Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0034
(343 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_02_0098 + 5286827-5287019,5287380-5287476,5287872-5287992,528... 30 0.55
05_04_0357 + 20602830-20602848,20604210-20604250,20605770-206065... 29 0.72
07_03_1730 - 29099262-29099807 29 0.95
04_01_0208 + 2596110-2596928 29 1.3
07_03_1005 + 23249040-23249228,23250453-23250574,23250654-232508... 28 1.7
04_04_1371 + 32995337-32995358,32995745-32995822,32995876-329960... 28 2.2
10_08_0974 + 21969713-21971914 27 2.9
01_06_1453 - 37465665-37466627 27 2.9
07_01_0925 - 7771465-7772195,7772284-7772431,7773706-7774317 27 3.9
11_06_0177 + 20936072-20937550 27 5.1
09_06_0096 - 20840855-20841994 27 5.1
08_02_0313 - 15659600-15659716,15660376-15660495,15660581-156606... 27 5.1
06_01_1201 + 10332105-10332168,10333054-10333571 27 5.1
05_01_0158 - 1067721-1067827,1067951-1068008,1068276-1068334,106... 27 5.1
02_04_0192 + 20795659-20796309 27 5.1
11_06_0221 - 21387365-21387652,21387892-21389952,21390360-21390395 26 6.7
09_02_0318 - 7191763-7191879,7192375-7192494,7192568-7192666,719... 26 6.7
04_04_1372 + 33008740-33009130,33009485-33011544 26 6.7
03_04_0243 + 19298293-19299117 26 6.7
09_04_0748 + 19901687-19902460 26 8.9
07_01_0114 + 848050-848137,848253-848449 26 8.9
04_04_1635 - 34943881-34945233,34945321-34945524 26 8.9
>10_02_0098 +
5286827-5287019,5287380-5287476,5287872-5287992,
5288458-5288511,5288868-5288918,5289004-5289099,
5289709-5289807,5289989-5290111,5290666-5290809,
5290902-5290973,5291053-5291128,5291208-5291350,
5291453-5291561,5291629-5291816,5292045-5292134,
5292256-5292438,5293187-5293360,5293466-5293537
Length = 694
Score = 29.9 bits (64), Expect = 0.55
Identities = 19/77 (24%), Positives = 29/77 (37%)
Frame = +3
Query: 96 GPPDHPASADRIQSLFNDIELYPTKTQVFEMLVCARQCARRKSLTLTFGEFCVFAAELRR 275
G P P +I+S+ N + K +VF + R L FGE +
Sbjct: 376 GKPVQPEDLRKIESIVN--QQIKDKLEVFAREIKLADAKRINGLRAVFGEIYPDPVRVVS 433
Query: 276 CSRQARQVXSKPESPXW 326
R+ + + PES W
Sbjct: 434 VGRKVEDLLANPESKEW 450
>05_04_0357 +
20602830-20602848,20604210-20604250,20605770-20606519,
20606603-20606834,20607412-20607491,20607981-20608106
Length = 415
Score = 29.5 bits (63), Expect = 0.72
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -1
Query: 319 GDSGLLXTCLACLEHRRSSAANTQNSPNVRVSDLRRAHCRAHT 191
GD G +H + AN ++ N+ S LRR+HC ++
Sbjct: 78 GDHGSPVFLRYAQDHASNGYANAKSGTNITKSSLRRSHCNQNS 120
>07_03_1730 - 29099262-29099807
Length = 181
Score = 29.1 bits (62), Expect = 0.95
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -3
Query: 125 IGRCWMIGRPHAALPSARNLLCEAGSSIADRG-GDG 21
+ R W+ RP A P R L ++ S+ AD G GDG
Sbjct: 124 LDRWWLSARPPATCPLCRCRLLQSPSAAADDGDGDG 159
>04_01_0208 + 2596110-2596928
Length = 272
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -3
Query: 131 DAIGRCWMIGRPHAALPSARNLLCEAGSSIADRGGDGG 18
D+ GR W G LP+ L C ADRG GG
Sbjct: 86 DSGGRRWNSGGNATVLPARTRLRCFPAKRRADRGRGGG 123
>07_03_1005 +
23249040-23249228,23250453-23250574,23250654-23250800,
23250932-23250998,23251763-23251836,23252010-23252102,
23253433-23253550,23254340-23254402,23254774-23254806,
23255325-23255399
Length = 326
Score = 28.3 bits (60), Expect = 1.7
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +1
Query: 7 RSVGPPSPPRSAMLLPASQRRLRALGSAA 93
R +GPP PP S +L AS R RA +AA
Sbjct: 26 RLLGPPPPPASPLLSSASARFPRAPCNAA 54
>04_04_1371 + 32995337-32995358,32995745-32995822,32995876-32996019,
32997595-32997930,32998014-32998166,32998286-32998501,
32998600-33000695
Length = 1014
Score = 27.9 bits (59), Expect = 2.2
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +1
Query: 82 GSAAWGLPIIQHLPIASRAYSTTSNCIPLRHRYSRCWYAHDSVRVANRSLSHSENSAC 255
G W L + L + S AY+ S CIP ++ Y DS + + S S+ + C
Sbjct: 895 GLIPWQLTKLSSLAVFSVAYNNLSGCIPNSGQFGT--YGMDSYQGNSNLRSMSKGNIC 950
>10_08_0974 + 21969713-21971914
Length = 733
Score = 27.5 bits (58), Expect = 2.9
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +1
Query: 19 PPSPPRSAMLLPASQRRLRALGSAAWGLPIIQHLPIASRAY 141
PP PPR A+L P RLRA S++ L LP R +
Sbjct: 2 PPPPPRRALLAPL--LRLRAFSSSSSSLAHHPPLPPPPRRH 40
>01_06_1453 - 37465665-37466627
Length = 320
Score = 27.5 bits (58), Expect = 2.9
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +3
Query: 42 DATSSLTKEVASAWECRVGPPDHPASAD 125
D+ S + S EC +G PDH S D
Sbjct: 283 DSLDSFPDDAMSLHECMIGAPDHDWSVD 310
>07_01_0925 - 7771465-7772195,7772284-7772431,7773706-7774317
Length = 496
Score = 27.1 bits (57), Expect = 3.9
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = +1
Query: 19 PPSPPRSAMLLPASQRRLRALGSAAWGLPIIQHLPIASRAYSTTS 153
PP PPR A LP Q R G A G + + R TS
Sbjct: 42 PPPPPRVAKSLPREQPGGRGSGRGAEGSASASPVAVGDREGKKTS 86
>11_06_0177 + 20936072-20937550
Length = 492
Score = 26.6 bits (56), Expect = 5.1
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Frame = +1
Query: 49 LPASQRRLRALGSAAWGLPIIQHLPIASRAY-STTSNCIPL--RHRYSRCWYAHDSVRVA 219
+PA + RAL A +G I +P+ + Y S SN +P R R D VR
Sbjct: 136 VPALRNIQRALDEAGYGKRIKATVPVNADVYDSPASNPVPSAGRFRDDVAGTMADMVRFL 195
Query: 220 NRS 228
NRS
Sbjct: 196 NRS 198
>09_06_0096 - 20840855-20841994
Length = 379
Score = 26.6 bits (56), Expect = 5.1
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1
Query: 10 SVGPPSPPRSAMLLPASQRRLR 75
+ GPP PPR+ L P RR R
Sbjct: 351 AAGPPLPPRTVSLHPTRWRRWR 372
>08_02_0313 -
15659600-15659716,15660376-15660495,15660581-15660679,
15660802-15660913,15661025-15661128,15661316-15661495,
15661612-15661881,15662529-15662825,15663432-15663677
Length = 514
Score = 26.6 bits (56), Expect = 5.1
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = -1
Query: 238 NVRVSDLRRAHCRAHTSISNTCVLVGYNSMSLNR 137
N R+ D+ ++C +++IS VL +NS SLNR
Sbjct: 114 NYRLIDIPVSNC-LNSNISKIYVLTQFNSASLNR 146
>06_01_1201 + 10332105-10332168,10333054-10333571
Length = 193
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 13 VGPPSPPRSAMLLPASQRRLRALGSAAW 96
VGPPS R+ + + +LRAL S W
Sbjct: 142 VGPPSAERAVLTANHQRHQLRALFSFPW 169
>05_01_0158 -
1067721-1067827,1067951-1068008,1068276-1068334,
1069009-1069087,1069177-1069233,1069531-1069580,
1069805-1069886,1070431-1070487,1070741-1070828,
1071171-1071247,1071325-1071443,1071719-1071950
Length = 354
Score = 26.6 bits (56), Expect = 5.1
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -3
Query: 113 WMIGRPHAAL-PSARNLLCEAGSSIADRGGDGG 18
WMIGR H AL PS ++ + R G+GG
Sbjct: 26 WMIGRGHVALPPSPGRYPAVTVAAASRRTGEGG 58
>02_04_0192 + 20795659-20796309
Length = 216
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 19 PPSPPRSAMLLPASQRRLRALGSAAWG 99
PP PP + P +RR R L S+A G
Sbjct: 8 PPPPPPATTATPRRRRRRRLLPSSAGG 34
>11_06_0221 - 21387365-21387652,21387892-21389952,21390360-21390395
Length = 794
Score = 26.2 bits (55), Expect = 6.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 42 DATSSLTKEVASAWECRVGPPDHPASA 122
D TSS + +S W+ V PP P +A
Sbjct: 394 DGTSSGSLSASSRWDFEVSPPPPPMAA 420
>09_02_0318 -
7191763-7191879,7192375-7192494,7192568-7192666,
7192846-7192957,7193058-7193161,7193341-7193520,
7193611-7193880,7194364-7194660,7195283-7195477
Length = 497
Score = 26.2 bits (55), Expect = 6.7
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -1
Query: 238 NVRVSDLRRAHCRAHTSISNTCVLVGYNSMSLNR 137
N R+ D+ ++C ++++S VL +NS SLNR
Sbjct: 97 NYRLIDIPVSNC-LNSNVSKIYVLTQFNSASLNR 129
>04_04_1372 + 33008740-33009130,33009485-33011544
Length = 816
Score = 26.2 bits (55), Expect = 6.7
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +1
Query: 82 GSAAWGLPIIQHLPIASRAYSTTSNCIPLRHRYSRCWYAHDSVRVANRSLSHSENSAC 255
G+ W L + L + S Y+ S CIP ++ + DS + N SE S C
Sbjct: 717 GAIPWQLTRLSSLSVFSVMYNNLSGCIPNSGQFGS--FDMDSYQGNNLLHPASEGSEC 772
>03_04_0243 + 19298293-19299117
Length = 274
Score = 26.2 bits (55), Expect = 6.7
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +1
Query: 22 PSPPRSAMLLPASQRRLR 75
PS PRSA LLP RR R
Sbjct: 223 PSTPRSATLLPRQPRRWR 240
>09_04_0748 + 19901687-19902460
Length = 257
Score = 25.8 bits (54), Expect = 8.9
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 81 WECRVGPPDHPASADRIQSLFNDIEL 158
W +VGP +PA D + F+ +EL
Sbjct: 201 WFIKVGPGPYPAYFDLVMKQFDGLEL 226
>07_01_0114 + 848050-848137,848253-848449
Length = 94
Score = 25.8 bits (54), Expect = 8.9
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 10 SVGPPSPPRSAMLLPASQRRLRALGSAAW 96
S+ +PPR A A ++R R +AAW
Sbjct: 55 SMDAAAPPRHAAAAAAGRKRRRPAATAAW 83
>04_04_1635 - 34943881-34945233,34945321-34945524
Length = 518
Score = 25.8 bits (54), Expect = 8.9
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 37 SAMLLPASQRRLRALGSAAWGLPIIQHLPIASRAYSTTSNCIP 165
SA L PA +L A A+G P+++ + ++ TSN +P
Sbjct: 288 SASLAPAIMEKLEA----AFGAPVVEAYAMTEASHLMTSNPLP 326
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,019,749
Number of Sequences: 37544
Number of extensions: 217739
Number of successful extensions: 960
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 960
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 482105440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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