Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0075
(740 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024751-9|AAK21508.2| 677|Caenorhabditis elegans Pif1p dna hel... 188 4e-48
AB015041-1|BAA28677.1| 677|Caenorhabditis elegans PIF1 protein. 188 4e-48
AL132872-1|CAB60760.1| 180|Caenorhabditis elegans Hypothetical ... 58 7e-09
Z70204-2|CAA94112.1| 169|Caenorhabditis elegans Hypothetical pr... 56 3e-08
AF040649-6|AAB95006.1| 1360|Caenorhabditis elegans Hypothetical ... 49 3e-06
AC006770-1|AAF60594.1| 1365|Caenorhabditis elegans Hypothetical ... 49 3e-06
AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical ... 49 3e-06
AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical ... 47 1e-05
AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical ... 47 1e-05
Z81499-1|CAB04087.1| 471|Caenorhabditis elegans Hypothetical pr... 36 0.023
AC024838-7|AAF60820.1| 381|Caenorhabditis elegans Hypothetical ... 32 0.37
AC024838-3|AAF60821.1| 381|Caenorhabditis elegans Hypothetical ... 32 0.37
U29380-1|AAA68740.1| 346|Caenorhabditis elegans Hypothetical pr... 32 0.49
U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr... 31 0.86
AF026212-1|AAF99971.1| 807|Caenorhabditis elegans Hypothetical ... 31 0.86
U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn (wern... 30 1.5
AL032647-5|CAA21693.1| 370|Caenorhabditis elegans Hypothetical ... 30 1.5
AF099913-7|AAC68747.1| 226|Caenorhabditis elegans Hypothetical ... 30 1.5
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p... 29 2.6
U46669-3|AAA85744.2| 737|Caenorhabditis elegans Regulator of g ... 28 6.0
AL110501-9|CAB54507.2| 802|Caenorhabditis elegans Hypothetical ... 28 6.0
AL033514-40|CAD36501.1| 802|Caenorhabditis elegans Hypothetical... 28 6.0
AJ319870-1|CAC67459.1| 802|Caenorhabditis elegans ZYG-8 protein... 28 6.0
Z81479-11|CAB03937.2| 1441|Caenorhabditis elegans Hypothetical p... 28 8.0
Z73423-8|CAO82012.1| 1441|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z68319-5|CAA92703.1| 261|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z30215-7|CAA82940.1| 322|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z29560-13|CAA82665.1| 322|Caenorhabditis elegans Hypothetical p... 28 8.0
U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crum... 28 8.0
>AC024751-9|AAK21508.2| 677|Caenorhabditis elegans Pif1p dna
helicase (yeast) homologprotein 1 protein.
Length = 677
Score = 188 bits (458), Expect = 4e-48
Identities = 91/171 (53%), Positives = 115/171 (67%)
Frame = +1
Query: 226 FTGSAGTGKSFLLKRIVAALPPDVTMPTASTGVAACHIGGTTLHAFAGIGDGSGSIENLC 405
FTGSAGTGKS +L+RI+ LP T TA+TGVAA IGG TLHAF G + + E
Sbjct: 266 FTGSAGTGKSVILRRIIEMLPAGNTYITAATGVAASQIGGITLHAFCGFRYENSTPEQCL 325
Query: 406 ERATKIPLVAQKWRKCKHLIIDEISMVDGIFFEKLEAVARHIRKNDKPFGGIQLILCGDF 585
++ + + ++W++C HLIIDEISM+D FFE LE VAR +R NDKPFGGIQLI+ GDF
Sbjct: 326 KQVLRQNHMVRQWKQCSHLIIDEISMIDRDFFEALEYVARTVRNNDKPFGGIQLIITGDF 385
Query: 586 LQLPPVVDKNKQKRFCFQSHCWDKCIELCFELKQVHRQTDQEFISILNSIR 738
QLPPV + FCF+S W +CI+ LK V RQ D F+ ILN++R
Sbjct: 386 FQLPPV--SKDEPVFCFESEAWSRCIQKTIVLKNVKRQNDNVFVKILNNVR 434
>AB015041-1|BAA28677.1| 677|Caenorhabditis elegans PIF1 protein.
Length = 677
Score = 188 bits (458), Expect = 4e-48
Identities = 91/171 (53%), Positives = 115/171 (67%)
Frame = +1
Query: 226 FTGSAGTGKSFLLKRIVAALPPDVTMPTASTGVAACHIGGTTLHAFAGIGDGSGSIENLC 405
FTGSAGTGKS +L+RI+ LP T TA+TGVAA IGG TLHAF G + + E
Sbjct: 266 FTGSAGTGKSVILRRIIEMLPAGNTYITAATGVAASQIGGITLHAFCGFRYENSTPEQCL 325
Query: 406 ERATKIPLVAQKWRKCKHLIIDEISMVDGIFFEKLEAVARHIRKNDKPFGGIQLILCGDF 585
++ + + ++W++C HLIIDEISM+D FFE LE VAR +R NDKPFGGIQLI+ GDF
Sbjct: 326 KQVLRQNHMVRQWKQCSHLIIDEISMIDRDFFEALEYVARTVRNNDKPFGGIQLIITGDF 385
Query: 586 LQLPPVVDKNKQKRFCFQSHCWDKCIELCFELKQVHRQTDQEFISILNSIR 738
QLPPV + FCF+S W +CI+ LK V RQ D F+ ILN++R
Sbjct: 386 FQLPPV--SKDEPVFCFESEAWSRCIQKTIVLKNVKRQNDNVFVKILNNVR 434
>AL132872-1|CAB60760.1| 180|Caenorhabditis elegans Hypothetical
protein Y116F11A.1 protein.
Length = 180
Score = 58.0 bits (134), Expect = 7e-09
Identities = 45/129 (34%), Positives = 67/129 (51%), Gaps = 5/129 (3%)
Frame = +1
Query: 223 VFTGSAGTGKSFLLKRIVAALPPDV----TMPTASTGVAACHIGGTTLHAFAGIGDGSGS 390
+ G+AGTGK+FL+K I ++ V + T STG AA IGG TLH G+ +
Sbjct: 26 MINGAAGTGKTFLIKLIENSMNRSVRKRVVLMTGSTGKAAKAIGGRTLHCTIGLPNEKP- 84
Query: 391 IENLCERATKIPLVAQKWRKCKHLIIDEISMVDGIFFEKLEAVARHI-RKNDKPFGGIQL 567
E+L ER + R +IIDEI+++ + + V + ++ D FGG+ +
Sbjct: 85 -EDL-ERLKYQAFICVTTRL---IIIDEITLLASWHLDATDMVLKRTPKRTDALFGGLSI 139
Query: 568 ILCGDFLQL 594
IL GD QL
Sbjct: 140 ILVGDLRQL 148
>Z70204-2|CAA94112.1| 169|Caenorhabditis elegans Hypothetical
protein C11G6.2 protein.
Length = 169
Score = 56.0 bits (129), Expect = 3e-08
Identities = 43/130 (33%), Positives = 67/130 (51%), Gaps = 6/130 (4%)
Frame = +1
Query: 223 VFTGSAGTGKSFLLKRIVAALPPD----VTMPTASTGVAACHIGGTTLHAFAGI-GDGSG 387
+ G+A TGK+FL+K I ++ V + T STG AA IGG TLH G+ +
Sbjct: 26 MINGAARTGKTFLIKLIENSMNRSAGKRVVLMTGSTGKAAKAIGGRTLHCTIGLPNEKPE 85
Query: 388 SIENLCERATKIPLVAQKWRKCKHLIIDEISMVDGIFFEKLEAVARHIRK-NDKPFGGIQ 564
+E+L +A + + +IIDEI+++ + + V + +K D FGG+
Sbjct: 86 DLESLKSQAF-------IYATTRLIIIDEITLLASWHLDATDMVLKRTQKRTDALFGGLS 138
Query: 565 LILCGDFLQL 594
+IL GD QL
Sbjct: 139 IILVGDLRQL 148
>AF040649-6|AAB95006.1| 1360|Caenorhabditis elegans Hypothetical
protein F33H12.6 protein.
Length = 1360
Score = 49.2 bits (112), Expect = 3e-06
Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 5/135 (3%)
Frame = +1
Query: 232 GSAGTGKSFL---LKRIVAALPPDVTMPTASTGVAA--CHIGGTTLHAFAGIGDGSGSIE 396
G G+GK++L L I V TA TG+AA +G T+ F + +
Sbjct: 945 GPGGSGKTYLYITLYNICVGRGLKVAC-TAWTGIAANLLPLGRTSASLFK-LDIRNQCKS 1002
Query: 397 NLCERATKIPLVAQKWRKCKHLIIDEISMVDGIFFEKLEAVARHIRKNDKPFGGIQLILC 576
+L +R K AQ+ + I DE SMV + ++ + R + K D+PFGG LIL
Sbjct: 1003 SLHQRQLK---EAQELAENDVFIWDEASMVPKTALDTVDVLLRDLTKIDQPFGGKILILG 1059
Query: 577 GDFLQLPPVVDKNKQ 621
GDF Q+ PVV+++ +
Sbjct: 1060 GDFRQILPVVERSSR 1074
>AC006770-1|AAF60594.1| 1365|Caenorhabditis elegans Hypothetical
protein Y46B2A.2 protein.
Length = 1365
Score = 49.2 bits (112), Expect = 3e-06
Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 5/135 (3%)
Frame = +1
Query: 232 GSAGTGKSFL---LKRIVAALPPDVTMPTASTGVAA--CHIGGTTLHAFAGIGDGSGSIE 396
G G+GK++L L I V TA TG+AA +G T+ F + +
Sbjct: 950 GPGGSGKTYLYITLYNICVGRGLKVAC-TAWTGIAANLLPLGRTSASLFK-LDIRNQCKS 1007
Query: 397 NLCERATKIPLVAQKWRKCKHLIIDEISMVDGIFFEKLEAVARHIRKNDKPFGGIQLILC 576
+L +R K AQ+ + I DE SMV + ++ + R + K D+PFGG LIL
Sbjct: 1008 SLHQRQLK---EAQELAENDVFIWDEASMVPKTALDTVDVLLRDLTKIDQPFGGKILILG 1064
Query: 577 GDFLQLPPVVDKNKQ 621
GDF Q+ PVV+++ +
Sbjct: 1065 GDFRQILPVVERSSR 1079
>AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical
protein F59H6.5 protein.
Length = 1486
Score = 49.2 bits (112), Expect = 3e-06
Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 5/135 (3%)
Frame = +1
Query: 232 GSAGTGKSFL---LKRIVAALPPDVTMPTASTGVAA--CHIGGTTLHAFAGIGDGSGSIE 396
G G+GK++L L I V TA TG+AA +G T+ F + +
Sbjct: 1071 GPGGSGKTYLYITLYNICVGRGLKVAC-TAWTGIAANLLPLGRTSASLFK-LDIRNQCKS 1128
Query: 397 NLCERATKIPLVAQKWRKCKHLIIDEISMVDGIFFEKLEAVARHIRKNDKPFGGIQLILC 576
+L +R K AQ+ + I DE SMV + ++ + R + K D+PFGG LIL
Sbjct: 1129 SLHQRQLK---EAQELAENDVFIWDEASMVPKTALDTVDVLLRDLTKIDQPFGGKILILG 1185
Query: 577 GDFLQLPPVVDKNKQ 621
GDF Q+ PVV+++ +
Sbjct: 1186 GDFRQILPVVERSSR 1200
>AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical
protein ZK250.9 protein.
Length = 1466
Score = 47.2 bits (107), Expect = 1e-05
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Frame = +1
Query: 307 TASTGVAA--CHIGGTTLHAFAGIGDGSGSIENLCERATKIPLVAQKWRKCKHLIIDEIS 480
TA TG+AA +G T+ F + + +L +R K AQ+ + I DE S
Sbjct: 1078 TAWTGIAANLLPLGRTSASLFK-LDIRNQCKSSLHQRQLK---EAQELAENDVFIWDEAS 1133
Query: 481 MVDGIFFEKLEAVARHIRKNDKPFGGIQLILCGDFLQLPPVVDKNKQ 621
MV + ++ + R + K D+PFGG LIL GDF Q+ PVV+++ +
Sbjct: 1134 MVPKTALDTVDVLLRDLTKIDQPFGGKILILGGDFRQILPVVERSSR 1180
>AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical
protein Y16E11A.2 protein.
Length = 1466
Score = 47.2 bits (107), Expect = 1e-05
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Frame = +1
Query: 307 TASTGVAA--CHIGGTTLHAFAGIGDGSGSIENLCERATKIPLVAQKWRKCKHLIIDEIS 480
TA TG+AA +G T+ F + + +L +R K AQ+ + I DE S
Sbjct: 1078 TAWTGIAANLLPLGRTSASLFK-LDIRNQCKSSLHQRQLK---EAQELAENDVFIWDEAS 1133
Query: 481 MVDGIFFEKLEAVARHIRKNDKPFGGIQLILCGDFLQLPPVVDKNKQ 621
MV + ++ + R + K D+PFGG LIL GDF Q+ PVV+++ +
Sbjct: 1134 MVPKTALDTVDVLLRDLTKIDQPFGGKILILGGDFRQILPVVERSSR 1180
>Z81499-1|CAB04087.1| 471|Caenorhabditis elegans Hypothetical
protein F11C3.1 protein.
Length = 471
Score = 36.3 bits (80), Expect = 0.023
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = +1
Query: 454 KHLIIDEISMVDGIFFEKLEAVARHIRKNDKPFGGIQLILCGDFLQLPP 600
+H I +I +F E+++ + R ++ NDKPFGG +++ DF QL P
Sbjct: 146 EHKSILKILSNHDVFLEEIDKLKRAMQ-NDKPFGGKAIVMAADFGQLLP 193
>AC024838-7|AAF60820.1| 381|Caenorhabditis elegans Hypothetical
protein Y59E9AL.2 protein.
Length = 381
Score = 32.3 bits (70), Expect = 0.37
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 65 RNTTGEKERCLCDYCPEARDPPPTDAPG 148
RN G C C+ CP+ PPP PG
Sbjct: 167 RNCIGGPPHCECENCPKPPPPPPIPPPG 194
>AC024838-3|AAF60821.1| 381|Caenorhabditis elegans Hypothetical
protein Y59E9AL.3 protein.
Length = 381
Score = 32.3 bits (70), Expect = 0.37
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 65 RNTTGEKERCLCDYCPEARDPPPTDAPG 148
RN G C C+ CP+ PPP PG
Sbjct: 167 RNCIGGPPHCECENCPKPPPPPPIPPPG 194
>U29380-1|AAA68740.1| 346|Caenorhabditis elegans Hypothetical
protein ZK546.7 protein.
Length = 346
Score = 31.9 bits (69), Expect = 0.49
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 65 RNTTGEKERCLCDYCPEARDPPPTDAPG 148
RN G C C+ CP+ PPP PG
Sbjct: 132 RNCVGGPPYCECENCPKLPPPPPIPPPG 159
>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical
protein K10D2.3 protein.
Length = 1425
Score = 31.1 bits (67), Expect = 0.86
Identities = 18/37 (48%), Positives = 20/37 (54%)
Frame = +1
Query: 112 RGP*SATYGRARSKSSNSPADETHSTQSAHRKPVHDR 222
RG S GR RS SNSPAD S+Q R P +R
Sbjct: 20 RGGNSQNSGRKRS--SNSPADSASSSQKTSRNPSQNR 54
>AF026212-1|AAF99971.1| 807|Caenorhabditis elegans Hypothetical
protein F52G3.3 protein.
Length = 807
Score = 31.1 bits (67), Expect = 0.86
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +1
Query: 529 IRKNDKPFGGIQLILCGDFLQLPPVV 606
+ ++D PFGG+ +I+ GD+ Q+ P+V
Sbjct: 440 MHQSDLPFGGVLMIMGGDWRQILPIV 465
>U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn
(werner's syndrome) relatedprotein 1 protein.
Length = 1056
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = -2
Query: 166 GSCWTSTGRVRRWRITGLWAIVTEASLLLSRCVTAGEIERRGPKPAPGATRS 11
GSC T + RW +TG + +LL G+ E+ P PGA+RS
Sbjct: 717 GSCITLSELGERWLLTGKEMKIDATPILLQ-----GKKEKAAPSTVPGASRS 763
>AL032647-5|CAA21693.1| 370|Caenorhabditis elegans Hypothetical
protein Y57A10B.6 protein.
Length = 370
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/34 (47%), Positives = 25/34 (73%), Gaps = 2/34 (5%)
Frame = +1
Query: 451 CKHLI--IDEISMVDGIFFEKLEAVARHIRKNDK 546
CKHLI I+E+ V G+ +E LEA+ R++R+N +
Sbjct: 256 CKHLIDFIEEMEEV-GMQWENLEALERYLRENSE 288
>AF099913-7|AAC68747.1| 226|Caenorhabditis elegans Hypothetical
protein C29F9.5 protein.
Length = 226
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Frame = +3
Query: 171 RRDPQHAECAPQARPRPGFHWLCRNRKKFLIKKDCGSFTS*-----CNDAHCIHWGRSLS 335
RRD + E A + P P H +C+ + ++K+ TS CN HC LS
Sbjct: 20 RRDIKIREAAEKNEPAP--HAMCKIQDCVIMKEVLKHMTSCKEGPKCNSVHCASSRTILS 77
Query: 336 HW 341
HW
Sbjct: 78 HW 79
>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +3
Query: 249 KKFLIKKDCGSFTS*-CNDAHCIHWGRSLSHWWNHSSCFC 365
K F + C + TS CND C H G +S +H C C
Sbjct: 3896 KLFGAQPGCSALTSSPCNDLPCQHAGTCISQGKSHFKCEC 3935
>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +3
Query: 249 KKFLIKKDCGSFTS*-CNDAHCIHWGRSLSHWWNHSSCFC 365
K F + C + TS CND C H G +S +H C C
Sbjct: 3896 KLFGAQPGCSALTSSPCNDLPCQHAGTCISQGKSHFKCEC 3935
>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +3
Query: 249 KKFLIKKDCGSFTS*-CNDAHCIHWGRSLSHWWNHSSCFC 365
K F + C + TS CND C H G +S +H C C
Sbjct: 3896 KLFGAQPGCSALTSSPCNDLPCQHAGTCISQGKSHFKCEC 3935
>U46669-3|AAA85744.2| 737|Caenorhabditis elegans Regulator of g
protein signalingprotein 6 protein.
Length = 737
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -1
Query: 512 SNFSKNIPSTIDISSIIRCLHFLHFCATNGILVALSHKFSIDP 384
+NFS P++ + C+ H +T +L L HK+++DP
Sbjct: 332 ANFSFKNPASTPTKLV--CIRARHSLSTGAVLRPLLHKYTLDP 372
>AL110501-9|CAB54507.2| 802|Caenorhabditis elegans Hypothetical
protein Y79H2A.11 protein.
Length = 802
Score = 28.3 bits (60), Expect = 6.0
Identities = 21/91 (23%), Positives = 41/91 (45%)
Frame = +1
Query: 454 KHLIIDEISMVDGIFFEKLEAVARHIRKNDKPFGGIQLILCGDFLQLPPVVDKNKQKRFC 633
+HLI E++++ I + + H +D + ++LI GD + +V + ++
Sbjct: 523 EHLIEMELAILQKIDHTFIVQLYDHWFVDDSYYLSLELIEMGDLFEHLRIVRRVPERDAV 582
Query: 634 FQSHCWDKCIELCFELKQVHRQTDQEFISIL 726
C + +E EL VHR E + I+
Sbjct: 583 RMMTCLGQALEYIHELGIVHRDVKLENLLIV 613
>AL033514-40|CAD36501.1| 802|Caenorhabditis elegans Hypothetical
protein Y79H2A.11 protein.
Length = 802
Score = 28.3 bits (60), Expect = 6.0
Identities = 21/91 (23%), Positives = 41/91 (45%)
Frame = +1
Query: 454 KHLIIDEISMVDGIFFEKLEAVARHIRKNDKPFGGIQLILCGDFLQLPPVVDKNKQKRFC 633
+HLI E++++ I + + H +D + ++LI GD + +V + ++
Sbjct: 523 EHLIEMELAILQKIDHTFIVQLYDHWFVDDSYYLSLELIEMGDLFEHLRIVRRVPERDAV 582
Query: 634 FQSHCWDKCIELCFELKQVHRQTDQEFISIL 726
C + +E EL VHR E + I+
Sbjct: 583 RMMTCLGQALEYIHELGIVHRDVKLENLLIV 613
>AJ319870-1|CAC67459.1| 802|Caenorhabditis elegans ZYG-8 protein
protein.
Length = 802
Score = 28.3 bits (60), Expect = 6.0
Identities = 21/91 (23%), Positives = 41/91 (45%)
Frame = +1
Query: 454 KHLIIDEISMVDGIFFEKLEAVARHIRKNDKPFGGIQLILCGDFLQLPPVVDKNKQKRFC 633
+HLI E++++ I + + H +D + ++LI GD + +V + ++
Sbjct: 523 EHLIEMELAILQKIDHTFIVQLYDHWFVDDSYYLSLELIEMGDLFEHLRIVRRVPERDAV 582
Query: 634 FQSHCWDKCIELCFELKQVHRQTDQEFISIL 726
C + +E EL VHR E + I+
Sbjct: 583 RMMTCLGQALEYIHELGIVHRDVKLENLLIV 613
>Z81479-11|CAB03937.2| 1441|Caenorhabditis elegans Hypothetical
protein C34F6.10 protein.
Length = 1441
Score = 27.9 bits (59), Expect = 8.0
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = -1
Query: 506 FSKNIPSTIDISSIIRCLHFLHFCATNGILVALSHKFSIDPLPSPM 369
F NIP IS +R H T+G LSH + LPSP+
Sbjct: 944 FFDNIPGETTISVQVRAAVSFHDALTHGDWSVLSHFTTPRGLPSPV 989
>Z73423-8|CAO82012.1| 1441|Caenorhabditis elegans Hypothetical protein
C34F6.10 protein.
Length = 1441
Score = 27.9 bits (59), Expect = 8.0
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = -1
Query: 506 FSKNIPSTIDISSIIRCLHFLHFCATNGILVALSHKFSIDPLPSPM 369
F NIP IS +R H T+G LSH + LPSP+
Sbjct: 944 FFDNIPGETTISVQVRAAVSFHDALTHGDWSVLSHFTTPRGLPSPV 989
>Z68319-5|CAA92703.1| 261|Caenorhabditis elegans Hypothetical
protein T23G7.5a protein.
Length = 261
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 133 YGRARSKSSNSPADETHSTQSAHR 204
YG++ KSS + AD T S++ HR
Sbjct: 234 YGKSSGKSSGNSADSTISSEQLHR 257
>Z30215-7|CAA82940.1| 322|Caenorhabditis elegans Hypothetical
protein K03H1.10 protein.
Length = 322
Score = 27.9 bits (59), Expect = 8.0
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Frame = +3
Query: 174 RDPQHAECAPQARPRPGFHWLCR-----NRKKFLIKKDCGSFTS*CNDAHCIHWGRSLSH 338
RD ++ E A + +P P H CR K+ LI + C+ AHC + ++H
Sbjct: 30 RDKENNEFAARNQPLP--HTTCRLPHCPTMKEVLIHMTNCNVGRLCHFAHCASSRQIIAH 87
Query: 339 WWNHSSCFC 365
W N S C
Sbjct: 88 WKNCSREDC 96
>Z29560-13|CAA82665.1| 322|Caenorhabditis elegans Hypothetical
protein K03H1.10 protein.
Length = 322
Score = 27.9 bits (59), Expect = 8.0
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Frame = +3
Query: 174 RDPQHAECAPQARPRPGFHWLCR-----NRKKFLIKKDCGSFTS*CNDAHCIHWGRSLSH 338
RD ++ E A + +P P H CR K+ LI + C+ AHC + ++H
Sbjct: 30 RDKENNEFAARNQPLP--HTTCRLPHCPTMKEVLIHMTNCNVGRLCHFAHCASSRQIIAH 87
Query: 339 WWNHSSCFC 365
W N S C
Sbjct: 88 WKNCSREDC 96
>U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crumbs
homolog protein 1 protein.
Length = 1722
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 243 NRKKFLIKKDCGSFTS*CNDAHCIHWGRSLSHWWNHSSCFC 365
N++ I+K C + + C A+C + G + H W SSC C
Sbjct: 702 NKRAIDIRKGC-TRSEQCTRAYCQNEGICIDH-WESSSCKC 740
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,590,418
Number of Sequences: 27780
Number of extensions: 445317
Number of successful extensions: 1649
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1638
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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