Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0069
         (644 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...   112   3e-27
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    24   1.4  
DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              22   5.8  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       22   5.8  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    21   7.7  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   7.7  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   7.7  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   7.7  

>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score =  112 bits (269), Expect = 3e-27
 Identities = 51/81 (62%), Positives = 62/81 (76%), Gaps = 1/81 (1%)
 Frame = +2

Query: 401 PHIVRALDRNQ-KVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRI 577
           PH  R  + +  K+  DIL  IG TPL+KL+ +PK  G+KCE+YAKCEFLNPGGSVKDRI
Sbjct: 22  PHTCRTKNGDYTKIMPDILTAIGQTPLIKLNNIPKSYGIKCEIYAKCEFLNPGGSVKDRI 81

Query: 578 AYRMFLDAEQKGILKPGKSVI 640
           AYRM  DAE KG+LKPG ++I
Sbjct: 82  AYRMIQDAEDKGLLKPGCTII 102


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = -2

Query: 367 VRCAIFSIHMVRHVAVYRFYCLYLKFTIHYCINL 266
           V  ++ + H+  H  VY++ C    +   YC +L
Sbjct: 27  VNKSMLNSHLKSHSNVYQYRCANCTYATKYCHSL 60


>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 12/53 (22%), Positives = 20/53 (37%)
 Frame = +2

Query: 431 QKVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRM 589
           +K   +    I +    +  + P+DE LKC      E  N       +I Y +
Sbjct: 41  KKCIGETKTTIEDVEATEYGEFPEDEKLKCYFNCVLEKFNVMDKKNGKIRYNL 93


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -2

Query: 340 MVRHVAVYRFYCLYLKFTIHYCINL 266
           M R +A +R + LYL   +  CI++
Sbjct: 110 MCRIMAFFRMFGLYLSSFVLVCISM 134


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 25  THTQYYKYPTSINLSF 72
           TH  YY  P+S NL +
Sbjct: 261 THNLYYNSPSSENLYY 276


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = +1

Query: 1   VGAYTYLTTHTQYYKYPTSINLSFS*IPFIQEET 102
           + AYT L+   +YY Y      +F+ I  +  ++
Sbjct: 285 IEAYTNLSMTMKYYDYGADFPFNFAFIKNVSRDS 318


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 283 EL*ILNTSNKNDKQQHVEPCGC 348
           EL ++ +  K+D+ +  EP GC
Sbjct: 600 ELFVMVSDYKDDRVEQNEPIGC 621


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = +1

Query: 1   VGAYTYLTTHTQYYKYPTSINLSFS*IPFIQEET 102
           + AYT L+   +YY Y      +F+ I  +  ++
Sbjct: 285 IEAYTNLSMTMKYYDYGADFPFNFAFIKNVSRDS 318


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,160
Number of Sequences: 438
Number of extensions: 3820
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19438227
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)