Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0076
(662 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0022 - 20291787-20291864,20291989-20292010,20292269-202932... 31 0.82
05_03_0235 - 10747649-10748118,10748226-10748314,10748477-107485... 30 1.9
04_04_1477 + 33873976-33874080,33874433-33874544,33874777-338748... 30 1.9
02_05_1339 + 35793795-35794922,35795009-35795233,35795314-35795460 30 1.9
03_06_0235 + 32539025-32539886,32540330-32540473,32540595-325407... 29 2.5
12_01_0450 - 3552701-3552865,3552971-3553195,3553306-3553473,355... 29 4.4
11_01_0449 - 3473662-3475049,3476026-3476128,3476215-3476439,347... 29 4.4
01_06_0514 + 29955129-29955796,29955903-29956023 29 4.4
10_05_0052 - 8586577-8588007 28 5.8
09_01_0112 + 1737438-1737777,1738441-1738511,1738974-1739052,174... 28 5.8
08_02_0812 - 21444112-21444273,21444374-21444488,21445369-214454... 28 5.8
04_04_0824 - 28399144-28399385,28400193-28400312,28400422-284004... 28 5.8
03_01_0617 + 4532651-4532893,4534713-4534939,4535077-4535150,453... 28 5.8
02_05_0340 + 28105222-28105960,28106844-28106987,28107083-281072... 28 5.8
02_04_0293 + 21644415-21644533,21644686-21645118 28 5.8
09_02_0362 + 7860088-7860197,7861606-7861636,7861738-7861801,786... 28 7.6
06_01_0185 - 1437693-1437834,1437969-1438078,1438214-1438264,143... 28 7.6
05_05_0034 - 21741148-21741275,21741890-21741928,21742007-217421... 28 7.6
>09_06_0022 -
20291787-20291864,20291989-20292010,20292269-20293218,
20293339-20293629
Length = 446
Score = 31.1 bits (67), Expect = 0.82
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Frame = +2
Query: 410 RHDGCGTGTNRGGRHE*SRPGCAAPGKPDAAPRHAASGPDIPAWKSSAISSLWTISR--- 580
R D GG + + G A KP+AA H A G + ++S S W I R
Sbjct: 331 RDDAAAAADEDGGGEDQAEHG-GADVKPEAADPHPAGGGGGSSTEASPESHPWPIYRPTP 389
Query: 581 LWHGIRP 601
++H +RP
Sbjct: 390 MYHAVRP 396
>05_03_0235 -
10747649-10748118,10748226-10748314,10748477-10748574,
10748934-10749046,10749107-10749200,10749557-10749589,
10749734-10749851,10750110-10750210,10751036-10751233,
10751337-10751471,10751752-10751830,10753650-10753738,
10753835-10753987,10754100-10754285
Length = 651
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 6/45 (13%)
Frame = -1
Query: 530 YLARRRHDVGRH------RACRVRHTLGGFTHVYRRGLSRSRTHH 414
Y ARRRH GRH R H+ G H Y G + R HH
Sbjct: 524 YRARRRHQKGRHHRHHHDHRHRHGHSHGDHHHHYHGGHHQRRRHH 568
>04_04_1477 + 33873976-33874080,33874433-33874544,33874777-33874874,
33875548-33876261,33876348-33876518,33876955-33877011,
33877096-33878718
Length = 959
Score = 29.9 bits (64), Expect = 1.9
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = +3
Query: 168 DGHPSSSGMTHSVSSLLGGIQSKSRKNDVSLTAPVAP-VENSNPRMMNRLPMPGMNQDSP 344
D P S T + S + +S K S++ ++P V+++NPR + LPM QDS
Sbjct: 872 DQEPRISNST-PLPSYMQFTESARAKASASVSPKLSPDVQDNNPRKRHSLPMTNGKQDS- 929
Query: 345 MTSPHAFNNKSASAMSPHLTQSGMMGAGPGQT 440
SP +S+S ++ +G + P +
Sbjct: 930 --SPRM--QRSSSQAQQNVKSNGAVPVPPNSS 957
>02_05_1339 + 35793795-35794922,35795009-35795233,35795314-35795460
Length = 499
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -3
Query: 588 CHSLEIVHNELMAEDFQAGISGPEAA*RGAASGLPGAAHPGRLYS 454
CHSL ++H +L E+F S ++ + GL PG+++S
Sbjct: 143 CHSLGVMHRDLKPENFLLKESSSSSSLKAIDFGLSVFFKPGQVFS 187
>03_06_0235 +
32539025-32539886,32540330-32540473,32540595-32540747,
32540871-32540986,32541254-32541421,32541534-32541758,
32541884-32542015
Length = 599
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -3
Query: 588 CHSLEIVHNELMAEDFQAGISGPEAA*RGAASGLPGAAHPGRLYS 454
CHS+ ++H +L E+F EAA + GL PG++++
Sbjct: 248 CHSMGVMHRDLKPENFLFADQTEEAALKTIDFGLSIFFRPGQVFT 292
>12_01_0450 -
3552701-3552865,3552971-3553195,3553306-3553473,
3554514-3554629,3554735-3554887,3554978-3555121,
3556667-3557276
Length = 526
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -3
Query: 588 CHSLEIVHNELMAEDFQAGISGPEAA*RGAASGLPGAAHPGRLYS 454
CHSL ++H +L E+F + +A + GL PG +S
Sbjct: 164 CHSLGVMHRDLKPENFLFASTAEDAPLKATDFGLSVFYKPGDKFS 208
>11_01_0449 -
3473662-3475049,3476026-3476128,3476215-3476439,
3476689-3476856,3477414-3477529,3477640-3477792,
3477879-3478022,3478980-3479583
Length = 966
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -3
Query: 588 CHSLEIVHNELMAEDFQAGISGPEAA*RGAASGLPGAAHPGRLYS 454
CHSL ++H +L E+F + +A + GL PG +S
Sbjct: 162 CHSLGVMHRDLKPENFLFASAAEDAPLKATDFGLSMFYKPGDKFS 206
>01_06_0514 + 29955129-29955796,29955903-29956023
Length = 262
Score = 28.7 bits (61), Expect = 4.4
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Frame = +3
Query: 294 PRMMNRLPMPGMNQDSP-----MTSPHAFNNKSASAMSPHLTQSGMMGAGPGQ 437
P + RL G+N P TSP F N S+S S +L SG++G Q
Sbjct: 23 PGLFVRLSSKGLNAVDPDSAWSPTSPLDFKNLSSSTGSTNLKSSGLLGVEADQ 75
>10_05_0052 - 8586577-8588007
Length = 476
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -3
Query: 456 SCLPPRFVPVPHPSCRF 406
S +PPRFVP+P S RF
Sbjct: 122 SVVPPRFVPLPSASSRF 138
>09_01_0112 +
1737438-1737777,1738441-1738511,1738974-1739052,
1741559-1741641,1741733-1741784,1742038-1742105,
1742279-1742345,1742426-1742505,1742576-1742640,
1742785-1742847,1743271-1743427,1743511-1743588,
1743677-1744219,1744321-1744497,1744534-1744788,
1745270-1745329,1745874-1745888,1746123-1746135,
1746819-1746934
Length = 793
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 237 SRKNDVSLTAPVAPVENSNPRMMNRLPMPGMNQDSPMTSPHAFNN-KSASAMSP 395
S ++D +L + P N + +P + SP ++PH FNN S + M+P
Sbjct: 313 SPRSDAALV--IRPTANLDEPRGRHMPPDSWHPSSPRSAPHQFNNFGSDNPMAP 364
>08_02_0812 -
21444112-21444273,21444374-21444488,21445369-21445487,
21446589-21446757,21447082-21447233,21447349-21447492,
21447575-21447687,21448265-21448316,21448408-21448494
Length = 370
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +2
Query: 461 SRPGCAAPGKPDAAPRHAASG 523
SRPG APGK +A PR AA G
Sbjct: 24 SRPGSPAPGK-NAFPRRAAGG 43
>04_04_0824 -
28399144-28399385,28400193-28400312,28400422-28400453,
28400531-28400625,28400713-28400786,28400883-28401018,
28401096-28401333,28401508-28401555,28401593-28401780,
28401862-28401983,28402061-28402226,28402321-28402443,
28403068-28403139,28403244-28403351,28404212-28404328,
28404458-28404596,28404702-28404808,28404904-28405013,
28405141-28405274,28405348-28405497,28405571-28405791,
28405868-28406677,28410261-28410473
Length = 1254
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -3
Query: 534 GISGPEAA*RGAASGLPGAAHPGRLYSCLPPRFVPVP 424
G GP+A+ RG + PG L C+P F PVP
Sbjct: 46 GPHGPQASVRGPSRATPGCVLGTALQFCVP--FFPVP 80
>03_01_0617 + 4532651-4532893,4534713-4534939,4535077-4535150,
4535753-4535809,4535940-4536280,4536979-4537047,
4537152-4537219,4537404-4539569,4540101-4540178,
4540326-4540437,4540722-4540772,4540886-4540936
Length = 1178
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +3
Query: 228 QSKSRKNDVSLTAPVAPVENSNPRMMNRLPMPGMNQDSPMTSPHAF 365
Q + + SL +A V+NS P M NR +QD SP F
Sbjct: 881 QFERNSSSKSLDGKLANVDNSIPSMANRKGSLSSSQDQRKPSPREF 926
>02_05_0340 +
28105222-28105960,28106844-28106987,28107083-28107235,
28107418-28107533,28107819-28107986,28108792-28109016,
28110445-28110483,28110497-28110592
Length = 559
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = -3
Query: 588 CHSLEIVHNELMAEDFQAGISGPEAA*RGAASGLPGAAHPGRLYS 454
CHSL ++H +L E+F + + + GL PG++++
Sbjct: 207 CHSLGVIHRDLKPENFLLANKDDDLSLKAIDFGLSVFFKPGQVFT 251
>02_04_0293 + 21644415-21644533,21644686-21645118
Length = 183
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +2
Query: 434 TNRGGRHE*SRPG-CAAPGKPDAAPRHAASGPD 529
+ RGG SR CA PGKP P+ AAS D
Sbjct: 102 SRRGGGGGCSRSAFCAEPGKPVKKPKAAASDDD 134
>09_02_0362 +
7860088-7860197,7861606-7861636,7861738-7861801,
7861922-7862052,7863575-7863784,7863891-7863956,
7864868-7865075,7866270-7866325,7866406-7867128,
7868246-7868299,7868667-7868695,7869501-7869585,
7870032-7870202,7870246-7870827
Length = 839
Score = 27.9 bits (59), Expect = 7.6
Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 4/97 (4%)
Frame = +3
Query: 177 PSSSGMTHSVSSLLGGIQSKSRKNDVSLTAPVAPVENSNPRMMNRLPMPGMNQDSPMTSP 356
P + +VSS LGGIQS ++ ++ P PV +L G+N + M S
Sbjct: 412 PITGNSNIAVSSSLGGIQS-----NIGISGP--PVTQGGSMGSTQLGQGGINTNQNMISS 464
Query: 357 HAFNN-KSASAMSP---HLTQSGMMGAGPGQTAAVDM 455
SA AM P Q+G+ G ++A++M
Sbjct: 465 LGTTTVSSAPAMMPTPGMAQQAGVNSLGVTNSSAMNM 501
>06_01_0185 -
1437693-1437834,1437969-1438078,1438214-1438264,
1438877-1439122,1439244-1439315,1439614-1439648,
1439755-1439845,1440546-1440610,1440733-1440813,
1441020-1441137,1441535-1441627,1441865-1441997,
1442471-1442503,1443264-1443343,1443444-1443549,
1443621-1443795,1443884-1443980,1444819-1445251,
1445329-1445459,1446052-1446341,1446429-1447002
Length = 1051
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = -3
Query: 588 CHSLEIVHNELMAEDFQAGISGPEAA*RGAASGLPGAAHPGRLYS 454
CHS IVH +L E+ P + + A GL PGR S
Sbjct: 152 CHSKGIVHRDLKPENILLVSKSPSSPIKLADFGLATYIQPGRSLS 196
>05_05_0034 - 21741148-21741275,21741890-21741928,21742007-21742121,
21742227-21742292,21743213-21743371,21743573-21743609,
21743757-21744194,21744735-21744817,21744920-21744956,
21745146-21745214,21745316-21745407,21745481-21745565,
21745903-21745982,21746327-21746724,21746813-21747717,
21747825-21747915,21748617-21750680,21750681-21750749,
21750850-21751273,21751644-21751763
Length = 1832
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 150 NESLSNDGHPSSSGMTHSVSSLLGGI 227
+ES+ G P SSGM H+ + +GGI
Sbjct: 1067 SESILQPGLPLSSGMDHAPRNFVGGI 1092
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,855,678
Number of Sequences: 37544
Number of extensions: 362006
Number of successful extensions: 1321
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1321
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1667659452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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