Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0076
         (662 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           31   0.025
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    27   0.53 
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    27   0.53 
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    24   4.9  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            23   6.5  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   6.5  

>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 31.5 bits (68), Expect = 0.025
 Identities = 30/98 (30%), Positives = 44/98 (44%)
 Frame = +3

Query: 150 NESLSNDGHPSSSGMTHSVSSLLGGIQSKSRKNDVSLTAPVAPVENSNPRMMNRLPMPGM 329
           N  L+N G   S+G+  S SS  GG    S    +           ++P M N  P  GM
Sbjct: 302 NAQLTNGG---SNGLLGS-SSQAGGSGGSSGGGLLGTDGSQYYTSAADPSMGND-PQTGM 356

Query: 330 NQDSPMTSPHAFNNKSASAMSPHLTQSGMMGAGPGQTA 443
              + M+     +  + S +SPHL Q+G + A  GQ+A
Sbjct: 357 GGPASMSG----SLSATSPVSPHLQQNGYVSASNGQSA 390


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 27.1 bits (57), Expect = 0.53
 Identities = 12/43 (27%), Positives = 26/43 (60%)
 Frame = +3

Query: 279  VENSNPRMMNRLPMPGMNQDSPMTSPHAFNNKSASAMSPHLTQ 407
            VEN +P + ++L +  MN+++   S  A +++SA +   + +Q
Sbjct: 1743 VENDDPELSSQLMVDSMNENASNCSWEAVDDRSAPSSGANSSQ 1785


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 27.1 bits (57), Expect = 0.53
 Identities = 12/43 (27%), Positives = 26/43 (60%)
 Frame = +3

Query: 279  VENSNPRMMNRLPMPGMNQDSPMTSPHAFNNKSASAMSPHLTQ 407
            VEN +P + ++L +  MN+++   S  A +++SA +   + +Q
Sbjct: 1744 VENDDPELSSQLMVDSMNENASNCSWEAVDDRSAPSSGANSSQ 1786


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 14/52 (26%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
 Frame = +3

Query: 321 PGMNQDSPMTSPHAFNNKSASAMSPHLTQSGMMGAGPGQTAAVD-MSKAAQG 473
           PG+N+      P   +N      +  +  SGM      ++A+VD  S  A G
Sbjct: 6   PGVNRPPGSHRPPGLSNPPTCTSAKMMASSGMSTRASARSASVDCRSSLASG 57


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -3

Query: 537 AGISGPEAA*RGAASGLPGAAHPGRLYSCLPPRFVPVP 424
           AG  G +    G   G P    PG     +PP+F+P P
Sbjct: 516 AGYDGRDLT--GGPLGPPPPPPPGGAVLNIPPQFLPPP 551


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = -3

Query: 645 PHCRRNLRRKARRDTGRIP-CHS 580
           P  RRN RR++ R  GR P C S
Sbjct: 251 PPSRRNPRRRSPRSGGRWPSCRS 273


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 611,681
Number of Sequences: 2352
Number of extensions: 13265
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)