Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0069
(644 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_1124 + 30559633-30559674,30559781-30559890,30559973-305600... 75 5e-14
12_02_1181 - 26732439-26732528,26732883-26732963,26733104-267331... 67 1e-11
06_03_0487 - 21352955-21353080,21353164-21353357,21353815-213539... 66 2e-11
06_01_0358 + 2573241-2573324,2573509-2573636,2573769-2573971,257... 66 3e-11
06_03_0491 - 21383036-21383161,21383246-21383439,21383627-213837... 65 5e-11
04_01_0339 - 4429742-4429840,4429932-4430012,4430232-4430291,443... 61 6e-10
03_02_0162 + 6053144-6053365,6053474-6053548,6054477-6054623,605... 60 1e-09
06_03_0486 - 21344680-21344805,21344922-21345115,21350027-213501... 59 3e-09
02_02_0105 + 6810839-6810913,6811005-6811132,6811562-6811764,681... 58 6e-09
01_06_1119 - 34640611-34640721,34640995-34641075,34641437-346414... 56 2e-08
01_07_0387 - 43224718-43224810,43224990-43225070,43225676-432257... 56 2e-08
11_01_0528 - 4148737-4149483,4149618-4150147,4150238-4150736,415... 37 0.016
11_01_0531 - 4192567-4193253,4193900-4194427 33 0.19
05_01_0258 + 1984666-1984878,1985019-1985852 32 0.34
04_03_0354 + 14830325-14830826,14831491-14832416 30 1.8
01_02_0063 - 10746968-10747783,10747995-10748222 29 3.2
06_03_0834 - 25206825-25207075,25207326-25207424,25207531-252082... 28 5.5
05_04_0189 - 18911654-18913207,18913310-18913528,18914034-189143... 28 5.5
04_04_1672 - 35242468-35243235,35243481-35243645 28 5.5
07_01_0042 - 334417-334431,334563-334688,334852-335136,335220-33... 28 7.3
01_02_0058 - 10699702-10700517,10700997-10701206 28 7.3
08_02_0607 + 19285580-19286138,19286734-19287668 27 9.7
>03_05_1124 +
30559633-30559674,30559781-30559890,30559973-30560030,
30560455-30560718,30560803-30560940,30561264-30561315,
30561525-30561604,30561929-30561988,30562084-30562164,
30562299-30562376,30563548-30563676,30563896-30564039,
30564145-30564290,30564402-30564558,30564657-30564715,
30564800-30564959,30565054-30565203,30565309-30565445,
30565531-30565677,30565995-30566052,30566417-30566518,
30566590-30566627,30566846-30566972,30567053-30567223,
30567313-30567444,30567575-30567681,30567815-30567875,
30567970-30568147,30568245-30568450,30568781-30568879,
30569021-30569236,30569333-30569472,30569559-30569660,
30569747-30569861,30570129-30570194,30570323-30570480,
30570594-30570690,30570931-30571137,30571435-30571505,
30571648-30571747,30571836-30571892,30571969-30572025,
30572108-30572188,30572319-30572401,30572504-30572651
Length = 1722
Score = 74.9 bits (176), Expect = 5e-14
Identities = 35/74 (47%), Positives = 51/74 (68%)
Frame = +2
Query: 422 DRNQKVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDA 601
+ Q + SD+ +IGNTPLV L+K+ +G + ++ AK E + P SVKDRI Y M DA
Sbjct: 3 ESGQSIASDVTALIGNTPLVYLNKVV--DGCEAQIAAKLEIMEPCSSVKDRIGYSMITDA 60
Query: 602 EQKGILKPGKSVIV 643
E+KG++ PGKSV++
Sbjct: 61 EEKGLITPGKSVLI 74
>12_02_1181 -
26732439-26732528,26732883-26732963,26733104-26733163,
26733372-26733451,26733815-26733866,26733987-26734124,
26734203-26734466,26735895-26735952,26736153-26736262,
26736385-26736432,26736812-26736823
Length = 330
Score = 67.3 bits (157), Expect = 1e-11
Identities = 32/71 (45%), Positives = 47/71 (66%)
Frame = +2
Query: 431 QKVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAEQK 610
+ + D+ +IGNTPLV L+++ +G + AK E + P SVKDRI Y M DAE+K
Sbjct: 12 ETIAKDVTELIGNTPLVYLNRVT--DGCVGRVAAKLESMEPCSSVKDRIGYSMITDAEEK 69
Query: 611 GILKPGKSVIV 643
G++ PGKSV++
Sbjct: 70 GLITPGKSVLI 80
>06_03_0487 -
21352955-21353080,21353164-21353357,21353815-21353973,
21354117-21354242,21354502-21354704,21354892-21355019,
21355323-21355565,21356734-21356928
Length = 457
Score = 66.1 bits (154), Expect = 2e-11
Identities = 32/84 (38%), Positives = 53/84 (63%)
Frame = +2
Query: 392 KDMPHIVRALDRNQKVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKD 571
K +P ++ + R + + S+I +IG TPLV++ + K+EG++ + K E P SVKD
Sbjct: 127 KGIPSLLSS--REENIASNITQLIGWTPLVEMKNIAKNEGVQARLVGKMEAYQPLCSVKD 184
Query: 572 RIAYRMFLDAEQKGILKPGKSVIV 643
R A RM DAE+KG++ PG + ++
Sbjct: 185 RSALRMIEDAEEKGLITPGVTTLI 208
>06_01_0358 +
2573241-2573324,2573509-2573636,2573769-2573971,
2574129-2574254,2574522-2574680,2574857-2575050,
2575251-2575376
Length = 339
Score = 65.7 bits (153), Expect = 3e-11
Identities = 28/84 (33%), Positives = 53/84 (63%)
Frame = +2
Query: 392 KDMPHIVRALDRNQKVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKD 571
+ +P ++ + ++ + +DI ++G TPL++L+++ + +G+ + K E P SVKD
Sbjct: 7 RGIPSLLNSSSSDEHIATDITQLVGWTPLIELNRIVRKDGVNARIVGKLESYQPLCSVKD 66
Query: 572 RIAYRMFLDAEQKGILKPGKSVIV 643
R A RM DAE+KG++ PG + +V
Sbjct: 67 RSALRMIEDAEEKGLISPGVTTLV 90
>06_03_0491 -
21383036-21383161,21383246-21383439,21383627-21383785,
21383904-21384029,21384290-21384492,21384691-21384818,
21385691-21385783
Length = 342
Score = 64.9 bits (151), Expect = 5e-11
Identities = 29/82 (35%), Positives = 50/82 (60%)
Frame = +2
Query: 398 MPHIVRALDRNQKVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRI 577
+P ++ + + + S+I +IG TPL+++ +PK EG++ + K E P SVKDR
Sbjct: 12 IPSLLSSAVGEETIASNIAQLIGWTPLIEMKNIPKKEGIQTRLIGKMETYQPLFSVKDRT 71
Query: 578 AYRMFLDAEQKGILKPGKSVIV 643
A M DAE+KG++ PG + ++
Sbjct: 72 ALSMIEDAEEKGLITPGVTTLI 93
>04_01_0339 -
4429742-4429840,4429932-4430012,4430232-4430291,
4430715-4430794,4430923-4430974,4431045-4431182,
4431449-4431712,4432031-4432088,4433261-4433370,
4433604-4433795
Length = 377
Score = 61.3 bits (142), Expect = 6e-10
Identities = 31/70 (44%), Positives = 43/70 (61%)
Frame = +2
Query: 434 KVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAEQKG 613
K+ +IG TP+V L+K+ EG + AK EFL P SVKDR A M DAE+KG
Sbjct: 57 KIRDSASQLIGRTPMVYLNKVT--EGCGARIAAKLEFLQPSFSVKDRPAISMLEDAEKKG 114
Query: 614 ILKPGKSVIV 643
++ PGK+ ++
Sbjct: 115 LITPGKTTLI 124
>03_02_0162 +
6053144-6053365,6053474-6053548,6054477-6054623,
6054749-6055300,6055387-6055622,6055914-6056130
Length = 482
Score = 60.5 bits (140), Expect = 1e-09
Identities = 29/63 (46%), Positives = 42/63 (66%)
Frame = +2
Query: 449 ILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAEQKGILKPG 628
++ IGNTPL++++ L G CE+ K EFLNPGGSVKDR+A ++ +A + G L G
Sbjct: 52 LVEAIGNTPLIRINSLSDATG--CEILGKAEFLNPGGSVKDRVAVKIIEEALESGDLLCG 109
Query: 629 KSV 637
+V
Sbjct: 110 GTV 112
>06_03_0486 -
21344680-21344805,21344922-21345115,21350027-21350185,
21350428-21350553,21350784-21350986,21351169-21351296,
21351631-21351741
Length = 348
Score = 59.3 bits (137), Expect = 3e-09
Identities = 26/71 (36%), Positives = 44/71 (61%)
Frame = +2
Query: 431 QKVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAEQK 610
+ + S++ +IG TPL+++ + K EG++ + K E P SVKDR A M DAE+K
Sbjct: 29 EAIASNVAQLIGWTPLIEMKNIAKKEGIQARLVGKMEAYQPLFSVKDRTALGMVEDAEEK 88
Query: 611 GILKPGKSVIV 643
G++ PG + ++
Sbjct: 89 GLITPGVTTLI 99
>02_02_0105 +
6810839-6810913,6811005-6811132,6811562-6811764,
6811829-6811957,6812348-6812506,6812610-6812695,
6812908-6813042
Length = 304
Score = 58.0 bits (134), Expect = 6e-09
Identities = 28/79 (35%), Positives = 48/79 (60%)
Frame = +2
Query: 392 KDMPHIVRALDRNQKVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKD 571
K +P ++ + + + + S+I +IG TPL++L + K +G+ + K E P SVKD
Sbjct: 6 KGVPSLLSS--QGECIASNITQLIGWTPLIELKNIAKKDGIAARLVGKIEPYQPLSSVKD 63
Query: 572 RIAYRMFLDAEQKGILKPG 628
R A R+ DAE++G++ PG
Sbjct: 64 RSALRLIEDAEERGLISPG 82
>01_06_1119 -
34640611-34640721,34640995-34641075,34641437-34641496,
34641596-34641645,34641758-34641809,34642462-34642599,
34642716-34642979,34643057-34643114,34643178-34643287,
34643650-34643925
Length = 399
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/69 (39%), Positives = 43/69 (62%)
Frame = +2
Query: 437 VHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAEQKGI 616
+ D+ +IG TP+V L+ + +G + AK E++ P SVKDRI M DAE+KG+
Sbjct: 86 IAQDVTQLIGKTPMVYLNNVV--DGCVANIAAKLEYMGPCRSVKDRIGLSMINDAEEKGL 143
Query: 617 LKPGKSVIV 643
+ P K+++V
Sbjct: 144 IFPNKTILV 152
>01_07_0387 -
43224718-43224810,43224990-43225070,43225676-43225735,
43227129-43227208,43227285-43227336,43227412-43227549,
43227627-43227944,43229381-43229438,43229520-43229629,
43230041-43230280
Length = 409
Score = 56.0 bits (129), Expect = 2e-08
Identities = 28/59 (47%), Positives = 38/59 (64%)
Frame = +2
Query: 455 NVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAEQKGILKPGK 631
++IG TP+V L+ + K G + AK E + P SVKDRI Y M DAE+KG++ PGK
Sbjct: 80 DLIGKTPMVYLNNIVK--GCVANVAAKLEIMEPCCSVKDRIGYSMISDAEEKGLITPGK 136
>11_01_0528 -
4148737-4149483,4149618-4150147,4150238-4150736,
4152041-4152043
Length = 592
Score = 36.7 bits (81), Expect = 0.016
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +2
Query: 341 VDAKNGTSNSARKFFTLKDMPHIVRALDRNQKVHSDILNVIGNTPLVKLSKLP 499
+DA++G N+ + P IV AL + KV +D+LN G+TPL S P
Sbjct: 287 LDAQDGDGNTPLHIAVVAGAPGIVNALLQKGKVQTDVLNDDGHTPLDLASTSP 339
>11_01_0531 - 4192567-4193253,4193900-4194427
Length = 404
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +2
Query: 329 MSNHVDAKNGTSNSARKFFTLKDMPHIVRALDRNQKVHSDILNVIGNTPL 478
M V+A++ N+ + P IV AL R V +D+LN G+TPL
Sbjct: 115 MGGLVNAQDAGGNTPLHLAVVAGAPDIVEALLREGNVQTDVLNDDGHTPL 164
>05_01_0258 + 1984666-1984878,1985019-1985852
Length = 348
Score = 32.3 bits (70), Expect = 0.34
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +2
Query: 440 HSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLN 550
++ + NV LVKLSKLP G K E+ AKC +N
Sbjct: 308 NATLWNVDFGDALVKLSKLPMPAGSKGEIRAKCSAVN 344
>04_03_0354 + 14830325-14830826,14831491-14832416
Length = 475
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +2
Query: 323 SNMSN-HVDAKNGTSNSARKFFTLKDMPHIVRALDRNQKVHSDILNVIGNTPLVKLSKLP 499
+++SN H+D K L+D+P +VR+ DR+ + + ++V PL L
Sbjct: 170 ADLSNGHLDTKMDWIPGMPADLRLRDLPSVVRSTDRDDIMFNFFIDVTATMPLASAVILN 229
Query: 500 KDEGLKCEMYAKCEFLNP 553
+ L + A L P
Sbjct: 230 TFDELDAPLMAAMSALLP 247
>01_02_0063 - 10746968-10747783,10747995-10748222
Length = 347
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2
Query: 476 LVKLSKLPKDEGLKCEMYAKCEFLN 550
L+KLS+LP EG K E+ KC +N
Sbjct: 320 LLKLSQLPMPEGSKGEIRKKCSAIN 344
>06_03_0834 -
25206825-25207075,25207326-25207424,25207531-25208285,
25209073-25209388,25210472-25210514
Length = 487
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +2
Query: 413 RALDRNQKVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIA 580
R +D ++V +++ + TPL++ +L K G ++Y K E +P GS K A
Sbjct: 98 RFIDIPEEV-AEVYKLWRPTPLIRARRLEKLLGTPAKIYYKYEGTSPAGSHKPNTA 152
>05_04_0189 -
18911654-18913207,18913310-18913528,18914034-18914367,
18914425-18914592,18914633-18914724,18914814-18914848,
18915377-18915441,18915565-18915669,18916373-18916434,
18916732-18916860,18918050-18918184,18918336-18918457,
18918808-18918965,18919215-18919372,18919447-18919780,
18919853-18919978,18920213-18920443,18920520-18920692
Length = 1399
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 434 KVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLN 550
KV++D+L+V+ N ++ + K D KC A C+ N
Sbjct: 614 KVYTDVLDVVKNDGILVVPKKENDARCKCCSSAYCKKAN 652
>04_04_1672 - 35242468-35243235,35243481-35243645
Length = 310
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 470 TPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKD 571
T +VKLSK+P+ G K E+ C N G + D
Sbjct: 268 TSIVKLSKVPRPGGNKGEIRRNCFKTNSGARLVD 301
>07_01_0042 -
334417-334431,334563-334688,334852-335136,335220-335368,
336239-336536,337030-337131,337245-337613,337973-338115,
338334-338518,339246-339475,339734-339821,340158-340253,
340397-340512,340604-340852,340950-341175,341411-341622
Length = 962
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -2
Query: 382 EFSRRVRCAIFSIHMVRHVAVYRFYCLYLKFTIHYCINLH 263
+ SRR R I +H++ H+ L L+ I CI H
Sbjct: 727 KLSRRKRAIIGGLHVLAHLTAALLLMLLLELGIEICIRNH 766
>01_02_0058 - 10699702-10700517,10700997-10701206
Length = 341
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 476 LVKLSKLPKDEGLKCEMYAKCEFLN 550
L+KLSKLP G K E+ KC +N
Sbjct: 315 LLKLSKLPMPAGSKGEIRNKCSSIN 339
>08_02_0607 + 19285580-19286138,19286734-19287668
Length = 497
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 323 SNMSN-HVDAKNGTSNSARKFFTLKDMPHIVRALDRNQKVHSDILNVIGNTPL 478
+++SN H+D K L+D+P VR+ DR+ + + ++V PL
Sbjct: 189 ADLSNGHLDTKMDWIPGMPADLRLRDLPSFVRSTDRDDIMFNFFIDVTATMPL 241
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,404,079
Number of Sequences: 37544
Number of extensions: 298050
Number of successful extensions: 593
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 590
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1596695220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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