Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0069
(644 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g22460.1 68416.m02839 cysteine synthase, putative / O-acetyls... 72 4e-13
At5g28030.2 68418.m03377 cysteine synthase, putative / O-acetyls... 69 4e-12
At5g28030.1 68418.m03376 cysteine synthase, putative / O-acetyls... 69 4e-12
At1g55880.2 68414.m06409 pyridoxal-5'-phosphate-dependent enzyme... 69 4e-12
At1g55880.1 68414.m06408 pyridoxal-5'-phosphate-dependent enzyme... 69 4e-12
At4g14880.2 68417.m02286 cysteine synthase / O-acetylserine (thi... 67 8e-12
At4g14880.1 68417.m02285 cysteine synthase / O-acetylserine (thi... 67 8e-12
At5g28020.2 68418.m03375 cysteine synthase, putative / O-acetyls... 67 1e-11
At5g28020.1 68418.m03374 cysteine synthase, putative / O-acetyls... 67 1e-11
At3g59760.3 68416.m06669 cysteine synthase, mitochondrial, putat... 64 1e-10
At3g59760.2 68416.m06668 cysteine synthase, mitochondrial, putat... 64 1e-10
At3g59760.1 68416.m06667 cysteine synthase, mitochondrial, putat... 64 1e-10
At3g04940.1 68416.m00536 cysteine synthase, putative / O-acetyls... 63 2e-10
At2g43750.1 68415.m05439 cysteine synthase, chloroplast / O-acet... 61 5e-10
At3g03630.1 68416.m00366 cysteine synthase, chloroplast, putativ... 53 2e-07
At3g61440.1 68416.m06881 cysteine synthase, putative / O-acetyls... 51 6e-07
At3g20940.1 68416.m02647 cytochrome P450 family protein similar ... 32 0.37
At5g35750.1 68418.m04281 histidine kinase (AHK2) identical to hi... 29 2.0
At1g29750.2 68414.m03638 leucine-rich repeat transmembrane prote... 29 2.6
At1g29750.1 68414.m03637 leucine-rich repeat transmembrane prote... 29 2.6
At3g60400.1 68416.m06755 mitochondrial transcription termination... 28 4.6
At3g53360.1 68416.m05889 pentatricopeptide (PPR) repeat-containi... 28 4.6
At3g14980.1 68416.m01894 PHD finger transcription factor, putati... 28 6.1
At3g20950.1 68416.m02648 cytochrome P450 family protein similar ... 27 8.1
>At3g22460.1 68416.m02839 cysteine synthase, putative /
O-acetylserine (thiol)-lyase, putative / O-acetylserine
sulfhydrylase, putative nearly identical over 185 amino
acids to SP|P47998 Cysteine synthase (EC 4.2.99.8)
(O-acetylserine sulfhydrylase) (O-acetylserine
(Thiol)-lyase) {Arabidopsis thaliana}
Length = 188
Score = 71.7 bits (168), Expect = 4e-13
Identities = 35/70 (50%), Positives = 47/70 (67%)
Frame = +2
Query: 434 KVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAEQKG 613
K+ D+ +IGNTPLV L+K+ KD + AK E + P SVKDRI Y M DAE KG
Sbjct: 7 KIAKDVTELIGNTPLVYLNKVAKD--CVGHVAAKLEMMEPCSSVKDRIGYSMIADAEAKG 64
Query: 614 ILKPGKSVIV 643
++KPG+SV++
Sbjct: 65 LIKPGESVLI 74
>At5g28030.2 68418.m03377 cysteine synthase, putative /
O-acetylserine (thiol)-lyase, putative / O-acetylserine
sulfhydrylase, putative similar to O-acetylserine(thiol)
lyase [Brassica juncea] GI:2245144; contains Pfam
profile PF00291: Pyridoxal-phosphate dependent enzyme
Length = 323
Score = 68.5 bits (160), Expect = 4e-12
Identities = 31/69 (44%), Positives = 46/69 (66%)
Frame = +2
Query: 437 VHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAEQKGI 616
+ +D+ +IGNTP+V L+K+ +G + AK E + P S+KDRIAY M DAE KG+
Sbjct: 7 IKNDVTELIGNTPMVYLNKIV--DGCVARIAAKLEMMEPCSSIKDRIAYSMIKDAEDKGL 64
Query: 617 LKPGKSVIV 643
+ PGKS ++
Sbjct: 65 ITPGKSTLI 73
>At5g28030.1 68418.m03376 cysteine synthase, putative /
O-acetylserine (thiol)-lyase, putative / O-acetylserine
sulfhydrylase, putative similar to O-acetylserine(thiol)
lyase [Brassica juncea] GI:2245144; contains Pfam
profile PF00291: Pyridoxal-phosphate dependent enzyme
Length = 323
Score = 68.5 bits (160), Expect = 4e-12
Identities = 31/69 (44%), Positives = 46/69 (66%)
Frame = +2
Query: 437 VHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAEQKGI 616
+ +D+ +IGNTP+V L+K+ +G + AK E + P S+KDRIAY M DAE KG+
Sbjct: 7 IKNDVTELIGNTPMVYLNKIV--DGCVARIAAKLEMMEPCSSIKDRIAYSMIKDAEDKGL 64
Query: 617 LKPGKSVIV 643
+ PGKS ++
Sbjct: 65 ITPGKSTLI 73
>At1g55880.2 68414.m06409 pyridoxal-5'-phosphate-dependent enzyme,
beta family protein similar to SP|P50867 Cysteine
synthase (EC 4.2.99.8) (O-acetylserine sulfhydrylase)
(O-acetylserine (Thiol)-lyase) [Aspergillus nidulans]
{Emericella nidulans}; contains Pfam profile PF00291:
Pyridoxal-phosphate dependent enzyme
Length = 348
Score = 68.5 bits (160), Expect = 4e-12
Identities = 30/64 (46%), Positives = 46/64 (71%)
Frame = +2
Query: 437 VHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAEQKGI 616
+ + +++ IGNTPL++++ L + G CE+ KCEFLNPGGSVKDR+A ++ +A + G
Sbjct: 40 MRNGLVDAIGNTPLIRINSLSEATG--CEILGKCEFLNPGGSVKDRVAVKIIQEALESGK 97
Query: 617 LKPG 628
L PG
Sbjct: 98 LFPG 101
>At1g55880.1 68414.m06408 pyridoxal-5'-phosphate-dependent enzyme,
beta family protein similar to SP|P50867 Cysteine
synthase (EC 4.2.99.8) (O-acetylserine sulfhydrylase)
(O-acetylserine (Thiol)-lyase) [Aspergillus nidulans]
{Emericella nidulans}; contains Pfam profile PF00291:
Pyridoxal-phosphate dependent enzyme
Length = 421
Score = 68.5 bits (160), Expect = 4e-12
Identities = 30/64 (46%), Positives = 46/64 (71%)
Frame = +2
Query: 437 VHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAEQKGI 616
+ + +++ IGNTPL++++ L + G CE+ KCEFLNPGGSVKDR+A ++ +A + G
Sbjct: 40 MRNGLVDAIGNTPLIRINSLSEATG--CEILGKCEFLNPGGSVKDRVAVKIIQEALESGK 97
Query: 617 LKPG 628
L PG
Sbjct: 98 LFPG 101
>At4g14880.2 68417.m02286 cysteine synthase / O-acetylserine
(thiol)-lyase / O-acetylserine sulfhydrylase (OAS1)
nearly identical to SP|P47998 Cysteine synthase (EC
4.2.99.8) (O-acetylserine sulfhydrylase) (O-acetylserine
(Thiol)-lyase) {Arabidopsis thaliana}; identical to cDNA
O-acetylserine lyase (At.OAS.5-8) GI:6983573
Length = 322
Score = 67.3 bits (157), Expect = 8e-12
Identities = 32/70 (45%), Positives = 47/70 (67%)
Frame = +2
Query: 434 KVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAEQKG 613
++ D+ +IGNTPLV L+ + EG + AK E + P SVKDRI + M DAE+KG
Sbjct: 4 RIAKDVTELIGNTPLVYLNNVA--EGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKG 61
Query: 614 ILKPGKSVIV 643
++KPG+SV++
Sbjct: 62 LIKPGESVLI 71
>At4g14880.1 68417.m02285 cysteine synthase / O-acetylserine
(thiol)-lyase / O-acetylserine sulfhydrylase (OAS1)
nearly identical to SP|P47998 Cysteine synthase (EC
4.2.99.8) (O-acetylserine sulfhydrylase) (O-acetylserine
(Thiol)-lyase) {Arabidopsis thaliana}; identical to cDNA
O-acetylserine lyase (At.OAS.5-8) GI:6983573
Length = 322
Score = 67.3 bits (157), Expect = 8e-12
Identities = 32/70 (45%), Positives = 47/70 (67%)
Frame = +2
Query: 434 KVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAEQKG 613
++ D+ +IGNTPLV L+ + EG + AK E + P SVKDRI + M DAE+KG
Sbjct: 4 RIAKDVTELIGNTPLVYLNNVA--EGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKG 61
Query: 614 ILKPGKSVIV 643
++KPG+SV++
Sbjct: 62 LIKPGESVLI 71
>At5g28020.2 68418.m03375 cysteine synthase, putative /
O-acetylserine (thiol)-lyase, putative / O-acetylserine
sulfhydrylase, putative similar to O-acetylserine(thiol)
lyase (EC 4.2.99.8) [Brassica juncea] GI:2245144;
contains Pfam profile PF00291: Pyridoxal-phosphate
dependent enzyme
Length = 323
Score = 66.9 bits (156), Expect = 1e-11
Identities = 32/69 (46%), Positives = 45/69 (65%)
Frame = +2
Query: 437 VHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAEQKGI 616
+ +DI +IGNTP+V L+ + +G + AK E + P SVKDRIAY M DAE KG+
Sbjct: 7 IKNDITELIGNTPMVYLNNVV--DGCVARIAAKLEMMEPCSSVKDRIAYSMIKDAEDKGL 64
Query: 617 LKPGKSVIV 643
+ PGKS ++
Sbjct: 65 ITPGKSTLI 73
>At5g28020.1 68418.m03374 cysteine synthase, putative /
O-acetylserine (thiol)-lyase, putative / O-acetylserine
sulfhydrylase, putative similar to O-acetylserine(thiol)
lyase (EC 4.2.99.8) [Brassica juncea] GI:2245144;
contains Pfam profile PF00291: Pyridoxal-phosphate
dependent enzyme
Length = 323
Score = 66.9 bits (156), Expect = 1e-11
Identities = 32/69 (46%), Positives = 45/69 (65%)
Frame = +2
Query: 437 VHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAEQKGI 616
+ +DI +IGNTP+V L+ + +G + AK E + P SVKDRIAY M DAE KG+
Sbjct: 7 IKNDITELIGNTPMVYLNNVV--DGCVARIAAKLEMMEPCSSVKDRIAYSMIKDAEDKGL 64
Query: 617 LKPGKSVIV 643
+ PGKS ++
Sbjct: 65 ITPGKSTLI 73
>At3g59760.3 68416.m06669 cysteine synthase, mitochondrial, putative
/ O-acetylserine (thiol)-lyase, putative /
O-acetylserine sulfhydrylase, putative similar to
SP|Q43725 Cysteine synthase, mitochondrial precursor (EC
4.2.99.8) (O- acetylserine sulfhydrylase)
(O-acetylserine (Thiol)-lyase) {Arabidopsis thaliana}
Length = 430
Score = 63.7 bits (148), Expect = 1e-10
Identities = 32/69 (46%), Positives = 43/69 (62%)
Frame = +2
Query: 437 VHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAEQKGI 616
+ ++ +IG TP+V L+ + K G + AK E + P SVKDRI Y M DAEQKG
Sbjct: 113 IADNVSQLIGKTPMVYLNSIAK--GCVANIAAKLEIMEPCCSVKDRIGYSMVTDAEQKGF 170
Query: 617 LKPGKSVIV 643
+ PGKSV+V
Sbjct: 171 ISPGKSVLV 179
>At3g59760.2 68416.m06668 cysteine synthase, mitochondrial, putative
/ O-acetylserine (thiol)-lyase, putative /
O-acetylserine sulfhydrylase, putative similar to
SP|Q43725 Cysteine synthase, mitochondrial precursor (EC
4.2.99.8) (O- acetylserine sulfhydrylase)
(O-acetylserine (Thiol)-lyase) {Arabidopsis thaliana}
Length = 432
Score = 63.7 bits (148), Expect = 1e-10
Identities = 32/69 (46%), Positives = 43/69 (62%)
Frame = +2
Query: 437 VHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAEQKGI 616
+ ++ +IG TP+V L+ + K G + AK E + P SVKDRI Y M DAEQKG
Sbjct: 113 IADNVSQLIGKTPMVYLNSIAK--GCVANIAAKLEIMEPCCSVKDRIGYSMVTDAEQKGF 170
Query: 617 LKPGKSVIV 643
+ PGKSV+V
Sbjct: 171 ISPGKSVLV 179
>At3g59760.1 68416.m06667 cysteine synthase, mitochondrial, putative
/ O-acetylserine (thiol)-lyase, putative /
O-acetylserine sulfhydrylase, putative similar to
SP|Q43725 Cysteine synthase, mitochondrial precursor (EC
4.2.99.8) (O- acetylserine sulfhydrylase)
(O-acetylserine (Thiol)-lyase) {Arabidopsis thaliana}
Length = 433
Score = 63.7 bits (148), Expect = 1e-10
Identities = 32/69 (46%), Positives = 43/69 (62%)
Frame = +2
Query: 437 VHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAEQKGI 616
+ ++ +IG TP+V L+ + K G + AK E + P SVKDRI Y M DAEQKG
Sbjct: 113 IADNVSQLIGKTPMVYLNSIAK--GCVANIAAKLEIMEPCCSVKDRIGYSMVTDAEQKGF 170
Query: 617 LKPGKSVIV 643
+ PGKSV+V
Sbjct: 171 ISPGKSVLV 179
>At3g04940.1 68416.m00536 cysteine synthase, putative /
O-acetylserine (thiol)-lyase, putative / O-acetylserine
sulfhydrylase, putative similar to O-acetylserine(thiol)
lyase (EC 4.2.99.8) [Brassica juncea] GI:2245144;
contains Pfam profile PF00291: Pyridoxal-phosphate
dependent enzyme
Length = 324
Score = 62.9 bits (146), Expect = 2e-10
Identities = 30/69 (43%), Positives = 43/69 (62%)
Frame = +2
Query: 437 VHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAEQKGI 616
+ D +IGNTP+V L+ + +G + AK E + P SVK+RIAY M DAE KG+
Sbjct: 8 IKDDATQLIGNTPMVYLNNIV--DGCVARIAAKLEMMEPCSSVKERIAYGMIKDAEDKGL 65
Query: 617 LKPGKSVIV 643
+ PGKS ++
Sbjct: 66 ITPGKSTLI 74
>At2g43750.1 68415.m05439 cysteine synthase, chloroplast /
O-acetylserine (thiol)-lyase / O-acetylserine
sulfhydrylase / cpACS1 (OASB) identical to SP|P47999
Cysteine synthase, chloroplast precursor (EC 4.2.99.8)
(O-acetylserine sulfhydrylase) (O-acetylserine
(Thiol)-lyase) (cpACS1) {Arabidopsis thaliana};
identical to cDNA O-acetylserine lyase (At.OAS.7-4)
GI:6983575
Length = 392
Score = 61.3 bits (142), Expect = 5e-10
Identities = 31/62 (50%), Positives = 41/62 (66%)
Frame = +2
Query: 458 VIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAEQKGILKPGKSV 637
+IG TP+V L+ + K G + AK E + P SVKDRI Y M DAE+KG++ PGKSV
Sbjct: 82 LIGKTPMVYLNNVVK--GCVASVAAKLEIMEPCCSVKDRIGYSMITDAEEKGLITPGKSV 139
Query: 638 IV 643
+V
Sbjct: 140 LV 141
>At3g03630.1 68416.m00366 cysteine synthase, chloroplast, putative /
O-acetylserine (thiol)-lyase, putative / O-acetylserine
sulfhydrylase, putative identical to SP|O22682 Probable
cysteine synthase, chloroplast precursor {Arabidopsis
thaliana}, similar to SP|P31300 Cysteine synthase,
chloroplast precursor {Capsicum annuum}
Length = 404
Score = 52.8 bits (121), Expect = 2e-07
Identities = 30/86 (34%), Positives = 49/86 (56%)
Frame = +2
Query: 386 TLKDMPHIVRALDRNQKVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSV 565
T+ + HI + N + D+ +IG+TP+V L+++ +G ++ AK E + P SV
Sbjct: 84 TVAEEQHIAESETVN--IAEDVTQLIGSTPMVYLNRVT--DGCLADIAAKLESMEPCRSV 139
Query: 566 KDRIAYRMFLDAEQKGILKPGKSVIV 643
KDRI M +AE G + P K+V+V
Sbjct: 140 KDRIGLSMINEAENSGAITPRKTVLV 165
>At3g61440.1 68416.m06881 cysteine synthase, putative /
O-acetylserine (thiol)-lyase, putative / O-acetylserine
sulfhydrylase, putative identical to cysteine synthase
(EC 4.2.99.8) [Arabidopsis thaliana] GI:5824334;
contains Pfam profile PF00291: Pyridoxal-phosphate
dependent enzyme
Length = 368
Score = 51.2 bits (117), Expect = 6e-07
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Frame = +2
Query: 362 SNSARKFFTLKDMPHIVRALDRNQK------VHSDILNVIGNTPLVKLSKLPKDEGLKCE 523
S++ RK F+ P + L K D +IG TPLV L+K+ EG +
Sbjct: 18 SHTVRKLFSTVGSPSFAQRLRDLPKDFPSTNAKRDASLLIGKTPLVFLNKVT--EGCEAY 75
Query: 524 MYAKCEFLNPGGSVKDRIAYRMFLDAEQKGILKPGKSVIV 643
+ AK E P S+KDR A M DAE+K ++ PGK+ ++
Sbjct: 76 VAAKQEHFQPTCSIKDRPAIAMIADAEKKKLIIPGKTTLI 115
>At3g20940.1 68416.m02647 cytochrome P450 family protein similar to
Cytochrome P450 93A3 (P450 CP5) (SP:O81973) [Glycine
max]; similar to cytochrome P450 (SP:H71417)
[Arabidopsis thaliana]
Length = 523
Score = 31.9 bits (69), Expect = 0.37
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +2
Query: 431 QKVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLD-AEQ 607
Q++ +I +V+GNT L++ + LP L+ + L+P GS I+ RMF + E
Sbjct: 336 QRLREEIESVVGNTRLIQENDLPNLPYLQAVVKEGLR-LHPPGS----ISVRMFQERCEL 390
Query: 608 KGILKPGKSVIV 643
KG P K+++V
Sbjct: 391 KGFYIPEKTLLV 402
>At5g35750.1 68418.m04281 histidine kinase (AHK2) identical to
histidine kinase AHK2 [Arabidopsis thaliana]
gi|13537196|dbj|BAB40774
Length = 1176
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -1
Query: 440 VPSDFDPVPLQCEACPLV*RIFSQSSMCH 354
VP +FDP P+Q E P+ IF+Q ++ H
Sbjct: 365 VPENFDPAPIQDEYAPV---IFAQETVSH 390
>At1g29750.2 68414.m03638 leucine-rich repeat transmembrane protein
kinase, putative / serine/threonine kinase, putative
(RKF1) similar to receptor-like serine/threonine kinase
GI:2465923 from [Arabidopsis thaliana]; identical to
cDNA receptor-like serine/threonine kinase (RKF1)
GI:2465922
Length = 1021
Score = 29.1 bits (62), Expect = 2.6
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 452 LNVIGNTPLVKLSK-LPKDEGLKCEMYAKCEFLNPGGS 562
LN+ +T K SK LP + KC Y+ C +N GGS
Sbjct: 388 LNLFQSTSTKKSSKFLPCIKDFKCPRYSSCLHVNCGGS 425
>At1g29750.1 68414.m03637 leucine-rich repeat transmembrane protein
kinase, putative / serine/threonine kinase, putative
(RKF1) similar to receptor-like serine/threonine kinase
GI:2465923 from [Arabidopsis thaliana]; identical to
cDNA receptor-like serine/threonine kinase (RKF1)
GI:2465922
Length = 1006
Score = 29.1 bits (62), Expect = 2.6
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 452 LNVIGNTPLVKLSK-LPKDEGLKCEMYAKCEFLNPGGS 562
LN+ +T K SK LP + KC Y+ C +N GGS
Sbjct: 373 LNLFQSTSTKKSSKFLPCIKDFKCPRYSSCLHVNCGGS 410
>At3g60400.1 68416.m06755 mitochondrial transcription termination
factor-related / mTERF-related contains Pfam profile
PF02536: mTERF
Length = 558
Score = 28.3 bits (60), Expect = 4.6
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = +2
Query: 389 LKDMPHIVRALDRNQKVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVK 568
LK++P+++RA+D ++++ DIL + L + + DE L+ E E L + +
Sbjct: 336 LKNLPYVLRAIDLHERIF-DILKNGNHHLLASYTLMDPDEDLEREYQEGLEELQNSRTKR 394
Query: 569 DRIAYRMFL 595
I FL
Sbjct: 395 HNIQKLDFL 403
>At3g53360.1 68416.m05889 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 768
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 518 CEMYAKCEFLNPGGSVKDRI 577
C+MYA+C FLN V D+I
Sbjct: 312 CDMYARCGFLNSARRVFDQI 331
>At3g14980.1 68416.m01894 PHD finger transcription factor, putative
contains Pfam profile: PF00628 PHD-finger
Length = 1189
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 353 NGTSNSARKFFTLKDMPHIVRALDRNQKVHSDI 451
N S T+ + H+V +D NQ++HSD+
Sbjct: 389 NLISGCPESVLTVSEGSHLVHDVDANQEIHSDL 421
>At3g20950.1 68416.m02648 cytochrome P450 family protein similar to
Cytochrome P450 93A3 (P450 CP5) (SP:O81973) [Glycine
max];
Length = 526
Score = 27.5 bits (58), Expect = 8.1
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Frame = +2
Query: 356 GTSNSARKF-FTLKDMPHIVRALDRNQKVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYA 532
GT SA+ +T+ ++ + L+R + +I +V+GNT LV+ + LP L+ +
Sbjct: 316 GTDTSAQTIEWTMAELINNPNILER---LREEIESVVGNTRLVQETDLPNLPYLQAVVKE 372
Query: 533 KCEFLNPGGSVKDRIAYRMFLD-AEQKGILKPGKSVIV 643
L+P G+V R F + E KG P K+++V
Sbjct: 373 GLR-LHPPGAV----FLRTFQERCELKGFYIPEKTLLV 405
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,951,867
Number of Sequences: 28952
Number of extensions: 258520
Number of successful extensions: 576
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 565
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1334473344
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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