Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0036
(682 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_1221 - 27130321-27130491,27130616-27130664,27131120-271311... 207 5e-54
07_03_1371 - 26100553-26101767 207 5e-54
03_06_0127 - 31872840-31872912,31873021-31873115,31873199-318732... 207 7e-54
08_02_0774 - 21047696-21048889 204 7e-53
01_06_1220 + 35493575-35494765 202 2e-52
01_06_0072 + 26184592-26184828,26184934-26185107,26185591-261857... 202 2e-52
05_07_0204 - 28397597-28397737,28398225-28398342,28399215-283993... 201 5e-52
02_01_0042 + 295608-296222,298479-298925 52 3e-07
01_05_0564 + 23312419-23312987,23314652-23314751,23314832-233150... 33 0.16
08_02_1600 + 28133818-28133900,28134240-28134345,28135169-281352... 33 0.21
04_03_0684 - 18670697-18670933,18671003-18671102,18671214-186712... 33 0.21
04_04_0587 + 26410808-26411338 31 1.1
06_03_0019 + 15506702-15506896,15507741-15507875,15508264-155085... 30 1.5
10_06_0120 - 10979458-10979665,10979909-10980585,10981315-109815... 29 2.6
05_04_0057 + 17543016-17543312 29 2.6
05_03_0485 + 14608663-14608989,14609265-14609535,14609720-146098... 29 2.6
10_03_0046 + 7357777-7357992 29 3.4
07_03_0730 + 21030123-21030338 29 3.4
04_01_0527 - 6913266-6913802 29 3.4
01_06_1064 + 34237919-34238155 29 3.4
08_02_1015 - 23597445-23597628,23597654-23597877 29 4.5
08_02_0114 + 12754155-12754370,12754792-12755340,12755410-127555... 28 6.0
06_03_1473 - 30382528-30382731,30382814-30382930,30383048-303831... 28 6.0
06_01_1114 - 9179614-9180167,9180223-9180544,9181524-9181820,918... 28 7.9
05_06_0098 + 25560158-25560925 28 7.9
04_04_0928 + 29472658-29472772,29473198-29473304,29473441-29473497 28 7.9
03_02_0568 + 9514715-9514944,9515174-9515300,9515529-9515684,951... 28 7.9
02_04_0005 - 18843061-18843201,18843309-18843440,18844457-188453... 28 7.9
02_02_0442 - 10318576-10319109 28 7.9
01_01_0772 - 5999333-5999881,6001105-6001315,6001791-6001858 28 7.9
>12_02_1221 -
27130321-27130491,27130616-27130664,27131120-27131188,
27131845-27131939,27132032-27132121,27132885-27132968,
27133122-27133211,27133310-27133624,27134184-27134399,
27134736-27134774,27135337-27135408
Length = 429
Score = 207 bits (506), Expect = 5e-54
Identities = 105/165 (63%), Positives = 121/165 (73%)
Frame = +2
Query: 152 FKXXXXXXXXXIGQPLALLLKQNPLVTRLALYDIAPVTPGVAADLSHMNTPAKVSGHKGP 331
FK IGQPLALL+K NPLV+ L LYD+ TPGV AD+SHMNT A V G G
Sbjct: 58 FKVAILGASGGIGQPLALLMKMNPLVSVLHLYDVVN-TPGVTADISHMNTGAVVRGFLGQ 116
Query: 332 EELSAAIKDADVVVIPAGVPRKPGMTRDDLFNTNASIVRDIALSIAQNAPKAIVAIITNP 511
+L A+ D+V+IPAGVPRKPGMTRDDLFN NA IVR + IA+ P AIV +I+NP
Sbjct: 117 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAIVNVISNP 176
Query: 512 VNSTVPIASEVLKKAGVYDPNRVLGVTTLDVVRAATFVGEINGVD 646
VNSTVPIA+EV KKAG YDP R+LGVTTLDVVRA TFV E+ G+D
Sbjct: 177 VNSTVPIAAEVFKKAGTYDPKRLLGVTTLDVVRANTFVAEVLGLD 221
>07_03_1371 - 26100553-26101767
Length = 404
Score = 207 bits (506), Expect = 5e-54
Identities = 101/153 (66%), Positives = 122/153 (79%)
Frame = +2
Query: 185 IGQPLALLLKQNPLVTRLALYDIAPVTPGVAADLSHMNTPAKVSGHKGPEELSAAIKDAD 364
IGQPL+LL+K +PLV+ L LYDIA V GV ADL H NTPAKV+G G EEL+ + D
Sbjct: 89 IGQPLSLLVKMSPLVSALHLYDIANVD-GVTADLGHCNTPAKVAGFTGKEELAGCLAGVD 147
Query: 365 VVVIPAGVPRKPGMTRDDLFNTNASIVRDIALSIAQNAPKAIVAIITNPVNSTVPIASEV 544
VVVIPAGVPRKPGMTRDDLF NA IVR++ ++A +AP A+V +I+NPVNSTVPIA+EV
Sbjct: 148 VVVIPAGVPRKPGMTRDDLFGINAGIVRELVEAVADHAPAALVHVISNPVNSTVPIAAEV 207
Query: 545 LKKAGVYDPNRVLGVTTLDVVRAATFVGEINGV 643
LK+ GVYDP ++ GVTTLDVVRA TFV E+ G+
Sbjct: 208 LKRKGVYDPRKLFGVTTLDVVRANTFVAEMKGL 240
>03_06_0127 -
31872840-31872912,31873021-31873115,31873199-31873288,
31873364-31873399,31874039-31874122,31874223-31874312,
31874426-31874740,31875674-31875883,31875965-31876036
Length = 354
Score = 207 bits (505), Expect = 7e-54
Identities = 102/165 (61%), Positives = 122/165 (73%)
Frame = +2
Query: 152 FKXXXXXXXXXIGQPLALLLKQNPLVTRLALYDIAPVTPGVAADLSHMNTPAKVSGHKGP 331
FK IGQPL+LL+K NPLV+ L LYD+ TPGV AD+SHM+T A V G GP
Sbjct: 43 FKVAVLGAAGGIGQPLSLLMKLNPLVSVLHLYDVVN-TPGVTADVSHMDTTAVVRGFLGP 101
Query: 332 EELSAAIKDADVVVIPAGVPRKPGMTRDDLFNTNASIVRDIALSIAQNAPKAIVAIITNP 511
+L AA+ D+V+IPAG+PRKPGMTRDDLFN NA IVR + +A+ P AIV +I+NP
Sbjct: 102 NQLEAALTGMDLVIIPAGLPRKPGMTRDDLFNKNAGIVRSLCEGVAKCCPNAIVNLISNP 161
Query: 512 VNSTVPIASEVLKKAGVYDPNRVLGVTTLDVVRAATFVGEINGVD 646
VNSTVPIA+EV KKAG YDP R+LGVTTLDV RA TFV E+ G+D
Sbjct: 162 VNSTVPIAAEVFKKAGTYDPKRLLGVTTLDVARANTFVAEVLGID 206
>08_02_0774 - 21047696-21048889
Length = 397
Score = 204 bits (497), Expect = 7e-53
Identities = 104/172 (60%), Positives = 128/172 (74%), Gaps = 1/172 (0%)
Frame = +2
Query: 119 AKNFSTTS-QRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYDIAPVTPGVAADLSHM 295
AK+ S S + ++K IGQPL LL+K +PLV+ L LYDIA V GVAADLSH
Sbjct: 64 AKSGSQISPEASYKVAVLGAAGGIGQPLGLLIKMSPLVSELHLYDIANVK-GVAADLSHC 122
Query: 296 NTPAKVSGHKGPEELSAAIKDADVVVIPAGVPRKPGMTRDDLFNTNASIVRDIALSIAQN 475
NTP++V GP EL+ +K DVVVIPAGVPRKPGMTRDDLFN NASIV+ + ++A N
Sbjct: 123 NTPSQVLDFTGPSELANCLKGVDVVVIPAGVPRKPGMTRDDLFNINASIVKSLVEAVADN 182
Query: 476 APKAIVAIITNPVNSTVPIASEVLKKAGVYDPNRVLGVTTLDVVRAATFVGE 631
P+A + II+NPVNSTVPIA+EVLK+ GVY+P ++ GVTTLDVVRA TFV +
Sbjct: 183 CPEAFIHIISNPVNSTVPIAAEVLKQKGVYNPKKLFGVTTLDVVRANTFVAQ 234
>01_06_1220 + 35493575-35494765
Length = 396
Score = 202 bits (494), Expect = 2e-52
Identities = 102/183 (55%), Positives = 130/183 (71%)
Frame = +2
Query: 83 ALKPAALAVQNGAKNFSTTSQRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYDIAPV 262
++ P + N + S + ++K IGQPL LL+K +PLV+ L LYDIA V
Sbjct: 55 SISPRIVPKANSGSHISP--EASYKVAVLGAAGGIGQPLGLLIKMSPLVSALHLYDIANV 112
Query: 263 TPGVAADLSHMNTPAKVSGHKGPEELSAAIKDADVVVIPAGVPRKPGMTRDDLFNTNASI 442
GVAADLSH NTP++V GP EL+ +K DVVVIPAGVPRKPGMTRDDLFN NASI
Sbjct: 113 K-GVAADLSHCNTPSQVLDFTGPSELANCLKGVDVVVIPAGVPRKPGMTRDDLFNINASI 171
Query: 443 VRDIALSIAQNAPKAIVAIITNPVNSTVPIASEVLKKAGVYDPNRVLGVTTLDVVRAATF 622
V+ + ++A N P+A + II+NPVNSTVPIA+EVLK+ GVY+P ++ GVTTLDVVRA TF
Sbjct: 172 VKTLVEAVADNCPEAFIHIISNPVNSTVPIAAEVLKQKGVYNPKKLFGVTTLDVVRANTF 231
Query: 623 VGE 631
+ +
Sbjct: 232 IAQ 234
>01_06_0072 +
26184592-26184828,26184934-26185107,26185591-26185759,
26185863-26185924,26186506-26186630,26186735-26186852,
26187760-26187897
Length = 340
Score = 202 bits (493), Expect = 2e-52
Identities = 104/187 (55%), Positives = 135/187 (72%), Gaps = 2/187 (1%)
Frame = +2
Query: 83 ALKPAALAVQNGAKNFSTTS-QRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYDIAP 259
+L +A V + +S+ S Q K IGQPL+LL+K NPLV+ L+LYDIA
Sbjct: 4 SLMRSASQVLRRRRGYSSASGQPERKVAILGAAGGIGQPLSLLMKLNPLVSSLSLYDIAG 63
Query: 260 VTPGVAADLSHMNTPAKVSGHKGPEELSAAIKDADVVVIPAGVPRKPGMTRDDLFNTNAS 439
TPGVAAD+SH+N PA+V G G ++L A++ +D+V+IPAGVPRKPGMTRDDLFN NA
Sbjct: 64 -TPGVAADVSHINAPAQVKGFMGDDQLGEALEGSDIVIIPAGVPRKPGMTRDDLFNINAG 122
Query: 440 IVRDIALSIAQNAPKAIVAIITNPVNSTVPIASEVLKKAGVYDPNRVLGVTTLDVVRAAT 619
IV+++ +IA+ P A+V +I+NPVNSTVPIA+EV KKAG YD ++ GVTTLDVVRA T
Sbjct: 123 IVKNLCTAIAKYCPNALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGVTTLDVVRAKT 182
Query: 620 F-VGEIN 637
F G+ N
Sbjct: 183 FYAGKAN 189
>05_07_0204 -
28397597-28397737,28398225-28398342,28399215-28399339,
28399683-28399744,28399867-28400035,28400594-28400767,
28400856-28401089
Length = 340
Score = 201 bits (490), Expect = 5e-52
Identities = 99/152 (65%), Positives = 122/152 (80%), Gaps = 1/152 (0%)
Frame = +2
Query: 185 IGQPLALLLKQNPLVTRLALYDIAPVTPGVAADLSHMNTPAKVSGHKGPEELSAAIKDAD 364
IGQPLALL+K NPLV+ L+LYDIA TPGVAAD+SH+N+PA V G G E+L A++ +D
Sbjct: 38 IGQPLALLMKLNPLVSSLSLYDIAG-TPGVAADVSHINSPALVKGFVGEEQLGEALEGSD 96
Query: 365 VVVIPAGVPRKPGMTRDDLFNTNASIVRDIALSIAQNAPKAIVAIITNPVNSTVPIASEV 544
VV+IPAGVPRKPGMTRDDLFN NA IV+ + +I++ P A+V +I+NPVNSTVPIA+EV
Sbjct: 97 VVIIPAGVPRKPGMTRDDLFNINAGIVKGLCTAISKYCPNALVNMISNPVNSTVPIAAEV 156
Query: 545 LKKAGVYDPNRVLGVTTLDVVRAATF-VGEIN 637
KKAG YD ++ GVTTLDVVRA TF G+ N
Sbjct: 157 FKKAGTYDEKKLFGVTTLDVVRAKTFYAGKAN 188
>02_01_0042 + 295608-296222,298479-298925
Length = 353
Score = 52.4 bits (120), Expect = 3e-07
Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 2/168 (1%)
Frame = +2
Query: 134 TTSQRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYDIAP-VTPGVAADLSHMNTPAK 310
T+ +R +G +A + + +AL D P G DL H
Sbjct: 33 TSHRRRLTKISVIGAGNVGMAIAQTILTRDMADEIALVDAVPDKLRGEMLDLQHAAAFLP 92
Query: 311 VSGHKGPEELSAAIKDADVVVIPAGVPRKPGMTRDDLFNTNASIVRDIALSIAQNAPKAI 490
+L A + +D+ ++ AG + PG +R +L N ++ R I ++A+++P+A+
Sbjct: 93 RVRLVSDTDL-AVTRGSDLAIVTAGARQIPGESRLNLLQRNVALFRKIVPALAEHSPEAL 151
Query: 491 VAIITNPVNSTVPIASEVLKKAGVYDPNRVLGV-TTLDVVRAATFVGE 631
+ I++NPV+ + + V K + +RV+G T LD R + E
Sbjct: 152 LLIVSNPVD----VLTYVAWKLSGFPASRVIGSGTNLDSSRFRFLLAE 195
>01_05_0564 +
23312419-23312987,23314652-23314751,23314832-23315055,
23315212-23316041,23316161-23316275,23316786-23316905,
23317410-23317450,23317546-23317595,23317684-23317719,
23317836-23317856
Length = 701
Score = 33.5 bits (73), Expect = 0.16
Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Frame = +2
Query: 287 SHMNTPAKVSGHKGPEELSAAIKDADVVVIPAGVPRK-PGMTRDDLFNTNASIVRDIALS 463
+H N P KV +GP A K+ VV G RK P +R+ +AS VR+ +
Sbjct: 264 NHQNRPQKVVRGRGPRRYEAVAKNNRDVV---GFQRKQPARSRESA--ASASAVRESGQT 318
Query: 464 IAQNAPKAIVAIITNPVNSTVPIASEVLKKAGVYDPN 574
+ NA + N VNS++ AS +G +P+
Sbjct: 319 L--NAQSEMAPPKKNVVNSSLNSASPPFYPSGASNPD 353
>08_02_1600 +
28133818-28133900,28134240-28134345,28135169-28135255,
28135354-28135438,28135510-28135691,28135921-28135991,
28136078-28136168,28136250-28136324,28136436-28136537,
28136620-28136742,28136823-28136891,28136990-28137058,
28137158-28137211,28137315-28137368
Length = 416
Score = 33.1 bits (72), Expect = 0.21
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = +2
Query: 353 KDADVVVIPAGVPRKPGMTRDDLFNTNASIVRDIALSIAQNAPKAI-VAIITNPVNSTVP 529
+DA+ ++ PR PGM R L + N I + ++ A + + V ++ NP N+
Sbjct: 148 EDAEWALLIGAKPRGPGMERSALLDINGQIFAEQGKALNSVASRNVKVIVVGNPCNTNAL 207
Query: 530 IASEVLKKAGVYDPNRVLGVTTLDVVRA 613
I LK A +T LD RA
Sbjct: 208 IC---LKNAPNIPAKNFHALTRLDENRA 232
>04_03_0684 -
18670697-18670933,18671003-18671102,18671214-18671266,
18671664-18671810,18671901-18672031,18673064-18673088,
18673201-18673305,18673941-18674054,18674900-18674992,
18675101-18675193,18675951-18676057,18676442-18676490,
18677140-18677253,18677728-18677787,18677887-18677955,
18679154-18679255,18679338-18679366,18679450-18679732,
18680399-18680752
Length = 754
Score = 33.1 bits (72), Expect = 0.21
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 5/114 (4%)
Frame = +2
Query: 293 MNTPAKVSGHKGPEELSAAIKDADVVVIPAGVPRKPGMTRDDLFNTNASIVRDIALSIAQ 472
+ T + G+KG E +K V+ + PG+TR + + + I I I Q
Sbjct: 119 LETDKEAGGNKGVSEKQIRLKIFSPNVLDITLVDLPGITRVPVGDQPSDIESRIRSMIMQ 178
Query: 473 --NAPKAIVAIITNPVNSTVPIASEVLKKAGVYDP--NRVLGV-TTLDVVRAAT 619
P I+ +T P N+ + S+ L+ A + DP +R +GV T LD++ T
Sbjct: 179 YIKHPSCIILAVT-PANADL-ANSDALQLAKLADPDGSRTIGVITKLDIMDRGT 230
>04_04_0587 + 26410808-26411338
Length = 176
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -3
Query: 251 CRIKPAWSPEDSASVEGPKAGRYHRRHQRP 162
CR KPA SP A++ P GR RR +RP
Sbjct: 3 CRAKPASSPPSRAALAAP--GRCRRRRRRP 30
>06_03_0019 +
15506702-15506896,15507741-15507875,15508264-15508501,
15508652-15508855,15508945-15509111
Length = 312
Score = 30.3 bits (65), Expect = 1.5
Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Frame = +2
Query: 185 IGQPLALLLKQNPLVTRLALYDIAPVTPGVAADLSHMNTPAK--VSGHK-GPEELSAAIK 355
IG+ + + +T + + D AP P AA L V G G + L AAIK
Sbjct: 20 IGRYIVAASAREDHLTSVLVRDPAPADPAKAAVLQGFRDSGATLVKGDLYGHQSLVAAIK 79
Query: 356 DADVVVIPAGVPRKPGMTR 412
ADVV+ G + TR
Sbjct: 80 SADVVISAVGYAQLADQTR 98
>10_06_0120 -
10979458-10979665,10979909-10980585,10981315-10981538,
10981763-10982136,10982203-10982786
Length = 688
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +1
Query: 307 QGQRPQGT*GAISSHQRC*CCSHPSRSTP*TGND 408
Q +RPQGT A+ SH C CS+ S GND
Sbjct: 268 QEKRPQGTVKALDSHVTCEVCSNTGHS----GND 297
>05_04_0057 + 17543016-17543312
Length = 98
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 90 NLPPLLYKMVQRTFPPHHRGTLKWWSLVP 176
++P L+ V R PP RG +WW L P
Sbjct: 39 SVPSLVEVEVDRCGPPGRRGGRRWWLLCP 67
>05_03_0485 +
14608663-14608989,14609265-14609535,14609720-14609830,
14609870-14610423
Length = 420
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +1
Query: 313 QRPQGT*GAISSHQRC*CCSHPSRSTP*TGND 408
+RPQGT A+ SH C C H S GND
Sbjct: 137 KRPQGTVQALDSHVTCEVCDHTGHS----GND 164
>10_03_0046 + 7357777-7357992
Length = 71
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +1
Query: 160 GGRWCRRWY-RPAFGPSTEAESSGDQAGF 243
GG RRW+ RPA G STE S + GF
Sbjct: 25 GGDGLRRWWCRPASGRSTERVSGREVGGF 53
>07_03_0730 + 21030123-21030338
Length = 71
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +1
Query: 160 GGRWCRRWY-RPAFGPSTEAESSGDQAGF 243
GG RRW+ RPA G STE S + GF
Sbjct: 25 GGDGLRRWWCRPASGRSTERVSGREVGGF 53
>04_01_0527 - 6913266-6913802
Length = 178
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Frame = -3
Query: 335 PQVPCGR*PWLGCSCGKG---RLRRRGSQALCRIKPA--WSPEDSASVEGPKAGRYHRRH 171
P++ C + + S G R RRR + CR P SPE S + HRRH
Sbjct: 79 PRLLCAKADTIAVSARLGHPVRRRRRAHRRQCRPSPPPPLSPEPSTAAVAEPPAAAHRRH 138
Query: 170 Q 168
Q
Sbjct: 139 Q 139
>01_06_1064 + 34237919-34238155
Length = 78
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +1
Query: 160 GGRWCRRWY-RPAFGPSTEAESSGDQAGF 243
GG RRW+ RPA G STE S + GF
Sbjct: 25 GGDGLRRWWCRPASGRSTERVSGREVGGF 53
>08_02_1015 - 23597445-23597628,23597654-23597877
Length = 135
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -3
Query: 236 AWSPEDSASVEGPKAGRYHRRHQRPPL*SSSVMW 135
AW+ ED+A + + G + RPP SS V W
Sbjct: 2 AWTVEDAAISDELRRGAWMTERTRPPPLSSDVAW 35
>08_02_0114 +
12754155-12754370,12754792-12755340,12755410-12755512,
12755552-12756060
Length = 458
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +1
Query: 313 QRPQGT*GAISSHQRC*CCSHPSRSTP*TGND 408
+RPQGT A+ SH C CS ST +GND
Sbjct: 152 KRPQGTVKALDSHVTCEVCS----STGHSGND 179
>06_03_1473 -
30382528-30382731,30382814-30382930,30383048-30383129,
30383211-30383278,30383444-30383545,30383994-30384122,
30384561-30384623,30384781-30384897,30385210-30386116,
30386225-30386494,30386929-30386998,30387114-30387273
Length = 762
Score = 28.3 bits (60), Expect = 6.0
Identities = 25/96 (26%), Positives = 33/96 (34%)
Frame = -2
Query: 573 FGSYTPAFLSTSEAIGTVELTGFVMMATIALGAF*AMDKAMSRTMEALVLNRSSRVIPGL 394
FG + F + S GT E +++ +LG MD S S+ V GL
Sbjct: 233 FGYHVTNFFAVSSRSGTPEDLKYLVDKAHSLGLRVLMDVVHSHA--------SNNVTDGL 284
Query: 393 RGTPAGMTTTSASLMAADSSSGPLWPLTLAGVFMWE 286
G G T + D LW L WE
Sbjct: 285 NGYDVGQNTHESYFHTGDRGYHKLWDSRLFNYANWE 320
>06_01_1114 -
9179614-9180167,9180223-9180544,9181524-9181820,
9181991-9182878,9182896-9182941,9182964-9183350,
9183648-9183985
Length = 943
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 313 QRPQGT*GAISSHQRC*CCSHPSRS 387
+RPQGT A+ SH C C + S S
Sbjct: 198 KRPQGTVKALDSHVTCEVCGNTSHS 222
>05_06_0098 + 25560158-25560925
Length = 255
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = +2
Query: 218 NPLVTRLALYDIAPVTPGVAADLSHMNTPAKVSGHKGPEELSAAIKDADVVVIPAGVPRK 397
+P V ++PVTP VA + +PA S PEE +AAI + P+ +
Sbjct: 163 SPSVLDFPSLALSPVTPLVADPFNR--SPASASSSASPEEEAAAIAQKGFFLHPSPRSAE 220
Query: 398 P 400
P
Sbjct: 221 P 221
>04_04_0928 + 29472658-29472772,29473198-29473304,29473441-29473497
Length = 92
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = -2
Query: 369 TTSASLMAADSSSGPLWPLTLAGVFMWERSAATPGVTGAMSY 244
T S SL A+ SSS PL P+ + + ER A P +SY
Sbjct: 17 TISVSLAASPSSSHPLRPVASSVNLVMERVAKRPRGFAFLSY 58
>03_02_0568 + 9514715-9514944,9515174-9515300,9515529-9515684,
9515765-9516102,9516191-9516329,9517083-9517152,
9517201-9517307,9517387-9517437,9517549-9517660,
9517783-9517869,9517958-9518133,9518479-9518586,
9518654-9518812,9518888-9518971,9519053-9519258,
9519565-9519666,9519768-9519877,9519963-9520114,
9520380-9520548,9520841-9520878,9521963-9522571,
9523314-9523784,9523786-9523871,9524396-9524906,
9525388-9525412,9526001-9526051,9526228-9526301,
9526412-9526534,9526667-9526738,9526924-9527020,
9527174-9527283
Length = 1649
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +1
Query: 220 SSGDQAGFIRHSACDPRRRSRPFPHEHPSQGQR 318
+S D A F HS+C R P P QGQR
Sbjct: 985 ASPDAAAFAVHSSCSRALRMGPKPFAGTPQGQR 1017
>02_04_0005 -
18843061-18843201,18843309-18843440,18844457-18845315,
18845884-18845973,18846748-18846869,18846950-18847049,
18847151-18847205,18847275-18847365,18847453-18847572,
18847681-18847780,18847890-18848018,18848099-18848201,
18848670-18848743,18848848-18848933,18849297-18849358,
18849454-18849541,18849937-18850029
Length = 814
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/37 (45%), Positives = 17/37 (45%)
Frame = +3
Query: 555 RECTTRTACSASPLWT*SALPPSSARSMAWTRPPCRP 665
R TT T S S S PP SA S A T PP P
Sbjct: 595 RRSTTTTTTSGSECDEYSITPPRSAASRAITLPPPPP 631
>02_02_0442 - 10318576-10319109
Length = 177
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
Frame = -3
Query: 335 PQVPCGR*PWLGCSCGKG---RLRRRGSQALCRIKP--AWSPEDSASVEGPKAGRYHRRH 171
P++ C + + S G R RRR + R P + SPE S + G HRRH
Sbjct: 78 PRLLCAKADTIAASARLGHPVRRRRRAHRRRRRPSPPPSLSPEPSTAAVGEPPAAAHRRH 137
Query: 170 Q 168
Q
Sbjct: 138 Q 138
>01_01_0772 - 5999333-5999881,6001105-6001315,6001791-6001858
Length = 275
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 248 RIKPAWSPEDSASVEGPKAGRYHRRHQR 165
R+ PAW+PE+ A +E G Y RH R
Sbjct: 109 RLSPAWTPEEDACLERLARG-YGFRHWR 135
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,423,393
Number of Sequences: 37544
Number of extensions: 532472
Number of successful extensions: 1860
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1850
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1721314888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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