Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0082
         (300 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006CB5FB Cluster: hypothetical protein TTHERM_0053...    31   5.1  
UniRef50_A6PNQ1 Cluster: Carbohydrate-binding, CenC domain prote...    31   5.1  
UniRef50_A7SGD2 Cluster: Predicted protein; n=1; Nematostella ve...    31   5.1  
UniRef50_Q44MI2 Cluster: Hemolysin-type calcium-binding region; ...    31   6.7  
UniRef50_UPI0000D56639 Cluster: PREDICTED: similar to CG32436-PA...    30   8.9  
UniRef50_O43053 Cluster: Probable dolichyl pyrophosphate Man9Glc...    30   8.9  

>UniRef50_UPI00006CB5FB Cluster: hypothetical protein
           TTHERM_00537410; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00537410 - Tetrahymena
           thermophila SB210
          Length = 1332

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +3

Query: 195 AENDDFLDSIDNNHLEGTNGSMNMTDNSLGG 287
           A +  FLD+  NNH +G +GS  + + SLGG
Sbjct: 627 AMDQAFLDNSGNNHKKGNSGSNQLGNFSLGG 657


>UniRef50_A6PNQ1 Cluster: Carbohydrate-binding, CenC domain protein
            precursor; n=2; Victivallis vadensis ATCC BAA-548|Rep:
            Carbohydrate-binding, CenC domain protein precursor -
            Victivallis vadensis ATCC BAA-548
          Length = 1348

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 61   FENCPICCYELYYLSRSTIS*W 126
            F N P+ CYE Y  +R T + W
Sbjct: 955  FHNAPVACYEFYTFARETFAGW 976


>UniRef50_A7SGD2 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 154

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = +1

Query: 70  CPICCYELYYLSRS--TIS*WIWLPRSKVISKYIIHD 174
           C IC YE Y+L R+  T   W+  PRS+   +YII D
Sbjct: 43  CEICKYE-YHLQRTPKTFRQWLKNPRSRTERRYIIGD 78


>UniRef50_Q44MI2 Cluster: Hemolysin-type calcium-binding region; n=1;
            Chlorobium limicola DSM 245|Rep: Hemolysin-type
            calcium-binding region - Chlorobium limicola DSM 245
          Length = 2671

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 3/35 (8%)
 Frame = +3

Query: 198  ENDDFLDSIDNNHLEGTNGSMNM---TDNSLGGGD 293
            E DD L ++DNN ++G  G+ ++    DNS+ GG+
Sbjct: 1784 EGDDLLSALDNNTMDGGAGNDSLYGDYDNSMQGGE 1818


>UniRef50_UPI0000D56639 Cluster: PREDICTED: similar to CG32436-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG32436-PA - Tribolium castaneum
          Length = 1716

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +3

Query: 195 AENDDFLDSIDNNHLEGTNGSMNMTD 272
           A ND FL+S D  HL G N  + +TD
Sbjct: 373 AGNDLFLESADTQHLHGDNVELKITD 398


>UniRef50_O43053 Cluster: Probable dolichyl pyrophosphate
           Man9GlcNAc2 alpha-1,3- glucosyltransferase; n=1;
           Schizosaccharomyces pombe|Rep: Probable dolichyl
           pyrophosphate Man9GlcNAc2 alpha-1,3- glucosyltransferase
           - Schizosaccharomyces pombe (Fission yeast)
          Length = 506

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -1

Query: 102 QVIQFITTNRTVFKLQSVFELHKITI*CKIFT 7
           +V  F  T  TVFK++ VF LH++ +   IFT
Sbjct: 293 KVANFWCTLNTVFKIREVFTLHQLQVISLIFT 324


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 281,037,283
Number of Sequences: 1657284
Number of extensions: 4938565
Number of successful extensions: 12327
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12304
length of database: 575,637,011
effective HSP length: 76
effective length of database: 449,683,427
effective search space used: 10342718821
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)