Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0059
         (609 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.0  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    22   3.5  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   6.1  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = -2

Query: 236 LFICNICIIGTFSFLFTNVVFYCLLFTKVFLSLHYF 129
           L  C   II T   LF   ++Y      + L ++YF
Sbjct: 266 LLFCCAFIIFTMHLLFLLCIYYFYCALIILLCIYYF 301


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -3

Query: 130 LSQQVMGIKHNISECNKCMYNQRFI 56
           L Q V  I+H +S+ N+C+   R +
Sbjct: 120 LQQLVDNIEHKLSDPNQCVICHRVL 144


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 5/20 (25%), Positives = 11/20 (55%)
 Frame = +3

Query: 18  FIVIVKTLEYIKCINLWLYI 77
           F+++        C+N W+Y+
Sbjct: 301 FVILTLLYSLNSCVNPWIYL 320


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,394
Number of Sequences: 336
Number of extensions: 2091
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)