Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0060
(395 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0285 - 2115051-2115146,2115220-2115306,2115417-2115503,211... 118 2e-27
12_01_0288 - 2160981-2161076,2161150-2161236,2161333-2161419,216... 112 8e-26
05_01_0243 - 1806770-1806832,1806942-1807061,1807275-1807457,180... 100 4e-22
06_01_0414 + 2948868-2948998,2949136-2949202,2949442-2949531,295... 95 2e-20
11_06_0086 + 19914234-19914382,19914590-19914653,19914793-199148... 93 1e-19
01_06_0120 + 26622285-26622433,26623156-26623219,26623310-266233... 87 6e-18
11_01_0439 + 3353516-3353962,3354403-3354483,3354675-3354947,335... 72 1e-13
12_01_0441 + 3484003-3484374,3485071-3485151,3485242-3485514,348... 69 1e-12
01_06_0271 - 28055367-28055402,28055503-28055622,28055710-280558... 66 1e-11
05_03_0481 + 14556223-14556762,14556848-14556928,14559532-145597... 53 1e-07
03_06_0658 - 35335639-35335731,35335814-35335871,35336213-353363... 40 7e-04
04_04_0214 - 23674270-23676858,23677574-23680843,23680941-236811... 39 0.001
08_01_0900 + 8867895-8868938,8869887-8870085,8871500-8871713,887... 38 0.003
06_03_0983 - 26559772-26559915,26560149-26560251,26560335-265605... 38 0.003
02_01_0577 + 4280590-4281225,4281749-4282102,4282214-4282412,428... 38 0.003
08_01_0214 - 1710317-1710443,1710839-1711047,1711161-1711420,171... 37 0.007
02_05_0403 - 28696043-28696153,28696245-28696347,28696443-286965... 36 0.009
04_03_0305 - 14125193-14125421,14125666-14127104 35 0.027
03_02_0732 - 10794173-10795069,10795301-10795891,10797032-10797268 33 0.083
08_02_0851 - 21866088-21866210,21866311-21866413,21866531-218667... 33 0.11
03_01_0369 - 2863159-2863491,2864149-2864214,2865045-2865140,286... 32 0.19
05_07_0241 + 28609700-28611649 31 0.25
01_06_0790 + 32019972-32020101,32020461-32020657,32020790-320209... 31 0.25
06_01_0081 + 646100-646346,646432-646848,647067-647170,648152-64... 31 0.34
03_02_0731 - 10786122-10787018,10787859-10788449,10788659-107887... 31 0.44
09_06_0236 - 21781508-21783043,21783307-21783504 29 1.0
03_01_0213 + 1685862-1686059,1686194-1687732 29 1.8
03_01_0241 - 1866625-1868082,1868892-1869080 28 2.4
03_01_0228 + 1802038-1803265,1804207-1804245,1804638-1804783,180... 28 2.4
01_06_1695 + 39251266-39252390,39252852-39252983,39253560-392537... 28 2.4
01_03_0181 + 13523172-13524641 28 2.4
09_03_0161 - 12921692-12921880,12922664-12922739,12923045-129231... 27 4.1
03_01_0240 - 1862699-1864186,1864245-1864442 27 4.1
10_08_1051 - 22562840-22562971,22563474-22563576,22563701-225637... 27 5.5
04_04_1635 - 34943881-34945233,34945321-34945524 27 5.5
02_01_0140 + 1014594-1016048 27 5.5
09_03_0147 + 12763526-12763815,12763938-12764067,12764185-127644... 27 7.2
05_05_0290 - 23879064-23880035 27 7.2
01_06_1694 + 39246262-39247320,39247464-39247590,39248638-392487... 27 7.2
11_01_0541 + 4275660-4275766,4275856-4275973,4276160-4276386,427... 26 9.6
07_03_1439 - 26556398-26556418,26556700-26557743 26 9.6
03_02_0842 + 11682332-11683802,11683858-11683940,11684751-116865... 26 9.6
02_04_0049 + 19238794-19239003,19239359-19239505,19239595-192397... 26 9.6
>11_01_0285 -
2115051-2115146,2115220-2115306,2115417-2115503,
2115724-2115809,2115889-2115992,2117447-2117533,
2117621-2117744,2118420-2118538,2118626-2118755,
2118902-2118990,2119122-2119210,2119985-2120078,
2120187-2120266,2120363-2120452,2121195-2121281,
2121381-2121425,2121847-2121923,2121997-2122102,
2122258-2122339,2122430-2122501,2122502-2122585,
2123007-2123084,2123155-2123224,2123737-2123851
Length = 725
Score = 118 bits (283), Expect = 2e-27
Identities = 60/133 (45%), Positives = 79/133 (59%), Gaps = 2/133 (1%)
Frame = +1
Query: 1 NCPEWIMTEQAAYCYSMVIVPLYDTLGANACAFIVNQTEMAVVICEDDKKANLL--LDQS 174
N PEWI+ + A YS V VPLYDTLG +A FIVN + + C + LL + Q
Sbjct: 177 NRPEWIIVDHACAAYSFVSVPLYDTLGPDAVQFIVNHATVEAIFCVPQTLSTLLSFITQM 236
Query: 175 PRCLRKLITIKEVSPSTFQRAKSRGVEILKFSDVEIQGAQKDHPFVPPKPENLCTICYTX 354
P C+R ++ I + + S GVEI+ +S + QG PF PPKPE++ TICYT
Sbjct: 237 P-CVRLIVVIGGDNANMPSTPTSTGVEIIIYSRLLNQGKMSSRPFRPPKPEDVATICYTS 295
Query: 355 GTTGMPKGVMLTH 393
GTTG PKGV+L+H
Sbjct: 296 GTTGTPKGVVLSH 308
>12_01_0288 -
2160981-2161076,2161150-2161236,2161333-2161419,
2161641-2161726,2161805-2161908,2162618-2162704,
2162790-2162913,2163058-2163176,2163268-2163397,
2163583-2163671,2163804-2163892,2164579-2164672,
2164778-2164857,2164952-2165041,2166307-2166393,
2166495-2166539,2166966-2167042,2167120-2167225,
2167383-2167464,2167553-2167624,2168106-2168183,
2168259-2168349,2168826-2168979
Length = 717
Score = 112 bits (270), Expect = 8e-26
Identities = 57/133 (42%), Positives = 77/133 (57%), Gaps = 2/133 (1%)
Frame = +1
Query: 1 NCPEWIMTEQAAYCYSMVIVPLYDTLGANACAFIVNQTEMAVVICEDDKKANLL--LDQS 174
N PEW + + A YS V VPLYDTLG +A FIVN + + C + LL + Q
Sbjct: 169 NRPEWTIVDHACAAYSYVSVPLYDTLGPDAVQFIVNHATVQAIFCVPQTLSTLLSFITQM 228
Query: 175 PRCLRKLITIKEVSPSTFQRAKSRGVEILKFSDVEIQGAQKDHPFVPPKPENLCTICYTX 354
P C+R ++ I + + + GVEI+ +S + QG F PPKPE++ TICYT
Sbjct: 229 P-CVRLIVVIGGDNANMPSTPTATGVEIITYSRLLSQGKMSSQSFRPPKPEDIATICYTS 287
Query: 355 GTTGMPKGVMLTH 393
GTTG PKGV+L+H
Sbjct: 288 GTTGTPKGVVLSH 300
>05_01_0243 -
1806770-1806832,1806942-1807061,1807275-1807457,
1807554-1807693,1807768-1808010,1808664-1808781,
1808902-1808977,1809054-1809120,1809201-1809288,
1809381-1809491,1809632-1809799,1809946-1810040,
1810123-1810162,1810242-1810318,1810607-1810655,
1810756-1810812,1810959-1811048,1811160-1811223,
1812085-1812245
Length = 669
Score = 100 bits (240), Expect = 4e-22
Identities = 53/135 (39%), Positives = 78/135 (57%), Gaps = 4/135 (2%)
Frame = +1
Query: 1 NCPEWIMTEQAAYCYSMVIVPLYDTLGANACAFIVNQTEMAVVICEDDKKANLLLD--QS 174
NCP+WI+ QA YS++ VPLYDTLGA A FI++ E+ V+ +D K +L +S
Sbjct: 115 NCPQWIVAMQACNGYSLICVPLYDTLGAGAVDFIIDHAEIDVIFVQDKKIKEILSANCKS 174
Query: 175 PRCLRKLITIKEVSPSTFQRAKSRGVEILKFSDVEIQGAQKDHPFVP--PKPENLCTICY 348
+ ++ L+ + A G+++ + D G K++P P PKP + CTI Y
Sbjct: 175 AKRVKGLVAFTSGTSEEITSADQIGMKLYSWKDFLKMG--KENPAQPCAPKPNDTCTIMY 232
Query: 349 TXGTTGMPKGVMLTH 393
T GT+G PKGVML+H
Sbjct: 233 TSGTSGEPKGVMLSH 247
>06_01_0414 +
2948868-2948998,2949136-2949202,2949442-2949531,
2950509-2950565,2950684-2950732,2950934-2951010,
2952776-2952815,2952909-2953003,2953174-2953341,
2953634-2953721,2954275-2954341,2954571-2954646,
2954759-2954876,2954988-2955233,2955296-2955471,
2956056-2956238,2956331-2956450,2956586-2956621
Length = 627
Score = 95.1 bits (226), Expect = 2e-20
Identities = 53/135 (39%), Positives = 77/135 (57%), Gaps = 4/135 (2%)
Frame = +1
Query: 1 NCPEWIMTEQAAYCYSMVIVPLYDTLGANACAFIVNQTEMAVVICEDDKKANLL--LDQS 174
NCPEWI++ +A + VPLYD+LGA A FIV E+ + E+ K A LL +
Sbjct: 106 NCPEWIISMEACNALGVSCVPLYDSLGAGAVEFIVCHAEIQIAFVEERKIAELLKTCHAT 165
Query: 175 PRCLRKLITIKEVSPSTFQRAKSRGVEILKFSDVEIQGAQKDHPFVPP--KPENLCTICY 348
+ L+ +I+ V+ + AK+ G+ I + + I G DH F P K ++CTI Y
Sbjct: 166 SKYLKTIISFGGVTNDQKEEAKNHGMSIFSWEEFLIMGG--DHHFDLPEKKKSDICTIMY 223
Query: 349 TXGTTGMPKGVMLTH 393
T GTTG PKGVM+++
Sbjct: 224 TSGTTGDPKGVMISN 238
>11_06_0086 +
19914234-19914382,19914590-19914653,19914793-19914882,
19915000-19915056,19915147-19915195,19915393-19915469,
19915686-19915725,19915813-19915907,19916007-19916171,
19916317-19916427,19916515-19916602,19916691-19916757,
19916822-19916939,19917022-19917139,19917398-19917643,
19917736-19917833,19917961-19918143,19918237-19918356,
19918515-19918565
Length = 661
Score = 92.7 bits (220), Expect = 1e-19
Identities = 46/134 (34%), Positives = 76/134 (56%), Gaps = 3/134 (2%)
Frame = +1
Query: 1 NCPEWIMTEQAAYCYSMVIVPLYDTLGANACAFIVNQTEMAVVICEDDKKANLLLDQSPR 180
NCPEW+M QA + VPLYDTLGANA FI++ E+++ + + K +L R
Sbjct: 111 NCPEWVMAMQACNSQGICYVPLYDTLGANAVEFIMDHAEISIAFVQ-ESKIQSVLSVVKR 169
Query: 181 C---LRKLITIKEVSPSTFQRAKSRGVEILKFSDVEIQGAQKDHPFVPPKPENLCTICYT 351
C ++ +++ +V+ + A+ GV + + G Q ++ + +++CTI YT
Sbjct: 170 CRAHIKAIVSFGDVTSELKREAEQLGVSCFSWEEFSSMGKQ-NYELPKKQKDDICTIMYT 228
Query: 352 XGTTGMPKGVMLTH 393
GTTG PKGV++T+
Sbjct: 229 SGTTGDPKGVIITN 242
>01_06_0120 +
26622285-26622433,26623156-26623219,26623310-26623399,
26623588-26623644,26623832-26623880,26624320-26624396,
26624918-26624957,26625037-26625131,26625525-26625689,
26625777-26625887,26625971-26626058,26626715-26626781,
26626955-26627063,26627155-26627272,26628345-26628590,
26628956-26629095,26629262-26629444,26629560-26629679,
26629932-26629967
Length = 667
Score = 86.6 bits (205), Expect = 6e-18
Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 2/133 (1%)
Frame = +1
Query: 1 NCPEWIMTEQAAYCYSMVIVPLYDTLGANACAFIVNQTEMAVVICEDDKKANLL--LDQS 174
NCPEWI+T +A + + VPLYDTLGA A FI+ E+ + E+ K + +S
Sbjct: 111 NCPEWIITMEACNAHGIYCVPLYDTLGAGAVEFILCHAEVEIAFTEEKKIEQIFKTFPKS 170
Query: 175 PRCLRKLITIKEVSPSTFQRAKSRGVEILKFSDVEIQGAQKDHPFVPPKPENLCTICYTX 354
L+ +++ +V+ + A G+EI + D + A ++ ++CTI YT
Sbjct: 171 AEFLKTIVSFGKVTQEQKENASKYGLEIYSW-DEFLSLADQEFDLPVKAKTDICTIMYTS 229
Query: 355 GTTGMPKGVMLTH 393
GTTG PKGV++++
Sbjct: 230 GTTGDPKGVLISN 242
>11_01_0439 +
3353516-3353962,3354403-3354483,3354675-3354947,
3355081-3355212,3355303-3355476,3355568-3355702,
3355746-3355797,3355954-3356093,3356574-3356705,
3356787-3356921,3356995-3357201,3357779-3357943
Length = 690
Score = 72.1 bits (169), Expect = 1e-13
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 4/132 (3%)
Frame = +1
Query: 10 EWIMTEQAAYCYSMVIVPLYDTLGANACAFIVNQTEMAVVICEDDKKANLLLDQSPRC-- 183
EW + QA + S+ +V +Y +LG A +N+TE+ VIC K+ LLD S +
Sbjct: 143 EWQIALQACFRQSITVVTIYSSLGEGALCHSLNETEVTTVIC-GRKELKKLLDISGQLDT 201
Query: 184 LRKLITIKE--VSPSTFQRAKSRGVEILKFSDVEIQGAQKDHPFVPPKPENLCTICYTXG 357
++ +I + E VS K + F +VE G + P P + I YT G
Sbjct: 202 VKHVIYVNEEGVSSEVSLAQKCTSWRVESFEEVERLGLETPVEAKLPLPSDTAVIMYTSG 261
Query: 358 TTGMPKGVMLTH 393
+TGMPKGVM++H
Sbjct: 262 STGMPKGVMMSH 273
>12_01_0441 +
3484003-3484374,3485071-3485151,3485242-3485514,
3485695-3485826,3485903-3486076,3486164-3486393,
3486562-3486679,3486717-3486743,3486948-3487079,
3487189-3487323,3487393-3487599,3487772-3487936
Length = 681
Score = 69.3 bits (162), Expect = 1e-12
Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 4/132 (3%)
Frame = +1
Query: 10 EWIMTEQAAYCYSMVIVPLYDTLGANACAFIVNQTEMAVVICEDDKKANLLLDQSPRC-- 183
EW + QA + ++ +V +Y +LG A +N+TE+ V+C K+ ++D S +
Sbjct: 118 EWQIALQACFRQNITVVTIYASLGEEALCHSLNETEVTTVVC-GQKELKKMIDISGQLDT 176
Query: 184 LRKLITIKE--VSPSTFQRAKSRGVEILKFSDVEIQGAQKDHPFVPPKPENLCTICYTXG 357
++++I I E +S KS I F DV G P P ++ I YT G
Sbjct: 177 VKRVIYINEEGISAEVSLAQKSTSWIIEPFEDVGRLGDTAPVDANMPLPSDVAVIMYTSG 236
Query: 358 TTGMPKGVMLTH 393
+TG+PKGVM+TH
Sbjct: 237 STGLPKGVMMTH 248
>01_06_0271 -
28055367-28055402,28055503-28055622,28055710-28055892,
28056006-28056145,28056347-28056595,28056706-28056823,
28056924-28056999,28057096-28057162,28057282-28057369,
28057506-28057616,28058127-28058221,28058305-28058344,
28058736-28058812,28058978-28059026,28059464-28059520,
28059624-28059713,28059833-28059896,28060076-28060245
Length = 609
Score = 65.7 bits (153), Expect = 1e-11
Identities = 32/110 (29%), Positives = 60/110 (54%), Gaps = 2/110 (1%)
Frame = +1
Query: 1 NCPEWIMTEQAAYCYSMVIVPLYDTLGANACAFIVNQTEMAVVICEDDKKANLL--LDQS 174
NCPEW+++ QA + + VPLYDTLGA A FI+ E+ + E+ K +L +
Sbjct: 118 NCPEWVISMQACNAHGIYCVPLYDTLGAGAVEFILCHAEVEIAFIEEKKIGEVLKTFPNA 177
Query: 175 PRCLRKLITIKEVSPSTFQRAKSRGVEILKFSDVEIQGAQKDHPFVPPKP 324
+ L+ +++ +V+P ++ + GV I + + +Q ++D ++ P
Sbjct: 178 TKYLKTIVSFGKVNPEQKEKVEQNGVSIYSWEEF-LQLLREDDVYISYLP 226
>05_03_0481 +
14556223-14556762,14556848-14556928,14559532-14559798,
14559933-14559992,14560811-14560942,14561026-14561199,
14562769-14562919,14563651-14563790,14565656-14565787,
14565866-14566000,14566098-14566304,14567376-14567540
Length = 727
Score = 52.8 bits (121), Expect = 1e-07
Identities = 29/123 (23%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
Frame = +1
Query: 10 EWIMTEQAAYCYSMVIVPLYDTLGANACAFIVNQTEMAVVICEDDKKANL-LLDQSPRCL 186
EWI+ Q + ++ +V +Y +LG +A +N+T+++ +IC+ + L + + +
Sbjct: 174 EWIIAAQGCFRQNLTVVTIYASLGEDALVHSLNETQVSTLICDSKQLKKLPAISSKLQSV 233
Query: 187 RKLITIKEVSPSTFQRAKSRGVEILKFSDVEIQGAQKDHPFVPPKPENLCTICYTXGTTG 366
+ +I I++ + + F +VE G P + I YT G+TG
Sbjct: 234 KHVIYIEDEPVEAEVLNQMKHWTTFSFGEVEELGKTSHTDARLPSSTDTAVIMYTSGSTG 293
Query: 367 MPK 375
+PK
Sbjct: 294 LPK 296
>03_06_0658 -
35335639-35335731,35335814-35335871,35336213-35336355,
35336624-35336703,35336916-35337075,35337531-35337668,
35338487-35338567,35338640-35338693,35339192-35339297,
35339615-35339682,35340076-35340225,35340401-35340519,
35341151-35341362,35342118-35342205,35342365-35342479,
35343083-35343274,35343809-35344018
Length = 688
Score = 39.9 bits (89), Expect = 7e-04
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +1
Query: 322 PENLCTICYTXGTTGMPKGVMLTH 393
P+++ T+ YT GT+G PKGVMLTH
Sbjct: 283 PDDVATLIYTSGTSGTPKGVMLTH 306
>04_04_0214 -
23674270-23676858,23677574-23680843,23680941-23681119,
23681200-23681559,23681645-23682086,23682199-23682332,
23682479-23682680
Length = 2391
Score = 39.1 bits (87), Expect = 0.001
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +1
Query: 307 FVPPKPENLCTICYTXGTTGMPKGVMLTH 393
F P+P +LC + +T G+TG KGVM+TH
Sbjct: 648 FTKPQPSDLCFLQFTSGSTGDAKGVMITH 676
>08_01_0900 +
8867895-8868938,8869887-8870085,8871500-8871713,
8871854-8871959,8872077-8872199
Length = 561
Score = 37.9 bits (84), Expect = 0.003
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = +1
Query: 322 PENLCTICYTXGTTGMPKGVMLTH 393
P+++ + Y+ GTTG+PKGVMLTH
Sbjct: 197 PDDVVALPYSSGTTGLPKGVMLTH 220
>06_03_0983 -
26559772-26559915,26560149-26560251,26560335-26560548,
26563352-26563550,26564509-26564862,26565430-26566086
Length = 556
Score = 37.9 bits (84), Expect = 0.003
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = +1
Query: 322 PENLCTICYTXGTTGMPKGVMLTH 393
P+++ + Y+ GTTG+PKGVMLTH
Sbjct: 186 PDDVVALPYSSGTTGLPKGVMLTH 209
>02_01_0577 +
4280590-4281225,4281749-4282102,4282214-4282412,
4284991-4285204,4285299-4285401,4285481-4285639
Length = 554
Score = 37.9 bits (84), Expect = 0.003
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = +1
Query: 322 PENLCTICYTXGTTGMPKGVMLTH 393
P+++ + Y+ GTTG+PKGVMLTH
Sbjct: 179 PDDVVALPYSSGTTGLPKGVMLTH 202
>08_01_0214 -
1710317-1710443,1710839-1711047,1711161-1711420,
1711442-1711534,1711745-1711872,1711958-1712151,
1712288-1712385,1712548-1712658,1712782-1712950,
1713109-1713181,1713311-1713507
Length = 552
Score = 36.7 bits (81), Expect = 0.007
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +1
Query: 322 PENLCTICYTXGTTGMPKGVMLTH 393
P ++ IC+T GTTG PKGV ++H
Sbjct: 173 PNDVALICFTSGTTGRPKGVAISH 196
>02_05_0403 -
28696043-28696153,28696245-28696347,28696443-28696510,
28696582-28696727,28698038-28699124
Length = 504
Score = 36.3 bits (80), Expect = 0.009
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +1
Query: 259 LKFSDVEIQGAQKDHPFVPPKPENLCTICYTXGTTGMPKGVMLTH 393
L F D+ + P V P++ + ++ GTTG+PKGV+LTH
Sbjct: 189 LPFWDLIADADEGSVPEVAISPDDPVALPFSSGTTGLPKGVVLTH 233
>04_03_0305 - 14125193-14125421,14125666-14127104
Length = 555
Score = 34.7 bits (76), Expect = 0.027
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +1
Query: 304 PFVPPKPENLCTICYTXGTTGMPKGVMLTH 393
P + +LC + Y+ GTTG+ KGVML+H
Sbjct: 185 PVDAAQQSDLCALPYSSGTTGVSKGVMLSH 214
>03_02_0732 - 10794173-10795069,10795301-10795891,10797032-10797268
Length = 574
Score = 33.1 bits (72), Expect = 0.083
Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 11/117 (9%)
Frame = +1
Query: 76 LGANACAFIVNQTEMAVVICEDD------KKANLLLDQSPRCLRK--LITIKEVS--PST 225
L A AF+++ + VV+ + + + +L ++ R LI I + + P
Sbjct: 111 LNAETIAFLLDHSVAEVVMVDQEFFTLAEESLKILAEKKKWSFRPPILIVIGDPTCDPKP 170
Query: 226 FQRAKSRGVEILKFSDVEIQGAQKDHPFVPPKPE-NLCTICYTXGTTGMPKGVMLTH 393
Q A RG +++ + ++ + + PPK E + YT GTT PKGV+L H
Sbjct: 171 LQYALGRGA--IEYEEF-LKTGDPEFAWKPPKDEWQSIALGYTSGTTSSPKGVVLHH 224
>08_02_0851 -
21866088-21866210,21866311-21866413,21866531-21866744,
21866877-21867075,21867171-21868151
Length = 539
Score = 32.7 bits (71), Expect = 0.11
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +1
Query: 346 YTXGTTGMPKGVMLTH 393
Y+ GTTG+PKGVML+H
Sbjct: 184 YSSGTTGLPKGVMLSH 199
>03_01_0369 -
2863159-2863491,2864149-2864214,2865045-2865140,
2865530-2865632,2865771-2865838,2866570-2866712,
2867050-2867242,2867602-2867640,2867742-2867807,
2868617-2869651
Length = 713
Score = 31.9 bits (69), Expect = 0.19
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 292 QKDHPFVPPKPENLCTICYTXGTTGMPKGVMLTH 393
+ D+ P K + + Y+ GTTG KGV+LTH
Sbjct: 186 EADYRRPPIKQSDTAALLYSSGTTGDSKGVILTH 219
>05_07_0241 + 28609700-28611649
Length = 649
Score = 31.5 bits (68), Expect = 0.25
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1
Query: 286 GAQKDHPFVPPKPENLCTICYTXGTTGMPKGVMLT 390
GA PFV +PE+ I YT G TG K V++T
Sbjct: 181 GAAPVTPFVGGEPEDAYLIQYTSGATGAQKPVVIT 215
>01_06_0790 +
32019972-32020101,32020461-32020657,32020790-32020993,
32021444-32021645,32021798-32021886,32022567-32022662,
32022710-32022814,32023516-32023556,32023685-32023777,
32023853-32023970,32024488-32024578,32024693-32024766,
32025008-32025187,32025643-32025681
Length = 552
Score = 31.5 bits (68), Expect = 0.25
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +1
Query: 340 ICYTXGTTGMPKGVMLTH 393
I YT GTTG PKGV+ TH
Sbjct: 251 ILYTSGTTGKPKGVVHTH 268
>06_01_0081 +
646100-646346,646432-646848,647067-647170,648152-648352,
649088-649798,649944-650674,650942-651017,651096-651182,
651429-651517,651917-651973,652402-652510,652590-652649,
652835-652919,653178-653242,653694-653753,653869-653913,
654697-654800,654877-655099
Length = 1156
Score = 31.1 bits (67), Expect = 0.34
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 319 KPENLCTICYTXGTTGMPKGV 381
KP C + +T G+TG PKGV
Sbjct: 196 KPREFCYVMFTSGSTGKPKGV 216
>03_02_0731 -
10786122-10787018,10787859-10788449,10788659-10788740,
10789914-10790107
Length = 587
Score = 30.7 bits (66), Expect = 0.44
Identities = 28/117 (23%), Positives = 55/117 (47%), Gaps = 11/117 (9%)
Frame = +1
Query: 76 LGANACAFIVNQTEMAVVICEDD------KKANLLLDQSPRCLRK--LITIKEVS--PST 225
L A AF++ + VV+ + + ++ +Q ++ LI I + + P +
Sbjct: 124 LNAPTVAFLLEHSSAEVVMVDQEFFSLAEDSLRIIAEQKKGAFKQPLLIVIGDQTCDPVS 183
Query: 226 FQRAKSRGVEILKFSDVEIQGAQKDHPFVPPKPE-NLCTICYTXGTTGMPKGVMLTH 393
+ A S+G +++ + ++ + + PP+ E + YT GTT PKGV+L H
Sbjct: 184 LKSALSKGA--IEYEEF-LETGDPEFAWKPPQDEWKSIALGYTSGTTSNPKGVVLHH 237
>09_06_0236 - 21781508-21783043,21783307-21783504
Length = 577
Score = 29.5 bits (63), Expect = 1.0
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 259 LKFSDVEIQGAQKDHPFVPPKPE-NLCTICYTXGTTGMPKGVMLTH 393
L++ + +G +P P + E + + YT GTT PKGV+ +H
Sbjct: 167 LEYEQLVARGDPARYPPRPVEDEWDAVALNYTSGTTSAPKGVVYSH 212
>03_01_0213 + 1685862-1686059,1686194-1687732
Length = 578
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 337 TICYTXGTTGMPKGVMLTH 393
T+ YT GTT PKGV+ +H
Sbjct: 185 TLNYTSGTTSAPKGVVYSH 203
>03_01_0241 - 1866625-1868082,1868892-1869080
Length = 548
Score = 28.3 bits (60), Expect = 2.4
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1
Query: 337 TICYTXGTTGMPKGVMLTH 393
T+ YT GTT PKGV+ H
Sbjct: 183 TLNYTSGTTSRPKGVVYNH 201
>03_01_0228 +
1802038-1803265,1804207-1804245,1804638-1804783,
1804891-1804958,1805045-1805147,1805287-1805400
Length = 565
Score = 28.3 bits (60), Expect = 2.4
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 337 TICYTXGTTGMPKGVMLTH 393
T+ Y+ GTTG KGV+ TH
Sbjct: 203 TLLYSSGTTGPSKGVVATH 221
>01_06_1695 +
39251266-39252390,39252852-39252983,39253560-39253748,
39253887-39253954,39254080-39254182,39254387-39254509
Length = 579
Score = 28.3 bits (60), Expect = 2.4
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +1
Query: 247 GVEIL-KFSDVEIQGAQKDHPFVPPKPENLCTICYTXGTTGMPKGVMLTH 393
G E+ + + G P V K + + Y+ GTTG K V +TH
Sbjct: 183 GSEVFDRLASASAAGGWAAPPAVAMKQPSTAALLYSSGTTGRVKAVAITH 232
>01_03_0181 + 13523172-13524641
Length = 489
Score = 28.3 bits (60), Expect = 2.4
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +1
Query: 286 GAQKDHPFVPPKPENL-CTICYTXGTTGMPKGVMLTH 393
G+ D P EN + YT GTT PKGV+ +H
Sbjct: 79 GSSPDFAIRWPADENEPIALNYTSGTTSRPKGVIYSH 115
>09_03_0161 -
12921692-12921880,12922664-12922739,12923045-12923157,
12923250-12923477
Length = 201
Score = 27.5 bits (58), Expect = 4.1
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2
Query: 298 PFELPVFRRQRTSKSQHHGSWRVE 227
P +P F Q TSK + H WR+E
Sbjct: 67 PDPIPEFAAQETSKFKEHMMWRLE 90
>03_01_0240 - 1862699-1864186,1864245-1864442
Length = 561
Score = 27.5 bits (58), Expect = 4.1
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 313 PPKPENLCTICYTXGTTGMPKGVMLTH 393
P + ++ YT GTT PKGV+ +H
Sbjct: 188 PADERDPISLNYTSGTTSRPKGVIYSH 214
>10_08_1051 -
22562840-22562971,22563474-22563576,22563701-22563768,
22563896-22564053,22564706-22564895,22565162-22566205
Length = 564
Score = 27.1 bits (57), Expect = 5.5
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +1
Query: 325 ENLCTICYTXGTTGMPKGVMLTH 393
++ + Y+ GT+G KGV++TH
Sbjct: 199 DDAAAVLYSSGTSGRSKGVVVTH 221
>04_04_1635 - 34943881-34945233,34945321-34945524
Length = 518
Score = 27.1 bits (57), Expect = 5.5
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 322 PENLCTICYTXGTTGMPKGVMLT 390
P ++ +T GTT PKGV LT
Sbjct: 160 PSDVALFLHTSGTTSRPKGVPLT 182
>02_01_0140 + 1014594-1016048
Length = 484
Score = 27.1 bits (57), Expect = 5.5
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 346 YTXGTTGMPKGVMLTH 393
YT GTT PKGV+ +H
Sbjct: 110 YTSGTTSRPKGVIYSH 125
>09_03_0147 +
12763526-12763815,12763938-12764067,12764185-12764435,
12764546-12764750,12764878-12764918,12765006-12765131,
12765429-12765502,12765671-12765891,12766251-12766345,
12766463-12766679,12766781-12766906,12766988-12767086,
12767171-12767380,12767496-12767606
Length = 731
Score = 26.6 bits (56), Expect = 7.2
Identities = 29/121 (23%), Positives = 50/121 (41%), Gaps = 7/121 (5%)
Frame = +1
Query: 52 VIVPLYDTLGANACAFIVNQTEMAVVICED----DKKANLLLDQSPRCLRKLITIKEVSP 219
V+V + D+ A A + + +E + +D D K L + + + V
Sbjct: 264 VVVSIADSFAAPAISMRLKISEAKAIFTQDYILRDDKELPLYSRVVEAKAPMTIVIPVRG 323
Query: 220 STFQRAKSRGVEILKFSD--VEIQGAQKDHPFVPPKPENLCT-ICYTXGTTGMPKGVMLT 390
ST K + L + D ++ A+ D+ +P T I ++ GTTG PK + T
Sbjct: 324 ST--PIKGLRADDLSWEDFLAKVNHAKADNYTAVEQPAYAFTNILFSSGTTGEPKAIPWT 381
Query: 391 H 393
H
Sbjct: 382 H 382
>05_05_0290 - 23879064-23880035
Length = 323
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 85 SLLAYHTTEL*PSNNNTPPVRS*SIQ 8
SLL H E PS N TPP + +++
Sbjct: 161 SLLLQHLAESDPSRNGTPPAKKEAVE 186
>01_06_1694 +
39246262-39247320,39247464-39247590,39248638-39248783,
39248898-39248965,39249055-39249157,39249616-39249741
Length = 542
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 310 VPPKPENLCTICYTXGTTGMPKGVMLTH 393
V K + + Y+ GTTG K V +TH
Sbjct: 191 VAVKQSDTAAVLYSSGTTGRVKAVAITH 218
>11_01_0541 +
4275660-4275766,4275856-4275973,4276160-4276386,
4276505-4276729,4276902-4277052,4277139-4277345,
4277442-4277520,4277605-4277723
Length = 410
Score = 26.2 bits (55), Expect = 9.6
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +1
Query: 31 AAYCYSMVIVPLYDTLGANACAFIVNQTEM--AVVICEDDKKANLLLDQSPRCLRKL 195
AA Y + + TL + C F+ TE A+ +C K + +D+ +C R L
Sbjct: 266 AAQPYQATLSVVKSTLNSE-CKFLTEVTEKDRALTVCWKGKDKIVTIDEVKKCFRSL 321
>07_03_1439 - 26556398-26556418,26556700-26557743
Length = 354
Score = 26.2 bits (55), Expect = 9.6
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 325 ENLCTICYTXGTTGMPKGVMLTH 393
++ + Y+ GTTG KGV+ TH
Sbjct: 186 DDAALLFYSSGTTGRSKGVVSTH 208
>03_02_0842 + 11682332-11683802,11683858-11683940,11684751-11686553,
11687783-11688633,11689230-11689299,11689597-11689641
Length = 1440
Score = 26.2 bits (55), Expect = 9.6
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +1
Query: 115 EMAVVICEDDKKANLLLDQSPRCLRKLI-TIKEVSPSTFQRAKSRGVEILK--FSDVE 279
E ED+ L+D +P RKL+ T E S + +E L+ +S+VE
Sbjct: 1338 EANATFIEDEAMRKRLMDTNPNSFRKLVQTFLEASGRGYWETSEENLEKLRELYSEVE 1395
>02_04_0049 +
19238794-19239003,19239359-19239505,19239595-19239750,
19239870-19239992,19240073-19240241,19240700-19240782,
19240917-19241018,19241104-19241192,19241317-19241407,
19241734-19241847,19242371-19242447,19242534-19242612,
19242710-19242778,19243022-19243197,19243309-19243365,
19243460-19243550,19243644-19243742,19243878-19244063
Length = 705
Score = 26.2 bits (55), Expect = 9.6
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 340 ICYTXGTTGMPKGVMLT 390
+ YT G+TG PKGV+ T
Sbjct: 319 LLYTSGSTGKPKGVLHT 335
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,669,497
Number of Sequences: 37544
Number of extensions: 196301
Number of successful extensions: 499
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 490
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 684860244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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