Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0082
(300 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 25 0.27
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 23 0.61
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 1.4
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 21 2.5
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 21 2.5
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 21 2.5
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 21 3.3
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 21 3.3
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 21 4.3
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 20 7.6
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 20 7.6
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 20 7.6
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 24.6 bits (51), Expect = 0.27
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -2
Query: 71 QFSNYSQYSNYIKSQFDARYL 9
++SNY+ Y+NY K + Y+
Sbjct: 90 KYSNYNNYNNYNKKLYYKNYI 110
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 23.4 bits (48), Expect = 0.61
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -3
Query: 157 SRSLYFSVTKSTMKSLTYSGNTV 89
SRSLY+ TK MKS Y N V
Sbjct: 273 SRSLYYVNTKPFMKS-EYGANNV 294
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 22.2 bits (45), Expect = 1.4
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = -2
Query: 71 QFSNYSQYSNYIKSQFD 21
++SNY+ Y+NY + ++
Sbjct: 323 KYSNYNNYNNYNNNNYN 339
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 21.4 bits (43), Expect = 2.5
Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Frame = -3
Query: 172 HELYI----SRSLYFSVTKSTMKSLTYSGNTVHNNK*DSFQITVSIR 44
H LY S +LY+ T+S MKS + + D F ++++
Sbjct: 262 HNLYYNSPSSENLYYVNTESLMKSENQGNDVQYERVQDVFDSQLTVK 308
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 2.5
Identities = 6/20 (30%), Positives = 13/20 (65%)
Frame = -2
Query: 71 QFSNYSQYSNYIKSQFDARY 12
++SNY+ Y+N + ++ Y
Sbjct: 90 KYSNYNNYNNNYNNNYNNNY 109
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 2.5
Identities = 6/20 (30%), Positives = 13/20 (65%)
Frame = -2
Query: 71 QFSNYSQYSNYIKSQFDARY 12
++SNY+ Y+N + ++ Y
Sbjct: 90 KYSNYNNYNNNYNNNYNNNY 109
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 21.0 bits (42), Expect = 3.3
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 186 VEMAENDDFLDSIDNNHLEGTNGSMNMTDNSL 281
+E+ E+ + IDN L+ +G +T NSL
Sbjct: 531 IEIPEDLKYFYEIDNWMLDLNSGLNKITRNSL 562
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 21.0 bits (42), Expect = 3.3
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 186 VEMAENDDFLDSIDNNHLEGTNGSMNMTDNSL 281
+E+ E+ + IDN L+ +G +T NSL
Sbjct: 531 IEIPEDLKYFYEIDNWMLDLNSGLNKITRNSL 562
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 20.6 bits (41), Expect = 4.3
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 192 MAENDDFLDSIDNNHLEGTNG 254
+A ND+ L+SI +GT G
Sbjct: 177 LATNDNILESISYVKDDGTEG 197
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 19.8 bits (39), Expect = 7.6
Identities = 6/22 (27%), Positives = 12/22 (54%)
Frame = -2
Query: 68 FSNYSQYSNYIKSQFDARYLRI 3
++NY+ Y+N + + Y I
Sbjct: 334 YNNYNNYNNNYNNNYKKLYYNI 355
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 19.8 bits (39), Expect = 7.6
Identities = 6/9 (66%), Positives = 9/9 (100%)
Frame = -3
Query: 34 NHNLMQDIY 8
N+NL++DIY
Sbjct: 117 NYNLLEDIY 125
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 19.8 bits (39), Expect = 7.6
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -1
Query: 240 PNDCCQSSLKNHH 202
PN Q SL +HH
Sbjct: 275 PNSSLQPSLASHH 287
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,481
Number of Sequences: 438
Number of extensions: 1682
Number of successful extensions: 30
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used: 6244050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
- SilkBase 1999-2023 -