Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0075
(740 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0756 + 27469002-27469107,27469200-27469369,27470210-274710... 33 0.18
06_03_1363 - 29576265-29577575 32 0.55
07_01_0586 - 4354613-4354996,4355537-4355662,4355752-4355827,435... 31 1.3
01_01_0537 + 3931429-3932316,3937245-3937553,3937646-3937912 30 1.7
09_04_0736 - 19815427-19815642,19815782-19816903,19817006-198177... 29 2.9
09_04_0615 + 18972227-18972250,18972293-18972397,18973492-189735... 29 3.9
05_04_0319 + 20171486-20171800,20171882-20171956,20172160-201721... 29 3.9
03_05_0953 + 29111030-29111105,29112250-29113520 29 3.9
02_04_0635 - 24646603-24647337 29 3.9
01_01_0862 + 6714041-6714358,6714462-6714603,6715511-6715735,671... 29 3.9
09_04_0203 - 15556064-15556561,15557537-15557581,15557852-155582... 29 5.1
06_03_0335 + 19662933-19663334,19663358-19664023 29 5.1
10_08_0146 - 15184123-15184968,15185049-15185519,15185606-15185869 28 6.8
06_03_0854 + 25400855-25403741,25406174-25407708 28 6.8
09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817 28 9.0
07_01_0262 + 1957973-1958220,1958272-1958935 28 9.0
05_07_0128 + 27879969-27880143,27880232-27881323,27883562-278836... 28 9.0
04_04_0662 - 27051508-27051828,27051878-27053438,27054333-27054733 28 9.0
04_04_0433 + 25163111-25163471,25163943-25164154,25164420-251647... 28 9.0
>03_05_0756 +
27469002-27469107,27469200-27469369,27470210-27471001,
27471182-27471398,27471972-27472150,27472592-27472833,
27473662-27474052
Length = 698
Score = 33.5 bits (73), Expect = 0.18
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +1
Query: 253 SFLLKRIVAALPPDVTMPTASTGVAACHIGGTTLHAFAGIGDGSGS 390
S LL + AA PP + +P + A + GTTL G G GS S
Sbjct: 13 SLLLLLLAAAAPPALALPLCTDSRAPVPLNGTTLGFCGGGGSGSSS 58
>06_03_1363 - 29576265-29577575
Length = 436
Score = 31.9 bits (69), Expect = 0.55
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = -1
Query: 389 DPLPSPMPAKA*RVVPPM*QAATPVDAVGIVTSGGKAATI 270
DP SP PA A +PP+ DA V SGGK +
Sbjct: 246 DPAASPPPAAAWEPIPPLRDGRFSRDAAEAVCSGGKVCMV 285
>07_01_0586 -
4354613-4354996,4355537-4355662,4355752-4355827,
4356444-4356651,4356813-4356906,4357430-4357504,
4358200-4358622
Length = 461
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = -1
Query: 410 LSHKFSIDPLPSPMPAKA*RVVPPM*QAATPVDAVGIVTSGG 285
+ H F++D +P P+ A V P AA VD VG V+ GG
Sbjct: 1 MEHVFAVDEIPDPLWAPPPPVQP---AAAAGVDDVGAVSGGG 39
>01_01_0537 + 3931429-3932316,3937245-3937553,3937646-3937912
Length = 487
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = +1
Query: 250 KSFLLKRIVAALPPDVTMPTASTGVA----ACHIGGTTLHAFAGIGDGSGSIENLCERAT 417
K LL+ +VAALPPD P G A C L A + +G + ++ L RA
Sbjct: 125 KRLLLESLVAALPPDPPAPAGGGGAADDGITCDFLLKLLRAGSMVGADAALLQELESRAA 184
Query: 418 K 420
+
Sbjct: 185 R 185
>09_04_0736 -
19815427-19815642,19815782-19816903,19817006-19817707,
19817808-19817855,19817959-19818201,19819035-19819391
Length = 895
Score = 29.5 bits (63), Expect = 2.9
Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +1
Query: 142 ARSKSSNSPADETHSTQSAHRKPVHDRVFTGSAGTGKS--FLLKRIVAALPPDVTMPTAS 315
ARS+ S+SPA H T HR + + GS G S L I PDV +A
Sbjct: 414 ARSERSSSPAIRIHGT--VHRTSYLEHFWRGSIAKGGSPPLDLTHIPLFCRPDVVNCSAR 471
Query: 316 TGV 324
TG+
Sbjct: 472 TGL 474
>09_04_0615 +
18972227-18972250,18972293-18972397,18973492-18973584,
18973887-18973993,18974107-18974157,18974675-18974928,
18975176-18975221,18975896-18976127
Length = 303
Score = 29.1 bits (62), Expect = 3.9
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Frame = +3
Query: 12 ERVAPGAGFGPRRSISPAVTQRERRSDASVTIAQRPVIRHLRTRP-VEVQQLPRR--RDP 182
E A AG G ++ + A + E R +AS+ + R R RP V R RD
Sbjct: 139 EHDATRAGEGEGKAAAAAAEEEEARGEASMVVRIRLARFGCRNRPFYRVMAADSRSPRDG 198
Query: 183 QHAECAPQARPRPG 224
+H E P PG
Sbjct: 199 KHLEVLGYYNPLPG 212
>05_04_0319 +
20171486-20171800,20171882-20171956,20172160-20172195,
20172302-20172413,20173082-20173152,20173287-20173417,
20173718-20173783,20174003-20174103,20174311-20174370,
20174463-20174496,20174852-20174950,20175019-20175078,
20175700-20175874,20175900-20175950,20176603-20176632
Length = 471
Score = 29.1 bits (62), Expect = 3.9
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2
Query: 181 GSRLRGSCWTSTGRVRRW 128
G + SCWTST RV+ W
Sbjct: 317 GDEVNTSCWTSTPRVKAW 334
>03_05_0953 + 29111030-29111105,29112250-29113520
Length = 448
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 223 VFTGSAGTGKSFLLKRIVAALPPDVTMPTASTGVAACHIGGTTLHAFAGIGDGS 384
V + AGTG S LL +P + P A+ A H+ T+ A + + G+
Sbjct: 69 VISAFAGTGISLLLGAANGDIPNFASSPAAAAAWVAAHLPSTSSPAISAVSLGN 122
>02_04_0635 - 24646603-24647337
Length = 244
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +1
Query: 331 CHIGGTTLHA-FAGIGDGSGSIENLCERATK 420
C+ GTT+ + G+ SG +E LC RATK
Sbjct: 113 CYEPGTTVEVNYHGVLLASGPVEQLCARATK 143
>01_01_0862 +
6714041-6714358,6714462-6714603,6715511-6715735,
6715769-6716763,6717327-6717381,6717469-6717621,
6718130-6718299,6718388-6718870
Length = 846
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 364 AGIGDGSGSIENLCERATKIPLVAQKWRKCKH 459
AG+ G G+ +C A + P+V+Q+WR+ +H
Sbjct: 720 AGVEGGGGANGEVCA-AAEAPVVSQEWRQERH 750
>09_04_0203 -
15556064-15556561,15557537-15557581,15557852-15558258,
15558538-15558841,15559421-15560757,15561492-15561750
Length = 949
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = -1
Query: 539 FFLICLATASNFSKNIPSTIDISSIIRCLHFLHFCATNGILVALSHKFSI 390
F + L A N +KN T+D+ I+ + A +L+A+ +S+
Sbjct: 12 FLFLSLTVAQNITKNGAGTLDVGVILHLKSLVGKIARTSVLMAVEDFYSV 61
>06_03_0335 + 19662933-19663334,19663358-19664023
Length = 355
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +3
Query: 3 GGGERVA-PGAGFGPRRSISPAVTQRERRSDASVTIAQRPVIRHLRTRPVEVQQLPR 170
GGG R G G G + V + +D V + R + R L RP+ V +PR
Sbjct: 101 GGGRRGGGSGKGKGATTVVVECVVCLQELADGDVALLPRRLHRPLAARPLHVPGVPR 157
>10_08_0146 - 15184123-15184968,15185049-15185519,15185606-15185869
Length = 526
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 6/47 (12%)
Frame = -2
Query: 124 ITGLWAIVTEASL---LLSRCVTAGEIERR---GPKPAPGATRSPPP 2
++GLW + + AS L + V G ++ R P P+P AT PPP
Sbjct: 326 LSGLWQVRSPASRFSDLGALAVPLGSLKTRRAIAPPPSPPATTHPPP 372
>06_03_0854 + 25400855-25403741,25406174-25407708
Length = 1473
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 283 LPPDVTMPTASTGVAACHIGGTTLHAFAGIGDGSG 387
+P V PT+S A +GG A AG+G G G
Sbjct: 316 VPVQVPAPTSSGSDEAAFVGGRGRGAGAGVGGGRG 350
>09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817
Length = 883
Score = 27.9 bits (59), Expect = 9.0
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = +3
Query: 93 ASVTIAQRPVIRHLRTRPVEVQQLPRRRDPQHAECAPQARPR 218
+SVT+A R + HLR V V PR R P A P A PR
Sbjct: 599 SSVTLALRALTPHLRALRVSV---PRPRAPS-ASAPPAAAPR 636
>07_01_0262 + 1957973-1958220,1958272-1958935
Length = 303
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/46 (39%), Positives = 20/46 (43%)
Frame = -2
Query: 139 VRRWRITGLWAIVTEASLLLSRCVTAGEIERRGPKPAPGATRSPPP 2
VRRWR T W +S S V G RR P PA A + P
Sbjct: 76 VRRWRATRSWLRQASSS---SAPVAVGCPTRRRPSPAAAAEKCSLP 118
>05_07_0128 +
27879969-27880143,27880232-27881323,27883562-27883698,
27884179-27884409,27884707-27884730
Length = 552
Score = 27.9 bits (59), Expect = 9.0
Identities = 19/61 (31%), Positives = 24/61 (39%)
Frame = +1
Query: 133 YGRARSKSSNSPADETHSTQSAHRKPVHDRVFTGSAGTGKSFLLKRIVAALPPDVTMPTA 312
YG + ++N PA H PVHD V A T L AA P + T+
Sbjct: 356 YGIGVTAAAN-PAPHHHHHHHHLASPVHDAVSAADASTAAMILPFTTTAAATPSNVVATS 414
Query: 313 S 315
S
Sbjct: 415 S 415
>04_04_0662 - 27051508-27051828,27051878-27053438,27054333-27054733
Length = 760
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 96 SVTIAQRPVIRHLRTRPVEVQQLPRRRDPQHAECAPQARPRP 221
+ T+ Q P L+T P V+Q R+ PQ PQA P P
Sbjct: 390 AATVIQMPTPVQLQTPP-PVKQPARQHQPQPTPPPPQAAPIP 430
>04_04_0433 +
25163111-25163471,25163943-25164154,25164420-25164701,
25164794-25164916,25165511-25165664,25165754-25165965,
25166143-25166212,25166294-25166424
Length = 514
Score = 27.9 bits (59), Expect = 9.0
Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Frame = -2
Query: 193 SACCGS-RLRGSCWTSTGRVRRWRITGLW---AIVTEASLLLSRCVTAGEIERRGPKPAP 26
+AC S R R S W GR+ R R+ G A A ++ RC + G G PA
Sbjct: 24 TACTSSSRRRASPWGGAGRLIRLRLRGHCPSPASARAARVVSPRCSSYGAAADAGESPAE 83
Query: 25 GATR 14
R
Sbjct: 84 ALRR 87
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,452,225
Number of Sequences: 37544
Number of extensions: 554903
Number of successful extensions: 2160
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2159
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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