Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0065
         (748 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ062762-1|AAY56635.1|  665|Drosophila melanogaster unknown prot...   217   1e-56
AY070507-1|AAL47978.1|  516|Drosophila melanogaster GH09538p pro...   217   1e-56
AE014296-2976|AAF49293.1|  665|Drosophila melanogaster CG7441-PA...   217   1e-56
BT015232-1|AAT94461.1|  965|Drosophila melanogaster RE10852p pro...    32   0.95 
AE013599-3000|AAF57476.3| 1222|Drosophila melanogaster CG8920-PC...    32   0.95 
AE013599-2999|AAF57477.3| 1222|Drosophila melanogaster CG8920-PB...    32   0.95 
DQ780943-1|ABH07113.1|  910|Drosophila melanogaster prominin pro...    29   6.7  
BT029279-1|ABK30916.1| 1066|Drosophila melanogaster IP13255p pro...    29   6.7  
AE014296-778|AAX52730.2|  660|Drosophila melanogaster CG33545-PA...    29   6.7  
AE013599-3867|AAM68313.1|  670|Drosophila melanogaster CG30164-P...    29   6.7  

>DQ062762-1|AAY56635.1|  665|Drosophila melanogaster unknown
           protein.
          Length = 665

 Score =  217 bits (531), Expect = 1e-56
 Identities = 99/173 (57%), Positives = 130/173 (75%)
 Frame = +3

Query: 225 MNAANENSQVEEWPRRVVSGIQPTGSLHVGNYFGAIRRCVRLQQQGNDLTLFIADLHSLT 404
           +N+ +E      WPR+V SGIQPTGSLH+GNY GA+R+ V+LQ   +D+T+ I DLHS+T
Sbjct: 67  VNSGHEEHNTR-WPRKVFSGIQPTGSLHLGNYLGAVRKWVQLQNARDDVTVCIVDLHSIT 125

Query: 405 AQQNPEVLQNNILELTAYLLASGIDPEQSTFFVQSAVTRHAELCWLLACLATNARLAHLP 584
              NP +L+ NI  + A LLA GIDP +ST FVQSAV  HAE  W+L+ L T  RLA LP
Sbjct: 126 MPHNPPLLRENIFTMAATLLACGIDPTKSTLFVQSAVAEHAEFNWILSSLTTMPRLAQLP 185

Query: 585 QYKEKSAKMKEVPIGLLLYPVLQAADVLIYRGTHVPVGADQIQHLQVASQLVK 743
           Q++EKS  +K+VP+GL +YPVLQAAD+++Y+ THVPVGADQIQH+Q+A  L +
Sbjct: 186 QFREKSRLLKDVPLGLYVYPVLQAADIMLYKSTHVPVGADQIQHIQLAQHLAR 238


>AY070507-1|AAL47978.1|  516|Drosophila melanogaster GH09538p
           protein.
          Length = 516

 Score =  217 bits (531), Expect = 1e-56
 Identities = 99/173 (57%), Positives = 130/173 (75%)
 Frame = +3

Query: 225 MNAANENSQVEEWPRRVVSGIQPTGSLHVGNYFGAIRRCVRLQQQGNDLTLFIADLHSLT 404
           +N+ +E      WPR+V SGIQPTGSLH+GNY GA+R+ V+LQ   +D+T+ I DLHS+T
Sbjct: 67  VNSGHEEHNTR-WPRKVFSGIQPTGSLHLGNYLGAVRKWVQLQNARDDVTVCIVDLHSIT 125

Query: 405 AQQNPEVLQNNILELTAYLLASGIDPEQSTFFVQSAVTRHAELCWLLACLATNARLAHLP 584
              NP +L+ NI  + A LLA GIDP +ST FVQSAV  HAE  W+L+ L T  RLA LP
Sbjct: 126 MPHNPPLLRENIFTMAATLLACGIDPTKSTLFVQSAVAEHAEFNWILSSLTTMPRLAQLP 185

Query: 585 QYKEKSAKMKEVPIGLLLYPVLQAADVLIYRGTHVPVGADQIQHLQVASQLVK 743
           Q++EKS  +K+VP+GL +YPVLQAAD+++Y+ THVPVGADQIQH+Q+A  L +
Sbjct: 186 QFREKSRLLKDVPLGLYVYPVLQAADIMLYKSTHVPVGADQIQHIQLAQHLAR 238


>AE014296-2976|AAF49293.1|  665|Drosophila melanogaster CG7441-PA
           protein.
          Length = 665

 Score =  217 bits (531), Expect = 1e-56
 Identities = 99/173 (57%), Positives = 130/173 (75%)
 Frame = +3

Query: 225 MNAANENSQVEEWPRRVVSGIQPTGSLHVGNYFGAIRRCVRLQQQGNDLTLFIADLHSLT 404
           +N+ +E      WPR+V SGIQPTGSLH+GNY GA+R+ V+LQ   +D+T+ I DLHS+T
Sbjct: 67  VNSGHEEHNTR-WPRKVFSGIQPTGSLHLGNYLGAVRKWVQLQNARDDVTVCIVDLHSIT 125

Query: 405 AQQNPEVLQNNILELTAYLLASGIDPEQSTFFVQSAVTRHAELCWLLACLATNARLAHLP 584
              NP +L+ NI  + A LLA GIDP +ST FVQSAV  HAE  W+L+ L T  RLA LP
Sbjct: 126 MPHNPPLLRENIFTMAATLLACGIDPTKSTLFVQSAVAEHAEFNWILSSLTTMPRLAQLP 185

Query: 585 QYKEKSAKMKEVPIGLLLYPVLQAADVLIYRGTHVPVGADQIQHLQVASQLVK 743
           Q++EKS  +K+VP+GL +YPVLQAAD+++Y+ THVPVGADQIQH+Q+A  L +
Sbjct: 186 QFREKSRLLKDVPLGLYVYPVLQAADIMLYKSTHVPVGADQIQHIQLAQHLAR 238


>BT015232-1|AAT94461.1|  965|Drosophila melanogaster RE10852p
           protein.
          Length = 965

 Score = 31.9 bits (69), Expect = 0.95
 Identities = 13/28 (46%), Positives = 20/28 (71%)
 Frame = +2

Query: 449 NSIFISKRY*SRTEHILRSVRCYKTCRA 532
           N +FI+ +Y + TEHI+R VR  KT ++
Sbjct: 69  NQVFITAKYNANTEHIVRMVRQQKTSKS 96


>AE013599-3000|AAF57476.3| 1222|Drosophila melanogaster CG8920-PC,
           isoform C protein.
          Length = 1222

 Score = 31.9 bits (69), Expect = 0.95
 Identities = 13/28 (46%), Positives = 20/28 (71%)
 Frame = +2

Query: 449 NSIFISKRY*SRTEHILRSVRCYKTCRA 532
           N +FI+ +Y + TEHI+R VR  KT ++
Sbjct: 69  NQVFITAKYNANTEHIVRMVRQQKTSKS 96


>AE013599-2999|AAF57477.3| 1222|Drosophila melanogaster CG8920-PB,
           isoform B protein.
          Length = 1222

 Score = 31.9 bits (69), Expect = 0.95
 Identities = 13/28 (46%), Positives = 20/28 (71%)
 Frame = +2

Query: 449 NSIFISKRY*SRTEHILRSVRCYKTCRA 532
           N +FI+ +Y + TEHI+R VR  KT ++
Sbjct: 69  NQVFITAKYNANTEHIVRMVRQQKTSKS 96


>DQ780943-1|ABH07113.1|  910|Drosophila melanogaster prominin
           protein.
          Length = 910

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 10/43 (23%), Positives = 23/43 (53%)
 Frame = -1

Query: 484 SGSIPLANKYAVSSKILFCNTSGFCCAVKECKSAINSVKSLPC 356
           SG I L + +A+ + +    T  +CC  +  +  ++ +++ PC
Sbjct: 120 SGFIALMSVFAILALVPLIATCAWCCGRRSTQEEVDHIRNAPC 162


>BT029279-1|ABK30916.1| 1066|Drosophila melanogaster IP13255p
           protein.
          Length = 1066

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 10/43 (23%), Positives = 23/43 (53%)
 Frame = -1

Query: 484 SGSIPLANKYAVSSKILFCNTSGFCCAVKECKSAINSVKSLPC 356
           SG I L + +A+ + +    T  +CC  +  +  ++ +++ PC
Sbjct: 121 SGFIALMSVFAILALVPLIATCAWCCGRRSTQEEVDHIRNAPC 163


>AE014296-778|AAX52730.2|  660|Drosophila melanogaster CG33545-PA
           protein.
          Length = 660

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 636 LYPVLQAADVLIYRGTHVPVGADQIQHLQVASQ 734
           LY VLQ A +L Y  T + +G D +Q L  A +
Sbjct: 156 LYRVLQRASLLAYYDTLLEMGGDDVQQLYDAGE 188


>AE013599-3867|AAM68313.1|  670|Drosophila melanogaster CG30164-PA
           protein.
          Length = 670

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 10/43 (23%), Positives = 23/43 (53%)
 Frame = -1

Query: 484 SGSIPLANKYAVSSKILFCNTSGFCCAVKECKSAINSVKSLPC 356
           SG I L + +A+ + +    T  +CC  +  +  ++ +++ PC
Sbjct: 33  SGFIALMSVFAILALVPLIATCAWCCGRRSTQEEVDHIRNAPC 75


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,135,818
Number of Sequences: 53049
Number of extensions: 711864
Number of successful extensions: 1648
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1648
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3396574665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)