + + LR A+ T D+V+RW NEAQE
Sbjct: 161 SCAALV-SSLRLAN--TAGDVVKRWANEAQE 188
>AE014297-4757|AAN14275.1| 883|Drosophila melanogaster CG1528-PB,
isoform B protein.
Length = 883
Score = 229 bits (561), Expect = 2e-60
Identities = 110/137 (80%), Positives = 124/137 (90%)
Frame = +1
Query: 100 SNVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQEATDIFFATTK 279
SN +QNL+KT++LQE R FN TPV+PRKCIHILTKILYL+NQGE+L +EATD FFA TK
Sbjct: 21 SNAYQNLEKTSVLQETRTFNETPVNPRKCIHILTKILYLINQGEQLVAREATDCFFAMTK 80
Query: 280 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITDST 459
LFQSKDVVLRR+VYL IKELS +A+DVIIVTSSLTKDMTGK+D YR AAIRALCSITD+T
Sbjct: 81 LFQSKDVVLRRMVYLGIKELSSIAEDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDNT 140
Query: 460 MLQAIERYMKQAIVDKN 510
MLQA+ERYMKQ IVDKN
Sbjct: 141 MLQAVERYMKQCIVDKN 157
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +3
Query: 510 SCSRICRTGLRFASVSTVPDLVRRWINEAQE 602
SC+ + + LR A+ T D+V+RW NEAQE
Sbjct: 161 SCAALV-SSLRLAN--TAGDVVKRWANEAQE 188
>BT010031-1|AAQ22500.1| 1159|Drosophila melanogaster RE01344p
protein.
Length = 1159
Score = 39.9 bits (89), Expect = 0.003
Identities = 22/91 (24%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Frame = +1
Query: 244 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 420
++A+D+F A K SK++ +++LVY+ + + QD+ +++ S+ + + + R
Sbjct: 55 RDASDLFPAVVKNVVSKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRA 114
Query: 421 AAIRALCSITDSTMLQAIERYMKQAIVDKNP 513
+A+R L SI S ++ + ++ + D +P
Sbjct: 115 SALRVLSSIRVSMIVPIVMLAIRDSAADLSP 145
>AJ011778-1|CAA09771.1| 1160|Drosophila melanogaster Beta3 protein
protein.
Length = 1160
Score = 39.9 bits (89), Expect = 0.003
Identities = 22/91 (24%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Frame = +1
Query: 244 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 420
++A+D+F A K SK++ +++LVY+ + + QD+ +++ S+ + + + R
Sbjct: 75 RDASDLFPAVVKNVVSKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRA 134
Query: 421 AAIRALCSITDSTMLQAIERYMKQAIVDKNP 513
+A+R L SI S ++ + ++ + D +P
Sbjct: 135 SALRVLSSIRVSMIVPIVMLAIRDSAADLSP 165
>AF247194-1|AAF71924.1| 1160|Drosophila melanogaster ruby protein.
Length = 1160
Score = 39.9 bits (89), Expect = 0.003
Identities = 22/91 (24%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Frame = +1
Query: 244 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 420
++A+D+F A K SK++ +++LVY+ + + QD+ +++ S+ + + + R
Sbjct: 75 RDASDLFPAVVKNVVSKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRA 134
Query: 421 AAIRALCSITDSTMLQAIERYMKQAIVDKNP 513
+A+R L SI S ++ + ++ + D +P
Sbjct: 135 SALRVLSSIRVSMIVPIVMLAIRDSAADLSP 165
>AE014298-634|AAF45950.1| 1160|Drosophila melanogaster CG11427-PA
protein.
Length = 1160
Score = 39.9 bits (89), Expect = 0.003
Identities = 22/91 (24%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Frame = +1
Query: 244 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 420
++A+D+F A K SK++ +++LVY+ + + QD+ +++ S+ + + + R
Sbjct: 75 RDASDLFPAVVKNVVSKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRA 134
Query: 421 AAIRALCSITDSTMLQAIERYMKQAIVDKNP 513
+A+R L SI S ++ + ++ + D +P
Sbjct: 135 SALRVLSSIRVSMIVPIVMLAIRDSAADLSP 165
>BT011104-1|AAR82770.1| 389|Drosophila melanogaster LP09056p
protein.
Length = 389
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 498 NSLFHVPLNSLQHCTVCDATQSSNGGRS 415
+ L H L +Q+ DAT+SS+GG S
Sbjct: 49 SGLLHTELREVQNAIDSDATESSSGGES 76
>AY484405-1|AAR86939.1| 857|Drosophila melanogaster reverse
transcriptase protein.
Length = 857
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +1
Query: 100 SNVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILY 213
SN N D+TT+LQ+ +++N H + +HI+ Y
Sbjct: 785 SNHTPNFDETTILQQEQHYNKR--HTLEMLHIINTPTY 820
>AY484404-1|AAR86938.1| 857|Drosophila melanogaster reverse
transcriptase protein.
Length = 857
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +1
Query: 100 SNVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILY 213
SN N D+TT+LQ+ +++N H + +HI+ Y
Sbjct: 785 SNHTPNFDETTILQQEQHYNKR--HTLEMLHIINTPTY 820
>AE014297-2085|AAN13677.1| 1570|Drosophila melanogaster CG4699-PC,
isoform C protein.
Length = 1570
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 498 NSLFHVPLNSLQHCTVCDATQSSNGGRS 415
+ L H L +Q+ DAT+SS+GG S
Sbjct: 596 SGLLHTELREVQNAIDSDATESSSGGES 623
>AE014297-2084|AAF55225.1| 1570|Drosophila melanogaster CG4699-PB,
isoform B protein.
Length = 1570
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 498 NSLFHVPLNSLQHCTVCDATQSSNGGRS 415
+ L H L +Q+ DAT+SS+GG S
Sbjct: 596 SGLLHTELREVQNAIDSDATESSSGGES 623
>AE014297-2083|AAF55226.1| 1570|Drosophila melanogaster CG4699-PA,
isoform A protein.
Length = 1570
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 498 NSLFHVPLNSLQHCTVCDATQSSNGGRS 415
+ L H L +Q+ DAT+SS+GG S
Sbjct: 596 SGLLHTELREVQNAIDSDATESSSGGES 623
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,906,785
Number of Sequences: 53049
Number of extensions: 556288
Number of successful extensions: 1249
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1249
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2462276481
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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