Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0044
         (704 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                25   0.92 
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    22   4.9  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   4.9  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    22   6.5  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    22   6.5  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   6.5  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    22   6.5  
AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.            21   8.6  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 24.6 bits (51), Expect = 0.92
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 372 IVRTPGGRLVYQYVKKPKKI 313
           + +  G RLVYQ+V  PK I
Sbjct: 527 LAKVDGQRLVYQFVDVPKDI 546


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +2

Query: 53  YLNLSPKIHFVAFFAD 100
           Y  + P IHF   FAD
Sbjct: 454 YFFICPSIHFAQLFAD 469


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +2

Query: 53  YLNLSPKIHFVAFFAD 100
           Y  + P IHF   FAD
Sbjct: 454 YFFICPSIHFAQLFAD 469


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = -3

Query: 654 VHLRHRYRQDEQTEALLIDKGHYKH 580
           VH+ H YRQ +         GH  H
Sbjct: 21  VHVYHPYRQPDGMNQCQAVNGHCSH 45


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = -3

Query: 654 VHLRHRYRQDEQTEALLIDKGHYKH 580
           VH+ H YRQ +         GH  H
Sbjct: 21  VHVYHPYRQPDGMNQCQAVNGHCSH 45


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 325 LFDILINQAATRCPY 369
           LFD+  N++  +CPY
Sbjct: 550 LFDLDYNESEEQCPY 564


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -1

Query: 602 LIKDITNMSGTVILKLISDVIVVLGNEAIMCFV 504
           LI D   +   +I+KL+  +I+      IMC +
Sbjct: 263 LIVDFFMILNEIIMKLVGIIIMWYSPFGIMCLI 295


>AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.
          Length = 50

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +2

Query: 530 LRPRSHHLLVLISLYHSC 583
           ++P+ H+  +  S+YH C
Sbjct: 29  IKPKDHNGSIYWSMYHLC 46


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,707
Number of Sequences: 438
Number of extensions: 3863
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21683070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)