Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0055
         (655 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    25   0.41 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   2.9  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.9  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 17/60 (28%), Positives = 28/60 (46%)
 Frame = +1

Query: 127 RSFQDEVLADGKVVIDLIDAIKPGSINYDLVLPGGNEEENLANAKYAISMARRCGGRVYA 306
           + F++++ A     + L D  K   INY L+ P   E        YA+++A    GR+ A
Sbjct: 105 KRFRNQIEALVPRKLRLADGGKTLEINYKLIDPDLKELNLDTKESYALTVAETADGRLNA 164


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 7/21 (33%), Positives = 9/21 (42%)
 Frame = -3

Query: 566 FPTLVGCFIHLGKTAFDILNC 504
           FP ++GC I      F    C
Sbjct: 255 FPIIIGCLIQFNTIVFSFCYC 275


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = -2

Query: 177  QVNNDLPIGQYFVL 136
            QV+N++ +GQ FVL
Sbjct: 1538 QVSNNVKLGQNFVL 1551


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,146
Number of Sequences: 336
Number of extensions: 3004
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)