Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0069
(644 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72518-3|CAB63415.2| 704|Caenorhabditis elegans Hypothetical pr... 78 5e-15
Z49131-7|CAA88980.3| 704|Caenorhabditis elegans Hypothetical pr... 78 5e-15
AC024136-1|AAF35961.1| 755|Caenorhabditis elegans Hypothetical ... 75 4e-14
Z83236-2|CAB05778.1| 337|Caenorhabditis elegans Hypothetical pr... 66 2e-11
AF016425-2|AAB65342.1| 337|Caenorhabditis elegans Hypothetical ... 62 2e-10
U97004-6|AAO26010.1| 304|Caenorhabditis elegans Hypothetical pr... 60 1e-09
U97004-4|AAB52276.1| 337|Caenorhabditis elegans Hypothetical pr... 60 1e-09
Z78415-10|CAB01676.2| 341|Caenorhabditis elegans Hypothetical p... 58 7e-09
Z92829-16|CAE46671.1| 284|Caenorhabditis elegans Hypothetical p... 30 1.6
Z92804-6|CAE46675.1| 284|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z92829-10|CAB07350.2| 319|Caenorhabditis elegans Hypothetical p... 29 2.1
U64840-4|AAB04962.1| 316|Caenorhabditis elegans Serpentine rece... 29 2.8
AF016428-1|AAO26001.1| 330|Caenorhabditis elegans Serpentine re... 29 2.8
AC006731-1|AAF60483.1| 4900|Caenorhabditis elegans Temporarily a... 29 2.8
>Z72518-3|CAB63415.2| 704|Caenorhabditis elegans Hypothetical
protein ZC373.1 protein.
Length = 704
Score = 78.2 bits (184), Expect = 5e-15
Identities = 37/63 (58%), Positives = 45/63 (71%)
Frame = +2
Query: 449 ILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAEQKGILKPG 628
+L+ IG TPLVKL +PK G+KC +Y KCE++N GGS KDRIA RM AE+ G KPG
Sbjct: 382 VLDAIGKTPLVKLQHIPKAHGVKCNVYVKCEYMNAGGSTKDRIAKRMVEIAEKTG--KPG 439
Query: 629 KSV 637
K V
Sbjct: 440 KLV 442
Score = 48.0 bits (109), Expect = 6e-06
Identities = 25/58 (43%), Positives = 37/58 (63%)
Frame = +2
Query: 470 TPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAEQKGILKPGKSVIV 643
TPLV L KL + L+ ++Y K E+LN GS++DR A + F AE+ G+++ G V V
Sbjct: 30 TPLVPLKKLKVEHQLQSDIYVKLEYLNIAGSLEDRTADKAFQFAEEIGVVR-GDEVFV 86
>Z49131-7|CAA88980.3| 704|Caenorhabditis elegans Hypothetical
protein ZC373.1 protein.
Length = 704
Score = 78.2 bits (184), Expect = 5e-15
Identities = 37/63 (58%), Positives = 45/63 (71%)
Frame = +2
Query: 449 ILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAEQKGILKPG 628
+L+ IG TPLVKL +PK G+KC +Y KCE++N GGS KDRIA RM AE+ G KPG
Sbjct: 382 VLDAIGKTPLVKLQHIPKAHGVKCNVYVKCEYMNAGGSTKDRIAKRMVEIAEKTG--KPG 439
Query: 629 KSV 637
K V
Sbjct: 440 KLV 442
Score = 48.0 bits (109), Expect = 6e-06
Identities = 25/58 (43%), Positives = 37/58 (63%)
Frame = +2
Query: 470 TPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAEQKGILKPGKSVIV 643
TPLV L KL + L+ ++Y K E+LN GS++DR A + F AE+ G+++ G V V
Sbjct: 30 TPLVPLKKLKVEHQLQSDIYVKLEYLNIAGSLEDRTADKAFQFAEEIGVVR-GDEVFV 86
>AC024136-1|AAF35961.1| 755|Caenorhabditis elegans Hypothetical
protein F54A3.4 protein.
Length = 755
Score = 74.9 bits (176), Expect = 4e-14
Identities = 36/64 (56%), Positives = 44/64 (68%)
Frame = +2
Query: 437 VHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAEQKGI 616
V +L+ IG TPLVKL +PK G++C +Y KCEFLN GGS KDRIA +M AE+ G
Sbjct: 336 VLDSVLDAIGKTPLVKLQHVPKAHGVRCNVYVKCEFLNAGGSTKDRIAKKMVEIAEKTG- 394
Query: 617 LKPG 628
KPG
Sbjct: 395 -KPG 397
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = +2
Query: 470 TPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMF 592
T LV L KL + LK ++Y K E+LN GS++DR A+R F
Sbjct: 21 TQLVPLKKLKAEFQLKSDIYVKLEYLNISGSLEDRAAHRAF 61
>Z83236-2|CAB05778.1| 337|Caenorhabditis elegans Hypothetical
protein K10H10.2 protein.
Length = 337
Score = 66.1 bits (154), Expect = 2e-11
Identities = 31/62 (50%), Positives = 45/62 (72%)
Frame = +2
Query: 458 VIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAEQKGILKPGKSV 637
+IGNTPL+KL+K+ KD G + K E++NP SVKDRIA+ M AE+ G++ PGK+V
Sbjct: 13 LIGNTPLLKLNKIGKDLG--ASIAVKVEYMNPACSVKDRIAFNMIDTAEKAGLITPGKTV 70
Query: 638 IV 643
++
Sbjct: 71 LI 72
>AF016425-2|AAB65342.1| 337|Caenorhabditis elegans Hypothetical
protein F59A7.9 protein.
Length = 337
Score = 62.5 bits (145), Expect = 2e-10
Identities = 36/75 (48%), Positives = 46/75 (61%)
Frame = +2
Query: 419 LDRNQKVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLD 598
+ R VH D + +GNTPLV L + K GL + K E+LNP SVKDRIA M D
Sbjct: 1 MSRELMVH-DSGDTVGNTPLVLLRNITK--GLDARIAVKIEYLNPSCSVKDRIAKTMVDD 57
Query: 599 AEQKGILKPGKSVIV 643
AE+ G + PGK+V+V
Sbjct: 58 AEKAGKIVPGKTVLV 72
>U97004-6|AAO26010.1| 304|Caenorhabditis elegans Hypothetical
protein R08E5.2c protein.
Length = 304
Score = 60.1 bits (139), Expect = 1e-09
Identities = 32/63 (50%), Positives = 41/63 (65%)
Frame = +2
Query: 455 NVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAEQKGILKPGKS 634
+ IGNTPLV L + K GL + K E+LNP SVKDRIA M +AE+ G + PGK+
Sbjct: 12 DTIGNTPLVLLRNISK--GLDARIAVKVEYLNPSCSVKDRIAKSMVDEAEKAGTIVPGKT 69
Query: 635 VIV 643
V+V
Sbjct: 70 VLV 72
>U97004-4|AAB52276.1| 337|Caenorhabditis elegans Hypothetical
protein R08E5.2a protein.
Length = 337
Score = 60.1 bits (139), Expect = 1e-09
Identities = 32/63 (50%), Positives = 41/63 (65%)
Frame = +2
Query: 455 NVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAEQKGILKPGKS 634
+ IGNTPLV L + K GL + K E+LNP SVKDRIA M +AE+ G + PGK+
Sbjct: 12 DTIGNTPLVLLRNISK--GLDARIAVKVEYLNPSCSVKDRIAKSMVDEAEKAGTIVPGKT 69
Query: 635 VIV 643
V+V
Sbjct: 70 VLV 72
>Z78415-10|CAB01676.2| 341|Caenorhabditis elegans Hypothetical
protein C17G1.7 protein.
Length = 341
Score = 57.6 bits (133), Expect = 7e-09
Identities = 31/74 (41%), Positives = 45/74 (60%)
Frame = +2
Query: 422 DRNQKVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDA 601
DRN + + +IGNTP+V ++KL K GL + K E++NP GSVKDRI M A
Sbjct: 3 DRNS-IGENAAALIGNTPMVYINKLTK--GLPGTVAVKIEYMNPAGSVKDRIGAAMLAAA 59
Query: 602 EQKGILKPGKSVIV 643
E+ G + PG + ++
Sbjct: 60 EKDGTVIPGVTTLI 73
>Z92829-16|CAE46671.1| 284|Caenorhabditis elegans Hypothetical
protein K05D4.9 protein.
Length = 284
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = -1
Query: 302 VFKIHNSLLYQFTQLAFQFN---FFILFNRRLDRKYSSN*TKIKSSGINYSFAVIHSASR 132
+F + L++ F+ + F+ FFI N + + T +K SG +YS A I A
Sbjct: 5 IFGSYKYLMFAFSTVGIFFSCCDFFIKPNMHITKTSFIIFTDLKRSGYSYSTAQIALAVL 64
Query: 131 CSNQGV 114
CS+ G+
Sbjct: 65 CSSYGL 70
>Z92804-6|CAE46675.1| 284|Caenorhabditis elegans Hypothetical
protein K05D4.9 protein.
Length = 284
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = -1
Query: 302 VFKIHNSLLYQFTQLAFQFN---FFILFNRRLDRKYSSN*TKIKSSGINYSFAVIHSASR 132
+F + L++ F+ + F+ FFI N + + T +K SG +YS A I A
Sbjct: 5 IFGSYKYLMFAFSTVGIFFSCCDFFIKPNMHITKTSFIIFTDLKRSGYSYSTAQIALAVL 64
Query: 131 CSNQGV 114
CS+ G+
Sbjct: 65 CSSYGL 70
>Z92829-10|CAB07350.2| 319|Caenorhabditis elegans Hypothetical
protein F10A3.15 protein.
Length = 319
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = -1
Query: 302 VFKIHNSLLYQFTQLAFQFN---FFILFNRRLDRKYSSN*TKIKSSGINYSFAVIHSASR 132
+F + L++ F+ + F+ FFI N + + T +K SG +YS A I A
Sbjct: 39 IFGNYKYLMFAFSTVGIFFSCCDFFIKPNMHITKTSFIIFTDLKRSGYSYSTAQIALAIL 98
Query: 131 CSNQGV 114
CS+ G+
Sbjct: 99 CSSYGL 104
>U64840-4|AAB04962.1| 316|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 68 protein.
Length = 316
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 323 CLSFLLLVFKIHNSLLYQFTQLAFQFNFFILFN 225
C FLL + K++ + Y+ QLA N F+ N
Sbjct: 38 CFQFLLGISKVYANSFYRLVQLALLTNTFVYLN 70
>AF016428-1|AAO26001.1| 330|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 66 protein.
Length = 330
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 323 CLSFLLLVFKIHNSLLYQFTQLAFQFNFFILFN 225
C FLL + K++ + Y+ QLA N F+ N
Sbjct: 38 CFQFLLGISKVYANSFYRLVQLALLTNTFVYLN 70
>AC006731-1|AAF60483.1| 4900|Caenorhabditis elegans Temporarily
assigned gene nameprotein 80 protein.
Length = 4900
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -3
Query: 555 PGLRNSHFAYISHFNPSSLGNLDSFTS 475
P LR + Y SHF+PS + +L S TS
Sbjct: 4617 PPLRRTSITYTSHFSPSVIRDLRSSTS 4643
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,281,061
Number of Sequences: 27780
Number of extensions: 301297
Number of successful extensions: 705
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 700
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -