Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0054
(747 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0523 - 18518158-18518442,18518786-18518899,18518994-185192... 116 2e-26
04_04_1332 + 32718584-32718706,32718892-32718960,32719069-327191... 99 4e-21
03_01_0096 + 763850-764027,764873-765189,765262-765433,765513-76... 33 0.24
03_02_0445 - 8551912-8552047,8552729-8552896,8553785-8554068,855... 30 1.7
06_02_0162 + 12466027-12466354,12466894-12467546 30 2.2
12_02_0306 + 17307166-17309091 29 3.9
10_08_0829 - 20871810-20872011,20873226-20873359,20873480-208773... 29 3.9
04_01_0601 + 7918220-7918559,7919082-7919158 29 3.9
01_07_0131 + 41292800-41293400,41293522-41293649,41293759-412940... 29 3.9
10_07_0129 - 13207047-13207199,13207314-13207427 28 6.9
06_01_1195 + 10280864-10280979,10281024-10281115,10281211-102821... 28 6.9
03_01_0049 + 418957-419040,419599-419796,419918-420040,420172-42... 28 6.9
05_03_0384 - 13361999-13362120,13362241-13362252,13362921-133629... 28 9.1
05_03_0383 - 13352924-13353045,13353166-13353177,13353844-133539... 28 9.1
04_01_0598 - 7866098-7866349,7866382-7866486,7866969-7867238 28 9.1
>10_08_0523 -
18518158-18518442,18518786-18518899,18518994-18519219,
18519364-18519470,18519809-18519964,18520100-18520210
Length = 332
Score = 116 bits (280), Expect = 2e-26
Identities = 72/185 (38%), Positives = 95/185 (51%), Gaps = 4/185 (2%)
Frame = +1
Query: 1 IQNFKILQAGFKKMGVDKIVPIDKLVKGRFQDNFEFLQWFKKFFDANYGGA--AYDAVAQ 174
IQN+K+LQ F K+ + K + ++KL KGR DN EF+QW K++ D+ GG +Y+A +
Sbjct: 72 IQNYKVLQDVFNKLKITKHIEVNKLTKGRPLDNLEFMQWMKRYCDSVNGGFMNSYNASER 131
Query: 175 REGLPMGHGGSXXXXXXXXXXXXXXXXXXXXXXQTIG--KANTTVRSPPVNLSRISQSAK 348
RE G + + G KAN + P + S A
Sbjct: 132 RESSKGGKETNRRTSVPSQAPAKSSSATHKAQASSHGAKKANGHAPNAPPSRSAKPSPAN 191
Query: 349 GDSKVVDELNHQINELKATVDGLEKERDFYFGKLRDIEVICQEMEEQHNAPIVQKILDIL 528
DE QI ELK VD LEKERDFYF KLRD+E++CQ E +H PIV I +L
Sbjct: 192 SAGPAYDE---QITELKLLVDSLEKERDFYFSKLRDVEILCQSPEVEH-LPIVNAIHKVL 247
Query: 529 YATED 543
YA ED
Sbjct: 248 YAAED 252
>04_04_1332 +
32718584-32718706,32718892-32718960,32719069-32719155,
32719865-32719971,32720066-32720187,32720462-32720535,
32720833-32720946,32721100-32721213
Length = 269
Score = 98.7 bits (235), Expect = 4e-21
Identities = 65/188 (34%), Positives = 94/188 (50%), Gaps = 1/188 (0%)
Frame = +1
Query: 1 IQNFKILQAGFKKMGVDKIVPIDKLVKGRFQDNFEFLQWFKKFFDANYGGAAYDAVAQRE 180
IQN+KILQ F K+ + K + ++KLVKGR DN EFLQW K++ D+ GG + E
Sbjct: 76 IQNYKILQDVFNKLRLSKNIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVE 135
Query: 181 GLPMGHGGSXXXXXXXXXXXXXXXXXXXXXXQTIGKANTTVRSPPVNLSRISQSAKGDSK 360
G + AN+ P V + S + +
Sbjct: 136 RRSKG--------CKERSLKGSNKSSKSLQANRLSSANSADGGPCVGKVNVI-SEEHYIE 186
Query: 361 VVDELNHQINELKATVDGLEKERDFYFGKLRDIEVICQEMEEQHNAPIVQKILDILYATE 540
+ +L+ +I LK ++D EKERDFYF KLRDIE++CQ E +H P+ + + ILYA +
Sbjct: 187 QIQQLSEKIAGLKISMDSAEKERDFYFSKLRDIEILCQRPELEH-LPMTKAVQKILYAAD 245
Query: 541 DGFAP-PE 561
+P PE
Sbjct: 246 ARDSPLPE 253
>03_01_0096 +
763850-764027,764873-765189,765262-765433,765513-765586,
765658-765835,765917-766026,766122-766221,766305-766391,
766505-766681,766847-767120,767201-767362,767450-767665,
767744-767781,768044-768102,768214-768339,768415-768540,
768642-768695,768789-768851,768924-768986,769079-769141,
769232-769732
Length = 1045
Score = 33.1 bits (72), Expect = 0.24
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Frame = +1
Query: 274 QTIGKANTTVRSPPVNLSRISQSAKGDSKVVDELNHQINELKATVDGL-------EKERD 432
Q I + ++R N + AKG + L ++ EL++ +D EK+++
Sbjct: 720 QDIRLKDDSLRKLEDNCQNLENKAKGKEQFYKNLQEKVKELESQLDSKMHSQITSEKQQN 779
Query: 433 FYFGKLRDIEVICQEMEEQ 489
FGKL++ E +C ++++
Sbjct: 780 ELFGKLKEKEEMCTTLQQK 798
>03_02_0445 -
8551912-8552047,8552729-8552896,8553785-8554068,
8554143-8555386,8556901-8556967,8557059-8557150,
8557269-8557480,8558541-8558623,8559092-8559122,
8559770-8559951,8560557-8560616,8561092-8561289,
8561485-8561539,8562740-8562855,8563012-8563176,
8563310-8563483,8564134-8564333,8564778-8564882,
8565063-8565126,8566452-8566718
Length = 1300
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -2
Query: 206 EPPCPMGRPSRCATASYAAP-P*LASKNFLNHCKNSKLSWKRP 81
+P P PS + + A P P A N L C SKLSW P
Sbjct: 6 DPEAPTPTPSPSPSPAKATPSPASADGNRLRRCVQSKLSWGPP 48
>06_02_0162 + 12466027-12466354,12466894-12467546
Length = 326
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +1
Query: 352 DSKVVDELNHQINELKATVDGLEKERDFYFGKLRDI 459
D ++D H I+EL +D E E +Y KLRDI
Sbjct: 113 DRNIIDNRRHSISELMEKLDH-ESEIKYYEDKLRDI 147
>12_02_0306 + 17307166-17309091
Length = 641
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 279 GLGSSCDFGDRGDGFLSGSGPRGG 208
G G C GDG L G G RGG
Sbjct: 68 GAGVGCSLTGGGDGILCGGGARGG 91
>10_08_0829 -
20871810-20872011,20873226-20873359,20873480-20877313,
20878057-20878177,20878414-20878451,20879096-20879218,
20879308-20879505,20880270-20880356
Length = 1578
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/37 (32%), Positives = 24/37 (64%)
Frame = +1
Query: 415 LEKERDFYFGKLRDIEVICQEMEEQHNAPIVQKILDI 525
LEKE DF K++++E C E+ ++ N ++ K+ ++
Sbjct: 529 LEKENDFLKVKIQELEKDCSELTDE-NLELIYKLKEV 564
>04_01_0601 + 7918220-7918559,7919082-7919158
Length = 138
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -1
Query: 312 WRSDCCISFPDGLGSSCDFGDRGDGFLSGSGPRGGRAPVPHG 187
WR + +G G D GD GDG +G GGR V G
Sbjct: 70 WRGGGEVRAVEGEGEGEDGGDGGDGEQAGGESAGGRRVVGGG 111
>01_07_0131 +
41292800-41293400,41293522-41293649,41293759-41294019,
41294154-41294416,41294507-41294831
Length = 525
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -1
Query: 240 GFLSGSGPRGGRAPVPHGQTFSLRHCVICRTSIVGVKEFLEP 115
GFLS + G V H + + C + VG+K++L P
Sbjct: 437 GFLSSAPSSSGHGSVEHAMNLNNKIVDFCEKNGVGMKQYLAP 478
>10_07_0129 - 13207047-13207199,13207314-13207427
Length = 88
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1
Query: 286 KANTTVRSPPVNLSR-ISQSAKGDSKVVDELNHQINELKATVDGLEKERDFYFGKLR 453
+ T RSP L + + K + VD+L+ +++EL AT+D + D LR
Sbjct: 32 RRGATSRSPATKLLKEMCSYIKSLHREVDDLSERLSELMATMDSNSPQADIIRSLLR 88
>06_01_1195 +
10280864-10280979,10281024-10281115,10281211-10282156,
10282378-10283075,10283140-10284068
Length = 926
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -1
Query: 336 TNP*QINWWRSDCCISFPDGLGS 268
TNP + WWRS +S P G+GS
Sbjct: 620 TNPRR--WWRSSARVSVPKGIGS 640
>03_01_0049 +
418957-419040,419599-419796,419918-420040,420172-420209,
420334-420502,421115-424273,424367-424485,424915-425116
Length = 1363
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Frame = +1
Query: 367 DELNHQINELKATVDG----LEKERDFYFGKLRDIEVICQEMEEQHNAPIVQKILDILYA 534
++LNH +N D LEKE + K++++E C E+ ++ N ++ K+ ++ A
Sbjct: 488 EKLNHVLNIENLGSDAVYLELEKENELLRVKIQELEKDCSELTDE-NLELIYKLKEVGGA 546
Query: 535 TE 540
T+
Sbjct: 547 TK 548
>05_03_0384 -
13361999-13362120,13362241-13362252,13362921-13362981,
13363049-13363202,13364653-13364788,13365020-13365290,
13365654-13365962
Length = 354
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = -1
Query: 147 SIVGVKEFLEP-LQKLKIILETTLHQFVNGYYLVHTHLFKTSL 22
S++G + P + +LK+ ++ TLH+ + LVH LF+ ++
Sbjct: 151 SLIGTMSGIIPYMNQLKVFVDVTLHRMMLMKLLVHHDLFELAV 193
>05_03_0383 -
13352924-13353045,13353166-13353177,13353844-13353904,
13353972-13354125,13355576-13355711,13355943-13356138
Length = 226
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = -1
Query: 147 SIVGVKEFLEP-LQKLKIILETTLHQFVNGYYLVHTHLFKTSL 22
S++G + P + +LK+ ++ TLH+ + LVH LF+ ++
Sbjct: 23 SLIGTMSGIIPYMNQLKVFVDVTLHRMMLMKLLVHHDLFELAV 65
>04_01_0598 - 7866098-7866349,7866382-7866486,7866969-7867238
Length = 208
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -1
Query: 312 WRSDCCISFPDGLGSSCDFGDRGDGFLSGSGPRGGR 205
WR + +G G D GD GDG +G GGR
Sbjct: 53 WRGGGEVRAVEGEGEGEDGGDGGDGEQAGGESAGGR 88
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,355,659
Number of Sequences: 37544
Number of extensions: 411860
Number of successful extensions: 1310
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1305
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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